; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G05710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionpre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1
Genome locationClcChr09:4512286..4515976
RNA-Seq ExpressionClc09G05710
SyntenyClc09G05710
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR002464 - DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
IPR014001 - Helicase superfamily 1/2, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5229792.1 RNA helicase family protein [Salix suchowensis]1.0e-4555.16Show/hide
Query:  SAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFKLSMI
        SA  KMNP    EAWE+HQI+KAT+++GSK KK  Q SD+YQFVFED IEFIKA++VEGD+F D    E LD+S AKSALEKL  Q +  +    K    
Subjt:  SAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFKLSMI

Query:  IKFLSLLVKLVLEKPRKYLNIEEKLDAHNRVELLLE-------YLKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKL
         +   +    +  +  + + +  KL       +  E        LK +   + +REFL EP+L  YSV+MVDEAHERTLSTD+ FGLVKDIARF PDLKL
Subjt:  IKFLSLLVKLVLEKPRKYLNIEEKLDAHNRVELLLE-------YLKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKL

Query:  LISSATLDAEKFSDYFDSAPIFK
        LISSATLDAEKFSDYFDSAPIFK
Subjt:  LISSATLDAEKFSDYFDSAPIFK

XP_008453258.1 PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis melo]5.6e-4752.31Show/hide
Query:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS
        AA KMNP    EAWEEHQI KAT+KFGSKNKK  Q+SD+YQFVFED IEFIKAS++EGDEFVD    E L+KS+A+SALEKL  +   + I  ++   L 
Subjt:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS

Query:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL
         +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L
Subjt:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL

Query:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
         SYSVIMVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

XP_011660328.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Cucumis sativus]7.3e-4751.92Show/hide
Query:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS
        AA KMNP    EAWEEHQI KAT+KFGSKNKK  Q+SD+YQFVFED IEFIKAS++EGDEFVD    E L+KS+A+SALEKL  +   + I  ++   L 
Subjt:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS

Query:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL
         +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L
Subjt:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL

Query:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
         SYSV+MVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

XP_022134864.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X1 [Momordica charantia]5.6e-4752.51Show/hide
Query:  AIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LSM
        A KMNP    EAWEEHQI KAT+KFGSKNKK  Q+SD+YQFVFED IEFIKAS++EGDEFVD    E L+KS+AKSALEKL  +   + I  ++   L  
Subjt:  AIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LSM

Query:  IIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLE
        +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L 
Subjt:  IIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLE

Query:  SYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
        SYSVIMVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  SYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

XP_038879655.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Benincasa hispida]8.6e-4853.08Show/hide
Query:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS
        AA KMNP    EAWEEHQI KAT+KFGSKNKK  QASD+YQFVFED IEFIKAS++EGDEFVD    E L+KS+AKSALEKL  +   + I  ++   L 
Subjt:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS

Query:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL
         +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L
Subjt:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL

Query:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
         SYSVIMVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

TrEMBL top hitse value%identityAlignment
A0A0A0LUM2 Uncharacterized protein3.5e-4751.92Show/hide
Query:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS
        AA KMNP    EAWEEHQI KAT+KFGSKNKK  Q+SD+YQFVFED IEFIKAS++EGDEFVD    E L+KS+A+SALEKL  +   + I  ++   L 
Subjt:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS

Query:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL
         +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L
Subjt:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL

Query:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
         SYSV+MVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

A0A1S3BVU3 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH12.7e-4752.31Show/hide
Query:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS
        AA KMNP    EAWEEHQI KAT+KFGSKNKK  Q+SD+YQFVFED IEFIKAS++EGDEFVD    E L+KS+A+SALEKL  +   + I  ++   L 
Subjt:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS

Query:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL
         +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L
Subjt:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL

Query:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
         SYSVIMVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

A0A6J1BZI7 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X12.7e-4752.51Show/hide
Query:  AIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LSM
        A KMNP    EAWEEHQI KAT+KFGSKNKK  Q+SD+YQFVFED IEFIKAS++EGDEFVD    E L+KS+AKSALEKL  +   + I  ++   L  
Subjt:  AIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LSM

Query:  IIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLE
        +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L 
Subjt:  IIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLE

Query:  SYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
        SYSVIMVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  SYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

