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Clc09G05110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein NIM1-INTERACTING 1
Genome locationClcChr09:4038855..4039533
RNA-Seq ExpressionClc09G05110
SyntenyClc09G05110
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058541.1 protein NIM1-INTERACTING 1 [Cucumis melo var. makuwa]5.7e-3066.67Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP
        MENEK+QP  ER AEE  E E EMERFFALVR+FKEMRD+R KEL +GEEEE    EKRRKRMK  + VENRSTWIPKFEREDFDEEFQ    AL LP+P
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP

Query:  -CNLVKE---------DTAAAMKKKKKVKNGDECLDLNLTL
         CNL K           T AAMK KK+VKNG+  LDLNL L
Subjt:  -CNLVKE---------DTAAAMKKKKKVKNGDECLDLNLTL

KGN45045.1 hypothetical protein Csa_015768 [Cucumis sativus]2.3e-3168.31Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEE--EEEIAA-EKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALIL
        MEN KLQP  +  AE+  E E EMERFFALVR+ KEMRD+RRKEL IG+E  EEEIAA EKRRKRM+ AE VENRSTWIPKFEREDFDEEFQ    + + 
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEE--EEEIAA-EKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALIL

Query:  PKP-CNLVKEDTAAA-------MKKKKKVKNGDECLDLNLTL
        P P CNLVK DT AA       MK KKKVKNGD  LDLNL L
Subjt:  PKP-CNLVKEDTAAA-------MKKKKKVKNGDECLDLNLTL

XP_022991628.1 uncharacterized protein LOC111488189 [Cucurbita maxima]3.2e-3367.16Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP
        MEN+K QPPRE IAEEEEE E+EME+F+ALVRNFKE+RDR RKE++ G E +E AAEK RKRMKT E V+N+S+WI +FEREDFDE+ Q  G A+ LPK 
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP

Query:  CNLVKEDT---AAAMKKKKKVKNGDECLDLNLTL
        C LVKEDT   AA +KK+KKV +G +CLDLNL+L
Subjt:  CNLVKEDT---AAAMKKKKKVKNGDECLDLNLTL

XP_023547822.1 uncharacterized protein LOC111806674 [Cucurbita pepo subsp. pepo]2.6e-3063.77Show/hide
Query:  MENEKLQPPRERIAEEEE---EVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALIL
        MEN+K QPPR  IAEEEE   E E+EME F+ALVRNFKE+RDR RKE++ G E  E AAEK RKRMKT E  +N+S+WI +FEREDFDE+ Q  G A+ L
Subjt:  MENEKLQPPRERIAEEEE---EVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALIL

Query:  PKPCNLVKEDTAAA----MKKKKKVKNGDECLDLNLTL
        PK C LVKEDT  A    MKK+KKV +G +CLDLNL+L
Subjt:  PKPCNLVKEDTAAA----MKKKKKVKNGDECLDLNLTL

XP_038898983.1 protein NIM1-INTERACTING 1-like [Benincasa hispida]4.1e-4481.29Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTA-EAVENRSTWIPKFEREDFDEEFQGRGPALILP-
        MENEKLQP  ERIAEEEEE EMEM  FFALVRNFKEMRDRRRKELMIGEEEE  A EKRRKRMK+A EAVENRSTWIPKFEREDFDEEFQ RG   ILP 
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTA-EAVENRSTWIPKFEREDFDEEFQGRGPALILP-

Query:  KPCNLVKEDTA------AAMKKKKKVKNGDECLDLNLTL
        KP NLVKEDT+      AAMKKKK VKNGD+CLDLNL L
Subjt:  KPCNLVKEDTA------AAMKKKKKVKNGDECLDLNLTL

TrEMBL top hitse value%identityAlignment
A0A0A0K5V7 Uncharacterized protein1.1e-3168.31Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEE--EEEIAA-EKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALIL
        MEN KLQP  +  AE+  E E EMERFFALVR+ KEMRD+RRKEL IG+E  EEEIAA EKRRKRM+ AE VENRSTWIPKFEREDFDEEFQ    + + 
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEE--EEEIAA-EKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALIL

Query:  PKP-CNLVKEDTAAA-------MKKKKKVKNGDECLDLNLTL
        P P CNLVK DT AA       MK KKKVKNGD  LDLNL L
Subjt:  PKP-CNLVKEDTAAA-------MKKKKKVKNGDECLDLNLTL

A0A5A7UYI4 Protein NIM1-INTERACTING 12.8e-3066.67Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP
        MENEK+QP  ER AEE  E E EMERFFALVR+FKEMRD+R KEL +GEEEE    EKRRKRMK  + VENRSTWIPKFEREDFDEEFQ    AL LP+P
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP

Query:  -CNLVKE---------DTAAAMKKKKKVKNGDECLDLNLTL
         CNL K           T AAMK KK+VKNG+  LDLNL L
Subjt:  -CNLVKE---------DTAAAMKKKKKVKNGDECLDLNLTL

A0A6J1DAZ5 protein NIM1-INTERACTING 13.6e-3063.77Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKEL--MIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILP
        MENE L+P     A EEEE EM+ME FFAL+RNFKEMRDRRRKEL  MIG+  E    EK+RK+MKTA      STWIP F REDFDE+FQ RGP  +LP
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKEL--MIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILP

