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Clc09G05660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGATA transcription factor 15-like
Genome locationClcChr09:4472237..4473416
RNA-Seq ExpressionClc09G05660
SyntenyClc09G05660
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]4.6e-4466.86Show/hide
Query:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNN-----NS
        MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+N     N+
Subjt:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNN-----NS

Query:  NGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
        N   NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  NGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

XP_008451515.1 PREDICTED: GATA transcription factor 15-like [Cucumis melo]4.2e-4566.47Show/hide
Query:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------NN
        MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K         NN
Subjt:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------NN

Query:  NNNSNGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
        NNN+N   NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  NNNSNGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

XP_011659382.1 GATA transcription factor 15 [Cucumis sativus]6.9e-4870.59Show/hide
Query:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV
        MLK EVIGD GLD  ++AFLMN +ADLSASTFN PSLM   SK+ LL +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+NN NGGV
Subjt:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV

Query:  ----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
            NNKMGKGKK+G   GSLKVRVV LGREI              V E+IGEEEQ AA+LLMALSSGYV
Subjt:  ----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]3.6e-3667.12Show/hide
Query:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV
        MAF +N   DLS STFNPS +   S Q LL  EPQKQR C HCRTTRTPLWRAGPAGPRSLCNACGIRYRK KNN    NGGV NK G GKKV      V
Subjt:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV

Query:  RVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV
        RVV LGREI+              E IGEEEQAAAMLLMALSSGYV
Subjt:  RVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV

XP_038899958.1 GATA transcription factor 15-like [Benincasa hispida]9.0e-4881.2Show/hide
Query:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV
        MAFL+N  AD SASTF PSLM   SKQSLLN EPQKQRACVHC TTRTPLWRAGPAGPRSLCNACGIRYRK KNNN+N+N   NNK+GKGKKVG GSLK+
Subjt:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV

Query:  RVVSLGREIVEEAIGEEEQAAAMLLMALSSGYV
        RVV L R+IV E IGEEEQAAAMLLMALSS YV
Subjt:  RVVSLGREIVEEAIGEEEQAAAMLLMALSSGYV

TrEMBL top hitse value%identityAlignment
A0A0A0K6B1 GATA-type domain-containing protein3.3e-4870.59Show/hide
Query:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV
        MLK EVIGD GLD  ++AFLMN +ADLSASTFN PSLM   SK+ LL +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+NN NGGV
Subjt:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFN-PSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV

Query:  ----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
            NNKMGKGKK+G   GSLKVRVV LGREI              V E+IGEEEQ AA+LLMALSSGYV
Subjt:  ----NNKMGKGKKVG--EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

A0A1S3BSR7 GATA transcription factor 15-like2.0e-4566.47Show/hide
Query:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------NN
        MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K         NN
Subjt:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK---------NN

Query:  NNNSNGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
        NNN+N   NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  NNNSNGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

A0A5A7TUD0 GATA transcription factor 15-like2.2e-4466.86Show/hide
Query:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNN-----NS
        MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR TRTPLWRAGPAGPRSLCNACGIRYRK K N+N     N+
Subjt:  MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNN-----NS

Query:  NGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV
        N   NNKMGKGKK+ G GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Subjt:  NGGVNNKMGKGKKV-GEGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV

A0A6J1H9M3 GATA transcription factor 15-like1.5e-3566.44Show/hide
Query:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV
        MAF +N   DLS STFNPS +   S Q LL +EPQKQR C HCRTTRTPLWRAGPAGPRSLCNACGIRYRK K    NSNGGV NK   GKKV      V
Subjt:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV

Query:  RVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV
        RVV LGREI+              E IGEEEQAAAMLLMALSSGYV
Subjt:  RVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV

A0A6J1KR45 GATA transcription factor 15-like1.7e-3667.12Show/hide
Query:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV
        MAF +N   DLS STFNPS +   S Q LL  EPQKQR C HCRTTRTPLWRAGPAGPRSLCNACGIRYRK KNN    NGGV NK G GKKV      V
Subjt:  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKV

Query:  RVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV
        RVV LGREI+              E IGEEEQAAAMLLMALSSGYV
Subjt:  RVVSLGREIV-------------EEAIGEEEQAAAMLLMALSSGYV

SwissProt top hitse value%identityAlignment
Q6QPM2 GATA transcription factor 194.3e-0850.91Show/hide
Query:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN----NNNSNGGVNNKMG
        R C +C TT TPLWR GP GP+SLCNACGIR++K +       N+++GG +   G
Subjt:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN----NNNSNGGVNNKMG

Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 11.3e-0969.44Show/hide
Query:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK
        R C  C TT+TPLWR+GP GP+SLCNACGIR RK +
Subjt:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK

Q8LG10 GATA transcription factor 151.5e-1346.23Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN--NNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM
        ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +    +N S         +  K G+ SLK R++ LGRE++             +GEEEQ AA+
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN--NNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM

Query:  LLMALS
        LLMALS
Subjt:  LLMALS

Q9FJ10 GATA transcription factor 168.9e-1449.06Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV--NNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAAAMLLMA
        K++ C  C T++TPLWR GP GP+SLCNACGIR RK +      N  +  ++  G  +K GE SLK  ++ LG   R  VE   + +GEEEQ AA+LLMA
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV--NNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAAAMLLMA

Query:  LSSGYV
        LS G V
Subjt:  LSSGYV

Q9LIB5 GATA transcription factor 171.9e-0840.45Show/hide
Query:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR-------------KTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEE
        +R CV C T RTPLWR GPAGP+SLCNACGI+ R             K KN  +N N  +N      KK      K+ +V  G+  +++
Subjt:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR-------------KTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEE

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 151.1e-1446.23Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN--NNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM
        ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +    +N S         +  K G+ SLK R++ LGRE++             +GEEEQ AA+
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN--NNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIV----------EEAIGEEEQAAAM

Query:  LLMALS
        LLMALS
Subjt:  LLMALS

AT3G16870.1 GATA transcription factor 171.4e-0940.45Show/hide
Query:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR-------------KTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEE
        +R CV C T RTPLWR GPAGP+SLCNACGI+ R             K KN  +N N  +N      KK      K+ +V  G+  +++
Subjt:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR-------------KTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEE

AT4G16141.1 GATA type zinc finger transcription factor family protein1.6e-1042.71Show/hide
Query:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR----------------KTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEEAIGE
        ++ CV C T+RTPLWR GPAGP+SLCNACGI+ R                K+K+NNN      N K GKG+ V      V++      IV+ A GE
Subjt:  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR----------------KTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEEAIGE

AT4G36620.1 GATA transcription factor 193.0e-0950.91Show/hide
Query:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN----NNNSNGGVNNKMG
        R C +C TT TPLWR GP GP+SLCNACGIR++K +       N+++GG +   G
Subjt:  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN----NNNSNGGVNNKMG

AT5G49300.1 GATA transcription factor 166.3e-1549.06Show/hide
Query:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV--NNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAAAMLLMA
        K++ C  C T++TPLWR GP GP+SLCNACGIR RK +      N  +  ++  G  +K GE SLK  ++ LG   R  VE   + +GEEEQ AA+LLMA
Subjt:  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV--NNKMGKGKKVGEGSLKVRVVSLG---REIVE---EAIGEEEQAAAMLLMA

Query:  LSSGYV
        LS G V
Subjt:  LSSGYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAAAGCTGAAGTAATTGGTGATCTTGGTTTGGATCCTTCCATCATGGCCTTCCTCATGAACTGCTCTGCCGATCTCTCTGCTTCCACCTTCAACCCATCTCTAAT
GCCCGACGCTTCGAAACAGAGTCTGCTCAATATGGAGCCGCAGAAACAGAGGGCCTGCGTCCACTGTCGCACCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCTGGGC
CAAGGTCGCTGTGCAATGCATGTGGGATTCGATACAGGAAGACGAAGAATAATAATAATAATAGTAATGGAGGAGTGAATAATAAGATGGGAAAAGGGAAGAAAGTGGGA
GAAGGATCATTGAAGGTGAGAGTGGTGAGCTTAGGAAGAGAAATAGTTGAAGAGGCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTCTATCTTCCGG
CTATGTGTGA
mRNA sequenceShow/hide mRNA sequence
TTCAAAACAGAGCTCTTAAGGACACTTTCTTCAAACACCTTCCTTTCTAGTTTGCGATGCTCAAAGCTGAAGTAATTGGTGATCTTGGTTTGGATCCTTCCATCATGGCC
TTCCTCATGAACTGCTCTGCCGATCTCTCTGCTTCCACCTTCAACCCATCTCTAATGCCCGACGCTTCGAAACAGAGTCTGCTCAATATGGAGCCGCAGAAACAGAGGGC
CTGCGTCCACTGTCGCACCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCTGGGCCAAGGTCGCTGTGCAATGCATGTGGGATTCGATACAGGAAGACGAAGAATAATA
ATAATAATAGTAATGGAGGAGTGAATAATAAGATGGGAAAAGGGAAGAAAGTGGGAGAAGGATCATTGAAGGTGAGAGTGGTGAGCTTAGGAAGAGAAATAGTTGAAGAG
GCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATGTGTGATGTCATTCATATAAACACTGGATTCTAGCTACCACTTTTGGGAA
TTTACACTTTTTGATTTGTCTCTCTTCATTTTATATGGAAAGAGAGATTTCGAGTTGGACAAATTACAAAATAAATTTTGAAAAAATATATATACAT
Protein sequenceShow/hide protein sequence
MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVG
EGSLKVRVVSLGREIVEEAIGEEEQAAAMLLMALSSGYV