A0A6J1F0A9 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 isoform X11.1e-4551.15Show/hide
Query:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS
        AA KMNP    EAWE+HQI KA++KFGSKNKK    +D+YQFVFED IEFIKAS++EGDEFVD    E L+KS+AKSALEKL  +   + I  ++   L 
Subjt:  AAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKLFFQSIHIVISYFK---LS

Query:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL
         +  +  L++                         K+   +PR+   ++I  ++     V+L  E                LK +   + +REFL EP+L
Subjt:  MIIKFLSLLV-------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNL

Query:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
         SYSVIMVDEAHERTLSTDV FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  ESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

A0A6N2LPM7 Uncharacterized protein3.3e-4550.96Show/hide
Query:  SAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKL---------------FF
        SA  KMNP    EAWE+HQI+KAT+K+GSKNKK  Q+SD+YQFVFED IEFIKA++VEGD+F D    E LD+S AKSALEKL                 
Subjt:  SAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD----EPLDKSQAKSALEKL---------------FF

Query:  QSI--HIVISYF------KLSMIIKFL-----SLLVKLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPN
        ++I  H VI         K + I ++L     +   K+   +PR+   +++  ++     V+L  E                LK +   + +REFL EP+
Subjt:  QSI--HIVISYF------KLSMIIKFL-----SLLVKLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPN

Query:  LESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
        L  YSV+MVDEAHERTLSTD+ FGLVKDIARF PDLKLLISSATLDAEKFSDYFDSAPIFK
Subjt:  LESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

SwissProt top hitse value%identityAlignment
F4IJV4 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH61.2e-3642.38Show/hide
Query:  SVHHSPSVSAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDE----PLDKSQAKSALEKLFFQSIHIVI
        SV     + +A KMNP    EAWE+HQIE A +KFG+KNK   + SD Y+FVFED I+FIKAS++ GD + DE    P   S  KSA   L      + I
Subjt:  SVHHSPSVSAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDE----PLDKSQAKSALEKLFFQSIHIVI

Query:  SYF-----------------------KLSMIIKFL-----SLLVKLVLEKPRKYL----------NIEEKLDAHNRVELLLE-------YLKNLVSSLGM
          +                       K + I ++L     + L K+   +PR+             +  KL       +  E        LK +   + +
Subjt:  SYF-----------------------KLSMIIKFL-----SLLVKLVLEKPRKYL----------NIEEKLDAHNRVELLLE-------YLKNLVSSLGM

Query:  REFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
        RE L EP+L SYSVI+VDEAHERTL TD+ FGLVKDIAR  PDLKLLISSAT+DAEKFSD+FD APIF+
Subjt:  REFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

F4JMJ3 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH84.8e-2537.08Show/hide
Query:  EAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDEPLDKSQAKSALEKLFFQSIH---------------IVI----SYFKL
        EAWE+HQ +KA ++FG+K+KK  Q  D Y+FVF+D   F++ S             K+ A+ A E   F  IH               +VI       K 
Subjt:  EAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDEPLDKSQAKSALEKLFFQSIH---------------IVI----SYFKL

Query:  SMIIKFL-----SLLVKLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTD
        + I ++L     +   K+   +PR+   +++  ++     V+L  E                +K +   + +RE L EP L+SYSVI++DEAHERTLSTD
Subjt:  SMIIKFL-----SLLVKLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTD

Query:  VQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF
        + F LVKD+A+  PDL+L+ISSATL+A+KFS+YFDSA I+
Subjt:  VQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF

O45244 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-48.1e-2572.15Show/hide
Query:  LKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
        LK +   + +REFL+EP+L SYSV+M+DEAHERTL TD+ FGLVKDIARF  DLKLLISSATLDAEKFS +FD APIF+
Subjt:  LKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

Q10752 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc286.2e-2571.79Show/hide
Query:  LKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF
        +K L   + +REFL+EP+L SYSVI++DEAHERTL TD+ FGLVKDIARF PDLK+LISSAT+DAEKFS YFD AP+F
Subjt:  LKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF

Q8VY00 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH11.3e-3845.14Show/hide
Query:  KMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD--EPLDKSQ---AKSALEKL--FFQSIHIVISYFKLSMII
        KMNP    EAWE+HQI KAT+KFG+KNK   QASD+YQFVFED I FIK S++ G+ + D  +   KSQ    K+ALE+L    +S+ I     +L   +
Subjt:  KMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD--EPLDKSQ---AKSALEKL--FFQSIHIVISYFKLSMII

