; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G04310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G04310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein TAB2 homolog, chloroplastic
Genome locationClcChr09:3440118..3442965
RNA-Seq ExpressionClc09G04310
SyntenyClc09G04310
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR009472 - Tab2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10428.1 DUF1092 domain-containing protein [Cucumis melo var. makuwa]1.1e-20394.46Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSKP  S FSQSIKTAN FSA+GRI+QQPLRRF+SNSVSESSVSVPEE ELNED DDPTLE+AYLDSETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSL+LQYTKYFPNNVINSITLRDAISSI EELGVPLPEK RFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+IDD+TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_004135937.1 protein TAB2 homolog, chloroplastic [Cucumis sativus]7.3e-20393.93Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTLGGLHF KSKP  S FSQSIKTAN FSA+GRI+QQPL RFRSNSVSESSV+ PEE ELNED DDPTLE+AYLDSETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDA+SSI EELGVPLP+KIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGIEIDD+TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRA LILSVGIATRYVYATYKKTPVT+AEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_008461309.1 PREDICTED: uncharacterized protein LOC103499936 [Cucumis melo]1.3e-20494.99Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSKP  S FSQSIKTAN FSA+GRI+QQPLRRF+SNSVSESSVSVPEE ELNED DDPTLE+AYLDSETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+IDD+TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_022959769.1 protein TAB2 homolog, chloroplastic [Cucurbita moschata]1.1e-19591.6Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAE--LNEDVDDPTLELAYLDSETDPESITEWE
        MATLSFNPTRIRT GGLH  K KP    FSQSIKT   FSA  RINQQ LRRFRSNSVSESS+SVPEE E  ++ED DDPTLELAYLDSETDPESITEWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAE--LNEDVDDPTLELAYLDSETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG+KPIPSKRCLSLLLWLEE
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING
        RYETVY RHPGFQKGSKPLLALDNPFPMELP+NLFGERWAFVQLPFSAVQEEVSNL  +FMFGSSLDLDLLGIEIDD TMIPGLSVA+SRAQPLAAW+NG
Subjt:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        MEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_038900264.1 protein TAB2 homolog, chloroplastic [Benincasa hispida]1.1e-20696.04Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTLGGLHF KSKPS S FSQSIKT N FSASGRINQQPLRRFRSNSVSESSVS PEE ELNED DDPTLELAYLD+ TDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEID++TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

TrEMBL top hitse value%identityAlignment
A0A0A0K8A7 Uncharacterized protein3.5e-20393.93Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTLGGLHF KSKP  S FSQSIKTAN FSA+GRI+QQPL RFRSNSVSESSV+ PEE ELNED DDPTLE+AYLDSETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDA+SSI EELGVPLP+KIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGIEIDD+TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRA LILSVGIATRYVYATYKKTPVT+AEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A1S3CEE7 uncharacterized protein LOC1034999366.4e-20594.99Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSKP  S FSQSIKTAN FSA+GRI+QQPLRRF+SNSVSESSVSVPEE ELNED DDPTLE+AYLDSETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+IDD+TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A5A7UYM5 DUF1092 domain-containing protein6.4e-20594.99Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSKP  S FSQSIKTAN FSA+GRI+QQPLRRF+SNSVSESSVSVPEE ELNED DDPTLE+AYLDSETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAISSI EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+IDD+TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A5D3CGT0 DUF1092 domain-containing protein5.5e-20494.46Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD
        MATLSFNPTRIRTL GLHF KSKP  S FSQSIKTAN FSA+GRI+QQPLRRF+SNSVSESSVSVPEE ELNED DDPTLE+AYLDSETDPESITEWELD
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSL+LQYTKYFPNNVINSITLRDAISSI EELGVPLPEK RFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME
        ETVY RHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEE+SNLKETFMFGSSLDLDLLGI+IDD+TMIPGLSVATSRAQPLAAW+NGME
Subjt:  ETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGME

Query:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A6J1H921 protein TAB2 homolog, chloroplastic5.5e-19691.6Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAE--LNEDVDDPTLELAYLDSETDPESITEWE
        MATLSFNPTRIRT GGLH  K KP    FSQSIKT   FSA  RINQQ LRRFRSNSVSESS+SVPEE E  ++ED DDPTLELAYLDSETDPESITEWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAE--LNEDVDDPTLELAYLDSETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELG+KPIPSKRCLSLLLWLEE
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING
        RYETVY RHPGFQKGSKPLLALDNPFPMELP+NLFGERWAFVQLPFSAVQEEVSNL  +FMFGSSLDLDLLGIEIDD TMIPGLSVA+SRAQPLAAW+NG
Subjt:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        MEVYSVEADTSRACLILSVGI+TRYVYATYKK PVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