Query:  KPCNLVKEDT-----AAAMKKKKKVKNGDECLDLNLTL
        KPCNL+KEDT      AA+ KKK +KN +ECLDLNL L
Subjt:  KPCNLVKEDT-----AAAMKKKKKVKNGDECLDLNLTL

A0A6J1H831 protein NIM1-INTERACTING 17.8e-2557.64Show/hide
Query:  MENEKLQPPRERIA--------EEEEEVEMEMERFFALVRNFKEMRDRRRKELMIG-EEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGR
        ME + L+   +R+A        + EEE EM+ME FFALVRNFKEMRD+RRKELMIG + E+  AAE R+++MKT   VENRS WIP+FEREDFDEEFQ R
Subjt:  MENEKLQPPRERIA--------EEEEEVEMEMERFFALVRNFKEMRDRRRKELMIG-EEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGR

Query:  GPALILPKPCNLVKEDTAAA----MKKKKKVKNGDECLDLNLTL
        GPA          KE+ AAA     KKKKKVKN ++ LDLNL+L
Subjt:  GPALILPKPCNLVKEDTAAA----MKKKKKVKNGDECLDLNLTL

A0A6J1JVD5 uncharacterized protein LOC1114881891.6e-3367.16Show/hide
Query:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP
        MEN+K QPPRE IAEEEEE E+EME+F+ALVRNFKE+RDR RKE++ G E +E AAEK RKRMKT E V+N+S+WI +FEREDFDE+ Q  G A+ LPK 
Subjt:  MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKP

Query:  CNLVKEDT---AAAMKKKKKVKNGDECLDLNLTL
        C LVKEDT   AA +KK+KKV +G +CLDLNL+L
Subjt:  CNLVKEDT---AAAMKKKKKVKNGDECLDLNLTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02450.1 NIM1-interacting 17.5e-0432.2Show/hide
Query:  EEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKPCNLVKEDTAAAMKK
        +EEEE E +++ FF L+++++E R RRR+EL       E +   RRK    +   E     +P F+ EDF +   G  P L+     +  +E+T    ++
Subjt:  EEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKPCNLVKEDTAAAMKK

Query:  -KKKVKNGDECLDLNLTL
         + + +N D+ LDLNL L
Subjt:  -KKKVKNGDECLDLNLTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACGAGAAACTGCAGCCGCCGCGGGAGAGAATCGCCGAGGAAGAGGAGGAGGTGGAGATGGAGATGGAGAGGTTTTTCGCTTTGGTGAGGAATTTCAAGGAAAT
GCGTGATCGGCGGAGGAAGGAGTTGATGATCGGGGAGGAGGAGGAGGAAATCGCGGCGGAGAAGAGGAGGAAGAGGATGAAGACGGCGGAAGCGGTGGAGAATCGGTCGA
CTTGGATTCCGAAGTTCGAGAGAGAGGATTTCGATGAGGAATTTCAGGGGAGAGGGCCGGCTTTGATTCTTCCGAAGCCTTGTAATCTTGTTAAAGAAGACACCGCGGCG
GCGATGAAGAAGAAAAAGAAAGTGAAAAATGGAGATGAGTGTTTGGATCTTAATCTCACTCTCTAG
mRNA sequenceShow/hide mRNA sequence
AAAAAATAAAAGAAAAGAAACGCAAACAGCATGTGAAACTTTTTCAAATTTTATTTATATTATATTATAATTTACACGGAGAATTGGTAAATTGAAGAGAGTTTTTGATT
ATTTTCTGAAGAGTAATGGAAAACGAGAAACTGCAGCCGCCGCGGGAGAGAATCGCCGAGGAAGAGGAGGAGGTGGAGATGGAGATGGAGAGGTTTTTCGCTTTGGTGAG
GAATTTCAAGGAAATGCGTGATCGGCGGAGGAAGGAGTTGATGATCGGGGAGGAGGAGGAGGAAATCGCGGCGGAGAAGAGGAGGAAGAGGATGAAGACGGCGGAAGCGG
TGGAGAATCGGTCGACTTGGATTCCGAAGTTCGAGAGAGAGGATTTCGATGAGGAATTTCAGGGGAGAGGGCCGGCTTTGATTCTTCCGAAGCCTTGTAATCTTGTTAAA
GAAGACACCGCGGCGGCGATGAAGAAGAAAAAGAAAGTGAAAAATGGAGATGAGTGTTTGGATCTTAATCTCACTCTCTAGTTTCTTTTTTCTTTTCTATTTGGTACACA
AGAATTTAATCTGAATTTGAAAGAATGAATAGAGAGTTTACAGTTTTAGGGGAAATTTTGTTTTTTTTTTCTTTTAACTTTAGAAATATCCATTTTTCACCTAATATTTG
TTTTTATAGCTAATTCTCC
Protein sequenceShow/hide protein sequence
MENEKLQPPRERIAEEEEEVEMEMERFFALVRNFKEMRDRRRKELMIGEEEEEIAAEKRRKRMKTAEAVENRSTWIPKFEREDFDEEFQGRGPALILPKPCNLVKEDTAA
AMKKKKKVKNGDECLDLNLTL