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Clc09G04500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G04500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:3603082..3603884
RNA-Seq ExpressionClc09G04500
SyntenyClc09G04500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595145.1 hypothetical protein SDJN03_11698, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1071.83Show/hide
Query:  MAISGTSKISIVLVLAVVAIFSAVASAQEA----PAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
        MAISGTS +  V+V A+VA+FSAVASAQE+    PAPAP LDRGAA +LPAA  M LLFASFFLSLPAL K
Subjt:  MAISGTSKISIVLVLAVVAIFSAVASAQEA----PAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
KGN45142.1 hypothetical protein Csa_015584 [Cucumis sativus]4.0e-1177.05Show/hide
Query:  SKISIVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
        SKIS V+ LA+VA+FSA+ SAQEAPAPAP LDRGAASSLP A  M LLFASFF SLPAL K
Subjt:  SKISIVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
TrEMBL top hitse value%identityAlignment
A0A0A0K9T6 Uncharacterized protein2.0e-1177.05Show/hide
Query:  SKISIVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
        SKIS V+ LA+VA+FSA+ SAQEAPAPAP LDRGAASSLP A  M LLFASFF SLPAL K
Subjt:  SKISIVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTTCCGGCACTTCCAAGATCTCCATCGTGCTCGTTCTCGCCGTCGTGGCTATCTTCTCAGCCGTCGCTTCCGCTCAGGAAGCTCCAGCCCCGGCGCCGGAGCT
CGACCGAGGAGCAGCGTCGTCTCTGCCTGCTGCGGTGTTCATGCCTCTGCTCTTTGCTTCCTTCTTCCTCTCTCTTCCTGCACTTTTCAAGCCCTAA
mRNA sequenceShow/hide mRNA sequence
CCGACTCACAATTTCCAGAATTCACACACATTCCTTTTCTTCTCTTAAGTAATTTCTTTCACTTTCAATGGCGATTTCCGGCACTTCCAAGATCTCCATCGTGCTCGTTC
TCGCCGTCGTGGCTATCTTCTCAGCCGTCGCTTCCGCTCAGGAAGCTCCAGCCCCGGCGCCGGAGCTCGACCGAGGAGCAGCGTCGTCTCTGCCTGCTGCGGTGTTCATG
CCTCTGCTCTTTGCTTCCTTCTTCCTCTCTCTTCCTGCACTTTTCAAGCCCTAAATTAAATCCATCGCGGATCGTTCATTTATATACGTTTATTAATTATTATCATTTTA
TATTTAGAGCTTTATTTGATCGGAAAATTATAATAATAATAATAATAATAAAATGAGATCTCTACAATCTCTTTAGGTTTATTTGTTCATTGTTAGCGATCTGTATTTGC
TGTATAATTATTTTTAGTGTGATTTATTATTATTAATAACAATAGACTTTGGTTCTTTCTATTTCAATTTTGGACTTCACAGTCAGTGTTTGGACAAATTAAAATTATGA
TTATTAATAATTTAAAGTGAGAAAATGGGATTAACTTAGATTTCAGTTACGTGGGAATTTATATTTATTTAATTAAGGTTATAAATAGGTCAAATTATAAAAATATGAAT
GTGGATACCAGAGTTTATGGAATCAAATGGATTGGAACGTAAAGTTTGAATTATGAAGTGAATTATTAAATTAGAAATATTGGTAAAAAGGGGTATCTTTTGAAACAATT
TATACCACAATTTTGTTTGAGATTGCGTCTCTT
Protein sequenceShow/hide protein sequence
MAISGTSKISIVLVLAVVAIFSAVASAQEAPAPAPELDRGAASSLPAAVFMPLLFASFFLSLPALFKP