CuGenDBv2

Gene ID	Clc09G05480
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Small COPII coat GTPase SAR1
Genome location	ClcChr09:4314754..4319941
RNA-Seq Expression	Clc09G05480
Synteny	Clc09G05480
Gene Ontology terms	GO:0003400 - regulation of COPII vesicle coating (biological process) GO:0070863 - positive regulation of protein exit from endoplasmic reticulum (biological process) GO:0005794 - Golgi apparatus (cellular component) GO:0030127 - COPII vesicle coat (cellular component) GO:0070971 - endoplasmic reticulum exit site (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR006687 - Small GTPase superfamily, SAR1-type IPR006689 - Small GTPase superfamily, ARF/SAR type IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

ERN03097.1 hypothetical protein AMTR_s00003p00037810 [Amborella trichopoda]

2.0e-17

93.75

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Query:  SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        S++ RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

KAF3654711.1 GTP-binding protein SAR1B [Capsicum annuum]

2.0e-17

97.83

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS
        RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK+S
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS

RWW72074.1 hypothetical protein BHE74_00020149 [Ensete ventricosum]

1.1e-18

80.65

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Query:  RTIRLHEL--EIVHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        +T  LH L  E+V  F++ LVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RTIRLHEL--EIVHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

TQD91752.1 hypothetical protein C1H46_022594 [Malus baccata]

9.2e-18

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Query:  VHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        V+SF  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  VHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

XP_020521218.1 GTP-binding protein SAR1A [Amborella trichopoda]

2.0e-17

93.75

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Query:  SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        S++ RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

TrEMBL top hits

e value

%identity

Alignment

A0A2P6RFR3 Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase

1.3e-17

97.83

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS
        RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK S
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS

A0A540LZR2 Uncharacterized protein

4.4e-18

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Query:  VHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        V+SF  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  VHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

A0A5B6WUM9 GTP-binding protein SAR1B

1.7e-17

97.83

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS
        RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK S
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS

A0A6G1BI54 Uncharacterized protein

9.9e-18

97.83

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS
        RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK+S
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS

W1NZQ9 Uncharacterized protein

9.9e-18

93.75

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Query:  SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        S++ RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

SwissProt top hits

e value

%identity

Alignment

O04266 GTP-binding protein SAR1A

3.9e-19

97.73

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

O04267 GTP-binding protein SAR1B

3.9e-19

97.73

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

O04834 GTP-binding protein SAR1A

3.9e-19

97.73

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

P52885 GTP-binding protein SAR1

1.0e-19

100

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

Q01474 GTP-binding protein SAR1B

3.9e-19

97.73

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

Arabidopsis top hits

e value

%identity

Alignment

AT1G09180.1 secretion-associated RAS super family 1

1.2e-18

93.18

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKI FKAFDLGGHQIARRVWKD YAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

AT1G56330.1 secretion-associated RAS 1B

2.7e-20

97.73

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

AT3G62560.1 Ras-related small GTP-binding family protein

2.7e-20

97.73

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

AT4G02080.1 secretion-associated RAS super family 2

2.7e-20

97.73

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Query:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
        RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Subjt:  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK

Sequences

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CDS sequence

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ATGAGAACAATTCGATTACATGAGCTGGAAATCGTTCATAGCTTTATTCTGAGGTTAGTACAACATCAGCCAACACAGTATCCTACATCAGAGGAGTTGAGCATCGGAAA
AATTAAGTTTAAGGCGTTTGATTTGGGAGGTCACCAGATTGCTCGTAGAGTTTGGAAGGACTACTATGCTAAGGCAAGCTAA

mRNA sequence

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CCTCGAAATATACATTAAAAAAAAAAAAAAGGAGAAAATTCCATTCCATTCCATTGCATTCGATTTCCAACTCCAATTTCCAACCAGGTTTTGGAAGTTCCGTAGTTGTG
AATTTTTCTTTCTCTAGCCTGCCCTTCTGCTGAGGATTCTCTTCTCAATCCGAGTGACAAACCCAAACAATCGGCGAGCTCGTTGTTGCTGGTGCCGACTCTGATCGATT
CTCGGACCCCTTCTTTCACCGGTATCCTCGATTATGTTTCTTGTCGACTGGTTCTATGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCT
TGGCCTCGATAATGCCGGAAAGACCACCTTGCTCCACATGTTGAAAGATGAGAACAATTCGATTACATGAGCTGGAAATCGTTCATAGCTTTATTCTGAGGTTAGTACAA
CATCAGCCAACACAGTATCCTACATCAGAGGAGTTGAGCATCGGAAAAATTAAGTTTAAGGCGTTTGATTTGGGAGGTCACCAGATTGCTCGTAGAGTTTGGAAGGACTA
CTATGCTAAGGCAAGCTAATTCTGCATACTCTTGTCTTTCTCTTATGTTAATGGGGTGTATGTTTTAAAGGGAGTTTAAAAAATATATTCATTTCAGATGATTATTCACA
TGAATTAGATGCAAATTTACAGGAACATTTGACTAAGCGGGTAAGGGCCATGGTTCCTGTGGTTTTGTAGCTTGATTCAGTATGGGACTTTTTTGGAAGGATATTCAACA
TTTAATTATGTTTTTGGCATTTTAGGGCACAATTTGAGAATTCTTCTCTGTGTTTATCAAGCAAGATAAAATTGTATATGGTAACTTTTTTCCTCGTGAAATTTGAAGAT
GAAATAAGAACCTTGTTTGATAATTATTTTTGTTTCAAGAAAAACTCGAATATCAAGAAAAGCACAGATTTAATTGATGTTCATTTTGATAAAATATATTTAATATTTCT
GTTTCATTCTCAAGTTTTAGGATTTGTATGAACCTTGACATAGGAAACTTGGGAGCATATTCTTTTACATCCAAGATTTAAACTTGAGGTTCTTGACTGATACTTTTTCA
CCTAGGCATATCAATTCCAACTCTTTCCTACTGTTTTGTACTTTTGTGCTGAGATGCCTCTACTGCATTTTGTATCTTCTGATCTTCCTTCCATTTGTTCCCCAATACAT
ATTACTTTTATGAAGTGATCGATTTTTATGTTCAAGACAAAAGAAGTGAAATAAGCTCTCTGGGAGAGCTTTATAAGAGCGTACTGCTGGACCATTTGGCTAGAGAGGAA
GAGGAGGATTTCTTGGATGAGAATCTTCCCTATCACCGTTTTGTTTAGGTCTCCCCTTCTCCACTCCAATTGGAGAGGTCTTTTGTAATCCGCCACATGGGGTTTTCCTC
ATTTATAATTTCATACTATCAATGAAATTGTTTCTTACCTAAAAGAAATTTTGTGTTCAAGACTAGTCTAGTCCAGAGAAATCTGATCATAACAATCACGATGTAATAGC
TAGACTAAGAATGACTAACCAATCCAGTAGAATTTAACAGAAATAATTTATTTTGTGTGTCATGTAGCTTGAGGGGTGGCAGATAAGTTAGAATTGAGGAAAGAAAAGGG
AATCCCAATTTTGTATTATTTGGGAATGATTCAGCTGAAATGGCTTAGGACAGCTACTGGAGAAGTGATTGCAACCCTTGGAATAAAAATGTTTCAAGAAGACAAGATGG
AAAGGGGGGTCAATATGATTTCAGAAACTTTTCTAACAAAAGAGGGTGGAGCTTAGAAATGTTTACTTCGTCAAATTAATGTGAGAGGAGAAGCTTGGTCATTTCAGCTG
GACAAAATCACAATGGATGGATTGGAGTCCCTTTCTTTTATTGGGCGCTTCTTGTTTGGCAACACCCTTGTATATTCTTTCTTGCTTCTCTAAGAAAGCTTGGTTTTCTG
GTTAGGAAAAAAAAAAGAGATAGAAGTCCTTTCTGAAATTATTGAACGACTTCCTCTCTAATGCTGAAGGTAAATGAAAGGATGAGATTGTAAATGGAGGTAATTAATCA
TATGTTGATGTGGTTGTAAAGGGAAGAGCAAAGATATTGTCTGGAGTCGGAGGTTTGATAGGGTGACTTATGAGAGAGCAATTATTCTTACCAATTTATGTTTCCATGTA
ATTGGTATTTGGTATGACATTTAAATTACTAATAAGGATTGTTTGCTAAACTGTAAATCCGTTCCAGCTAGACGAGACCTTGCTCTGGTGTACTAGTGTAGATGAAGCAA
GAACTCTGTGCAGCAGTGGAGGCTTGTCTCAAGAGTGGGCAAGTTTTTATGTCAATTGCAAGTGGCGGGATAGATATAAACATAGTAGAGCCAAAGTCGTTCCATTCTTG
GTGGCTGGATTAAACTGGGGGAGCTACCCATTGTCTTCCTGGAACAAGGCAATGATCGGAAATAAATGTGTGGGTTCAATATTTGAGAGGCTTGCAGTGAAGCAACAGAA
CTATTCTGGATTCATTCTTGCGGAAATTAAGGGAGTAGGTGCTAGTGGTTGTGTTCTTAACGTTCCATGGTACGGTGCTTTCCCCTAGGTCGCTTCTGACAAGGAGATTG
CCGGAAGTTCAAAATGTTTTCCAAAGGAAGCTGCGGTCAGGTTATATGATCCCAATGAGTGCCCTTGTCCGACAGACTGATAATAGTAAAGTTGGATTGAGCTGGATAAA
AGATTCAGGAAAATTGGAAATAATAGAAAAAGTTCAAAAAATGTTGGCCGTTAAAGGTAGAAGGCATGCGGATGATTCGGAGGGATCTTAACCTTGTGGACTAAAAAAGA
AAGTCGTTTGGTGGTTTCATAAAGGGGCTTCTTTCTGTTACAAATAAAAATATAAAATGTGAGTTAGGGGATGGTAAATTGCTTGGATCTTGAACATTAATGGTCCACTA
TCATGTATTCTGGTGGTTGAGGCCAGAGGGGGACAATTTTAATATAGTACTTTGGTCAAACGAAAAATCAAACAGGAAAGAAAAACATGTTCTATGGATAAATATTGTGA
AATTATTTAGTGTCGTCCTTGTCAAACTATTGATAATCTAGATTGATTGAAATTCCTCCTAACCATGGATATTTTTACACAGTCCAATGTGATTGCCATTACTTGACAAG
TATTATAGTTTGTTTGGAATGTCTTTTCAAGTGTTTAAAAATAGATTTTAAGTGTAAAAAAATGGTTTTTAATTATTTAAAAAGCCATTTCAAACAAGCTATAAGTTTGG
ATGGAGAAGTTCAGGAAACTAAGAGTGATAAAGGACCTGGAGTAACATATGACCGTGCATCTATTCTGCTGAGACCAGGAAATCTAAAATGGGGACCAAACAACACCTTT
CTGTTTCGGAATCTCCTTGGTGTTGGTTATCAAAACCAACTTGTTCACTCAGTTCTTTATATGTCAATTTTTGTAACCCGAAGGAGTCTGGCTCTGAAGTTTGAGAAATA
GATGATGAACTTCATCTGGGATAATAACAAAGGAAGACAATTGCCAGTTTGGTAAGGTCGATGCCGTGGTATACCTGGTGGATGCCTATGATAAAGAGAGATTTGCAGAA
TCCAAAAAAGAACTTGACGCCCTCCTTTCAGATGAATCACTTGCAAACGTCCCGTTTCTCGTGTTGGGGAACAAGATTGACATACCCTACGCCGCCTCAGAGGATGAATT
ACGATACCACCTTGGCCTAACCAACTTCACCACTGGAAAGGGAAAGGTTAACCTAGCAGACACAAACGTCCGCCCGTTGGAGGTGTTCATGTGCAGCATCGTCCGGAAAA
TGGGGTATGGCGATGGCTTCAAGTGGCTTTCTCAATACATTAAGTAGGTGATAGTCTGCTAATGCATCACAGGTCATGATTGCCATGGCACACTCCATAGTAGCCAGAAG
TTGCATTAGGTGCACATGTACTGTTGGTTCCATGTGGTCTGTAAAATTTGTGTATCAATAGTTTGTTTATTGGCCATTCCATGAGATTGGTATATGTATGCATTTCTTTT
CTAGATTCAGCCAGCAGAATTTTCCTTTTTCTAGAAAATGTAAGACTTGAAAGCAATACAGCCTATGTGGTTTGTTTTGGGTATAAAATGTTTGGTTTTTGAATGTGAAG
CCAGGAGGATCTCCACA

Protein sequence

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MRTIRLHELEIVHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS

Clc09G05480 (gene) of Watermelon (cordophanus) v2 genome