SwissProt top hitse value%identityAlignment
B4FTR7 Protein TAB2 homolog, chloroplastic1.4e-13562.37Show/hide
Query:  GLHFRKSKP----------SLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAEL-NEDVD-----DPTLELAYLDSETDPESITEWEL
        GL  R+S P          S+S  ++ +  A         + +  RR RS S SESS      A++ +E+V+     DP  E+ YLD + DPESI EWEL
Subjt:  GLHFRKSKP----------SLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAEL-NEDVD-----DPTLELAYLDSETDPESITEWEL

Query:  DFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEER
        DFCSRPILD RGKKVWELV CD +LSLQ+T+YFPNN INS+TLRDA++S++E LGVP+P+++RFFRSQMQTIIT+AC +LG+K +PS+RC+SLLLWLEER
Subjt:  DFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEER

Query:  YETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGM
        YE VY RHPGFQ G++PLLALDNPFP  LPENLFG++WAFVQLPFSAV+EEV +L+  + FG+ LDL+LLG E+DD T++PG++V +SRA+PLAAW+NG+
Subjt:  YETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGM

Query:  EVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        E+ ++EADT RA LILS G++TRYVY+ Y+KT  +T EAEAWEAAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Subjt:  EVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Q6K9C1 Protein TAB2 homolog, chloroplastic2.8e-13366.77Show/hide
Query:  RFRSNSVSESSVSVPEEAELNEDVD---------DPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITL
        R RS S   S+ +  + A+  E+V          DP  E+ YLD E D E I EWELDFCSRPILD RGKKVWELV CD +LSLQ+T++FPN  INS+TL
Subjt:  RFRSNSVSESSVSVPEEAELNEDVD---------DPTLELAYLDSETDPESITEWELDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITL

Query:  RDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQL
        RDA++S+   LGVPLP++ RFFRSQMQTII++AC ELG+K +PS+RC+SLLLWLEERYETVY RHPGFQ G+KPLL LDNPFP  LPENLFG++WAFVQL
Subjt:  RDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQL

Query:  PFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWE
        PFSAV+EEV +L+  + FG+ LDLDLLG E+D+ T+IPG++V +SRA+PLAAW+NG+E+ S+E DT RA LILS G++TRYVYA Y+K+  TT EAEAWE
Subjt:  PFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGMEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWE

Query:  AAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        AAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Subjt:  AAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Q9SFB3 Protein TAB2 homolog, chloroplastic7.0e-15672.7Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDV--DDPTLELAYLDSETDPESITEWE
        MATL FN  RI+T          P  SSF++ IKT + FS+   + +    RF S S+ ESS+S+ +E E+  +V  DDPT EL+YLD E+D +SI EWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDV--DDPTLELAYLDSETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILD RGKK+WELV CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC EL IK +PSKRCLSL LWL+E
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING
        RY+TVY RHPGFQKGS PLL+LDNPFPM LPENLFGE+WAFVQLP+SAV+EE+S+  E F+FG+SLDLDLLGIE+D+ T+IPGLSVATSRA+PLAAW+NG
Subjt:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        +EV S+EAD+S+ CLILSVGIATRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQDDLDS+DCVGFWLL+DLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Arabidopsis top hitse value%identityAlignment
AT3G08010.1 RNA binding4.9e-15772.7Show/hide
Query:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDV--DDPTLELAYLDSETDPESITEWE
        MATL FN  RI+T          P  SSF++ IKT + FS+   + +    RF S S+ ESS+S+ +E E+  +V  DDPT EL+YLD E+D +SI EWE
Subjt:  MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDV--DDPTLELAYLDSETDPESITEWE

Query:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE
        LDFCSRPILD RGKK+WELV CD SLSLQ TKYFPNNVINSITL+DAI +IT++LGVPLPEKIRFFRSQMQTIITKAC EL IK +PSKRCLSL LWL+E
Subjt:  LDFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEE

Query:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING
        RY+TVY RHPGFQKGS PLL+LDNPFPM LPENLFGE+WAFVQLP+SAV+EE+S+  E F+FG+SLDLDLLGIE+D+ T+IPGLSVATSRA+PLAAW+NG
Subjt:  RYETVYMRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWING

Query:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        +EV S+EAD+S+ CLILSVGIATRYVYATYKKTPVTT EAEAWE+AKK  GGLHFLAIQDDLDS+DCVGFWLL+DLPPPPV
Subjt:  MEVYSVEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCTTAAGCTTCAACCCCACCAGAATAAGAACCCTAGGTGGGCTTCATTTTCGCAAATCCAAACCTAGTTTGTCGTCATTTTCACAATCGATCAAAACCGCAAA
CAGCTTCTCAGCCAGTGGCCGTATCAATCAGCAACCACTACGTCGTTTTCGATCAAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGCGGAATTGAACGAGG
ATGTGGATGACCCGACCTTGGAGTTGGCATATTTGGATTCGGAAACCGATCCGGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCCAGACCTATATTGGACATCAGA
GGGAAGAAGGTGTGGGAGCTTGTAGCCTGTGATAATTCGCTCTCGCTTCAATACACGAAGTATTTTCCTAACAATGTCATTAATAGCATTACTTTGAGAGACGCGATTTC
CTCAATTACTGAAGAGTTGGGGGTACCATTACCAGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCA
TTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATACGAGACCGTTTATATGCGTCATCCAGGTTTTCAGAAAGGATCTAAGCCCCTCCTTGCATTA
GATAATCCATTTCCAATGGAACTTCCAGAGAACCTTTTCGGGGAGAGGTGGGCATTTGTCCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGAAAC
GTTCATGTTTGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATTGATGATGAGACAATGATCCCAGGGTTGTCTGTTGCAACTTCACGGGCTCAACCATTGGCAG
CTTGGATAAATGGAATGGAAGTATATTCAGTCGAAGCCGATACGTCTCGTGCTTGTTTGATTCTATCCGTGGGGATCGCAACTCGATATGTCTACGCTACCTATAAAAAA
ACGCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCCAAAAAGGCTTGTGGAGGCTTGCATTTTCTTGCCATTCAAGACGACTTGGATTCAGAAGACTGTGTTGG
ATTCTGGCTTCTACTAGACTTGCCGCCGCCGCCAGTATAA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTCTTCTTCTTCGAAGGACGATAAATAACATGAGCTTTTTTAAGGTTGAGAATTGAGAGAGCCCAACTTTCCAGAAAGTATATTTTGTGGCGGAAAAATAACTAA
CAAAACTTGCTCTCACTCTCTCAACTCACAAAGCTTATCTTACTGAGGGAGCTCCTCTTCCATGGCGACCTTAAGCTTCAACCCCACCAGAATAAGAACCCTAGGTGGGC
TTCATTTTCGCAAATCCAAACCTAGTTTGTCGTCATTTTCACAATCGATCAAAACCGCAAACAGCTTCTCAGCCAGTGGCCGTATCAATCAGCAACCACTACGTCGTTTT
CGATCAAATTCTGTATCGGAAAGCTCGGTTTCGGTGCCGGAAGAGGCGGAATTGAACGAGGATGTGGATGACCCGACCTTGGAGTTGGCATATTTGGATTCGGAAACCGA
TCCGGAGAGCATTACGGAGTGGGAGCTGGATTTCTGCTCCAGACCTATATTGGACATCAGAGGGAAGAAGGTGTGGGAGCTTGTAGCCTGTGATAATTCGCTCTCGCTTC
AATACACGAAGTATTTTCCTAACAATGTCATTAATAGCATTACTTTGAGAGACGCGATTTCCTCAATTACTGAAGAGTTGGGGGTACCATTACCAGAGAAAATCCGCTTC
TTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGTACCGAGCTTGGCATAAAGCCCATTCCTAGTAAAAGGTGTCTTTCCCTGCTTTTGTGGCTGGAAGAGCGATA
CGAGACCGTTTATATGCGTCATCCAGGTTTTCAGAAAGGATCTAAGCCCCTCCTTGCATTAGATAATCCATTTCCAATGGAACTTCCAGAGAACCTTTTCGGGGAGAGGT
GGGCATTTGTCCAATTGCCCTTTTCAGCTGTTCAAGAGGAGGTCTCAAACTTAAAGGAAACGTTCATGTTTGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATT
GATGATGAGACAATGATCCCAGGGTTGTCTGTTGCAACTTCACGGGCTCAACCATTGGCAGCTTGGATAAATGGAATGGAAGTATATTCAGTCGAAGCCGATACGTCTCG
TGCTTGTTTGATTCTATCCGTGGGGATCGCAACTCGATATGTCTACGCTACCTATAAAAAAACGCCAGTGACAACTGCTGAGGCTGAAGCTTGGGAAGCAGCCAAAAAGG
CTTGTGGAGGCTTGCATTTTCTTGCCATTCAAGACGACTTGGATTCAGAAGACTGTGTTGGATTCTGGCTTCTACTAGACTTGCCGCCGCCGCCAGTATAATCGGTGAAG
TGGTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MATLSFNPTRIRTLGGLHFRKSKPSLSSFSQSIKTANSFSASGRINQQPLRRFRSNSVSESSVSVPEEAELNEDVDDPTLELAYLDSETDPESITEWELDFCSRPILDIR
GKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAISSITEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYMRHPGFQKGSKPLLAL
DNPFPMELPENLFGERWAFVQLPFSAVQEEVSNLKETFMFGSSLDLDLLGIEIDDETMIPGLSVATSRAQPLAAWINGMEVYSVEADTSRACLILSVGIATRYVYATYKK
TPVTTAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV