; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G05520 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05520
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMultidrug resistance protein ABC transporter family protein, putative
Genome locationClcChr09:4325345..4326671
RNA-Seq ExpressionClc09G05520
SyntenyClc09G05520
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014321.1 hypothetical protein SDJN02_24498, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-7178.28Show/hide
Query:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR
        MGN+TSVSGVGKVVLS+GSI EFNEP TVAELMLEHPR VVVE+  STV   KRPTPLPAD KLD KKVYMMLPIRGGKP SLSSEEIRRV++CANSALR
Subjt:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR

Query:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        SRSLLLSSSKVLPW ARA +ATT   TTT     ++KK+D   I GEE RW  EM M AEGRPEYLSRQLSG+ WKPSLDTIKEKKFEKK SHWLF F
Subjt:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

XP_004135994.1 uncharacterized protein LOC101221516 [Cucumis sativus]7.4e-8286.43Show/hide
Query:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL
        MGN+TS VSGVGKVVLS+GSIQEFNEPFTVAELMLEHPRQVVVEI KSTV VGKRPTPLPADEKL+S KVYMMLPIRGGKPASLSSE+IRRVL+CANSAL
Subjt:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL

Query:  RSRSLLLSSSKVLPWFARACTATTTTI-TTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        RSRSLLLSSSKVLPWFARACTATTTT  TTTR+ RA+ KKE D+VK+EGEE  WE     EGRPEYLSRQLSGRGWKPSLDTIKEKKFEKK SHWLF F
Subjt:  RSRSLLLSSSKVLPWFARACTATTTTI-TTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

XP_008451489.1 PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo]5.1e-8387.94Show/hide
Query:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL
        MGN+TS VSGVGKVVLS+GSIQEFNEPFTVAELMLEHPRQVVVEI KSTV VGKRPTPLPADEKL+S KVYMMLPIRGGKPASLSSE+IRRVL+CANSAL
Subjt:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL

Query:  RSRSLLLSSSKVLPWFARACTATTT-TITTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        RSRSLLLSSSKVLPWFARACTATTT T TTTR+ RAEIKKE D+VK+EGEE  WE    AEGRPEYLSRQLSGRGWKPSLDTIKEKK EKK SHWLFNF
Subjt:  RSRSLLLSSSKVLPWFARACTATTT-TITTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

XP_022953412.1 uncharacterized protein LOC111455974 [Cucurbita moschata]6.9e-7278.28Show/hide
Query:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR
        MGN+TSVSGVGK+VLSDGSI EFNEP TVAELMLEHPR VVVE+  S V   KRPTPLPAD KLD KKVYMMLPIRGGKP SLSSEEIRRV++CANSALR
Subjt:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR

Query:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        SRSLLLSSSKVLPW ARA +ATT   TTT     ++KK+DL  I GEE RW  EM M AEGRPEYLSRQLSG+ WKPSLDTIKEKKFEKK SHWLF F
Subjt:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

XP_038899617.1 uncharacterized protein LOC120086875 [Benincasa hispida]5.3e-8888.27Show/hide
Query:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR
        MGN+T VSG+G+VVLSDGSIQ+FNEPFT AELMLEHPRQVVVEICKST+ + KR TPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVL+CANSALR
Subjt:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR

Query:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        SRSLLLSSSKVLPWFARA  AT+ TITTTR+ + EIKKEDLVKIEGEEDRWE EM AEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKK+SHWLFNF
Subjt:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

TrEMBL top hitse value%identityAlignment
A0A0A0K6C6 Uncharacterized protein3.6e-8286.43Show/hide
Query:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL
        MGN+TS VSGVGKVVLS+GSIQEFNEPFTVAELMLEHPRQVVVEI KSTV VGKRPTPLPADEKL+S KVYMMLPIRGGKPASLSSE+IRRVL+CANSAL
Subjt:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL

Query:  RSRSLLLSSSKVLPWFARACTATTTTI-TTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        RSRSLLLSSSKVLPWFARACTATTTT  TTTR+ RA+ KKE D+VK+EGEE  WE     EGRPEYLSRQLSGRGWKPSLDTIKEKKFEKK SHWLF F
Subjt:  RSRSLLLSSSKVLPWFARACTATTTTI-TTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

A0A1S3BSP6 uncharacterized protein LOC1034927632.5e-8387.94Show/hide
Query:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL
        MGN+TS VSGVGKVVLS+GSIQEFNEPFTVAELMLEHPRQVVVEI KSTV VGKRPTPLPADEKL+S KVYMMLPIRGGKPASLSSE+IRRVL+CANSAL
Subjt:  MGNITS-VSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSAL

Query:  RSRSLLLSSSKVLPWFARACTATTT-TITTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        RSRSLLLSSSKVLPWFARACTATTT T TTTR+ RAEIKKE D+VK+EGEE  WE    AEGRPEYLSRQLSGRGWKPSLDTIKEKK EKK SHWLFNF
Subjt:  RSRSLLLSSSKVLPWFARACTATTT-TITTTRDARAEIKKE-DLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

A0A6J1DD99 uncharacterized protein LOC1110199773.7e-7176.53Show/hide
Query:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR
        MGN TS SG GKVVLSDGS+QE NE  T AELMLEHPRQVVVEIC ST+  GKRPT LPADEKLD KKVY+MLPIRGGKPASLSSEEIRR+L+C NS LR
Subjt:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR

Query:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
          SL  SSSKVLPWFAR C  TTTT TT   A  ++KK D ++  GEE+RWE EM AEGRPEYLSRQ SGRGWKPSLDTIKEKKFEKK SHWLF F
Subjt:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

A0A6J1GN59 uncharacterized protein LOC1114559743.3e-7278.28Show/hide
Query:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR
        MGN+TSVSGVGK+VLSDGSI EFNEP TVAELMLEHPR VVVE+  S V   KRPTPLPAD KLD KKVYMMLPIRGGKP SLSSEEIRRV++CANSALR
Subjt:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR

Query:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        SRSLLLSSSKVLPW ARA +ATT   TTT     ++KK+DL  I GEE RW  EM M AEGRPEYLSRQLSG+ WKPSLDTIKEKKFEKK SHWLF F
Subjt:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

A0A6J1JQZ4 uncharacterized protein LOC1114881131.4e-7077.27Show/hide
Query:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR
        MGN+TSVSGVGKVVLSDGSI EFNEP TVAELMLEHPR VVVE+  STV   KRPTPLPAD KLD KKVYMMLPIRGGKP SLSSEEIR VL+CANSALR
Subjt:  MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALR

Query:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF
        SRSLLLSSSKVLPW ARA +ATT  +        ++KK+D   I GEE RW  EM M AEGRPEYLSRQLSG+ WKPSLDTIKEKKFEKK SHWLF F
Subjt:  SRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRW--EMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02090.1 unknown protein9.1e-3043.75Show/hide
Query:  GKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVD-------VGKRPTPLPADEKLDSKKVYMMLPIR--GGKPAS-----LSSEEIRRVLVCAN
        GKVVLSDG +Q   E  TVAE+MLE+P+ VVVE   S++        V ++  PLPAD+ L+  K+Y++LP +  GG+ A      L+SEE+R++L  A 
Subjt:  GKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVD-------VGKRPTPLPADEKLDSKKVYMMLPIR--GGKPAS-----LSSEEIRRVLVCAN

Query:  SALRSRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKK
        + +RS         +LPWF            TTR  +      D V       R E EM  E RPE+LSRQLSGRGWKPSLD I+EKK +KK
Subjt:  SALRSRSLLLSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACATCACCTCCGTCTCTGGCGTCGGAAAAGTTGTTCTCTCCGACGGTTCCATCCAAGAATTCAACGAGCCGTTCACAGTGGCCGAGTTGATGCTCGAA
CACCCACGCCAAGTTGTCGTCGAGATCTGCAAAAGTACTGTCGACGTTGGAAAACGGCCGACCCCGTTGCCTGCAGACGAAAAGCTCGACTCGAAGAAGGTTTAT
ATGATGCTACCTATAAGAGGAGGCAAGCCAGCATCATTGTCGTCGGAGGAAATCCGGCGTGTTCTTGTATGTGCCAACTCGGCTTTACGGTCGCGCTCTCTCCTC
CTTTCGTCTTCTAAGGTTCTTCCTTGGTTTGCAAGGGCATGCACAGCAACAACTACGACGATAACGACGACGAGAGACGCCCGAGCAGAGATTAAAAAGGAAGAT
CTTGTGAAGATCGAAGGCGAGGAAGATCGATGGGAAATGGAGATGGTGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCA
AGCTTGGATACAATTAAGGAGAAGAAATTTGAGAAGAAATTTTCTCATTGGTTGTTCAACTTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAATTTTCACCAAATCCCTTCGTTGTTGACCAGATCTCAAGAAACCCGACATGATCATCAATTCCTTCATCCCTTTCTCTTCAACAAAACAAACTTGCTTTAAA
CTCAAACCTCAACCACTCGATCATCTAAATTTTCACCACCATTATCACCAAAAATTATAAGCTTCCCCGTTATAATTAATGGAGCTGTTCAACAAACTCCGATCC
TTTCCCCAACTCTAACATTGATCCTCTTCTTATTCCTTCCTCTCCTTTCTCCTCCTTCTCACCTCAACTTCCGATCATTTTCCGATGGGCAACATCACCTCCGTC
TCTGGCGTCGGAAAAGTTGTTCTCTCCGACGGTTCCATCCAAGAATTCAACGAGCCGTTCACAGTGGCCGAGTTGATGCTCGAACACCCACGCCAAGTTGTCGTC
GAGATCTGCAAAAGTACTGTCGACGTTGGAAAACGGCCGACCCCGTTGCCTGCAGACGAAAAGCTCGACTCGAAGAAGGTTTATATGATGCTACCTATAAGAGGA
GGCAAGCCAGCATCATTGTCGTCGGAGGAAATCCGGCGTGTTCTTGTATGTGCCAACTCGGCTTTACGGTCGCGCTCTCTCCTCCTTTCGTCTTCTAAGGTTCTT
CCTTGGTTTGCAAGGGCATGCACAGCAACAACTACGACGATAACGACGACGAGAGACGCCCGAGCAGAGATTAAAAAGGAAGATCTTGTGAAGATCGAAGGCGAG
GAAGATCGATGGGAAATGGAGATGGTGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACAATTAAGGAG
AAGAAATTTGAGAAGAAATTTTCTCATTGGTTGTTCAACTTTTGAAGCCATTTGGAAACATTATATTACATGTGCATTATTATTATTATTAACAAGGTTTCATAT
ATTAACGAAAATATTTGGAGAAAATAGAGTTAATATAGAATGTTA
Protein sequenceShow/hide protein sequence
MGNITSVSGVGKVVLSDGSIQEFNEPFTVAELMLEHPRQVVVEICKSTVDVGKRPTPLPADEKLDSKKVYMMLPIRGGKPASLSSEEIRRVLVCANSALRSRSLL
LSSSKVLPWFARACTATTTTITTTRDARAEIKKEDLVKIEGEEDRWEMEMVAEGRPEYLSRQLSGRGWKPSLDTIKEKKFEKKFSHWLFNF