Query:  KFLSLLV--------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLES
        +   +LV                          K+   +PR+   +++  ++     V+L  E                LK +   + +RE L EP+L S
Subjt:  KFLSLLV--------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLES

Query:  YSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF
        YSV++VDEAHERTLSTD+ FGLVKDIARF PDLKLLISSAT+DAEKFSDYFD+APIF
Subjt:  YSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF

Arabidopsis top hitse value%identityAlignment
AT1G32490.1 RNA helicase family protein9.2e-4045.14Show/hide
Query:  KMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD--EPLDKSQ---AKSALEKL--FFQSIHIVISYFKLSMII
        KMNP    EAWE+HQI KAT+KFG+KNK   QASD+YQFVFED I FIK S++ G+ + D  +   KSQ    K+ALE+L    +S+ I     +L   +
Subjt:  KMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD--EPLDKSQ---AKSALEKL--FFQSIHIVISYFKLSMII

Query:  KFLSLLV--------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLES
        +   +LV                          K+   +PR+   +++  ++     V+L  E                LK +   + +RE L EP+L S
Subjt:  KFLSLLV--------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLES

Query:  YSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF
        YSV++VDEAHERTLSTD+ FGLVKDIARF PDLKLLISSAT+DAEKFSDYFD+APIF
Subjt:  YSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF

AT1G32490.2 RNA helicase family protein9.2e-4045.14Show/hide
Query:  KMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD--EPLDKSQ---AKSALEKL--FFQSIHIVISYFKLSMII
        KMNP    EAWE+HQI KAT+KFG+KNK   QASD+YQFVFED I FIK S++ G+ + D  +   KSQ    K+ALE+L    +S+ I     +L   +
Subjt:  KMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVD--EPLDKSQ---AKSALEKL--FFQSIHIVISYFKLSMII

Query:  KFLSLLV--------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLES
        +   +LV                          K+   +PR+   +++  ++     V+L  E                LK +   + +RE L EP+L S
Subjt:  KFLSLLV--------------------------KLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLES

Query:  YSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF
        YSV++VDEAHERTLSTD+ FGLVKDIARF PDLKLLISSAT+DAEKFSDYFD+APIF
Subjt:  YSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF

AT2G35340.1 helicase domain-containing protein8.6e-3842.38Show/hide
Query:  SVHHSPSVSAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDE----PLDKSQAKSALEKLFFQSIHIVI
        SV     + +A KMNP    EAWE+HQIE A +KFG+KNK   + SD Y+FVFED I+FIKAS++ GD + DE    P   S  KSA   L      + I
Subjt:  SVHHSPSVSAAIKMNP---SEAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDE----PLDKSQAKSALEKLFFQSIHIVI

Query:  SYF-----------------------KLSMIIKFL-----SLLVKLVLEKPRKYL----------NIEEKLDAHNRVELLLE-------YLKNLVSSLGM
          +                       K + I ++L     + L K+   +PR+             +  KL       +  E        LK +   + +
Subjt:  SYF-----------------------KLSMIIKFL-----SLLVKLVLEKPRKYL----------NIEEKLDAHNRVELLLE-------YLKNLVSSLGM

Query:  REFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
        RE L EP+L SYSVI+VDEAHERTL TD+ FGLVKDIAR  PDLKLLISSAT+DAEKFSD+FD APIF+
Subjt:  REFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

AT3G62310.1 RNA helicase family protein8.1e-2056.96Show/hide
Query:  LKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK
        LK L   + +RE +++P LE Y VI++DEAHERTL+TDV FGL+K++ +  PDLKL++ SATL+AEKF DYF  AP+ K
Subjt:  LKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFK

AT4G16680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein3.4e-2637.08Show/hide
Query:  EAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDEPLDKSQAKSALEKLFFQSIH---------------IVI----SYFKL
        EAWE+HQ +KA ++FG+K+KK  Q  D Y+FVF+D   F++ S             K+ A+ A E   F  IH               +VI       K 
Subjt:  EAWEEHQIEKATIKFGSKNKKLQQASDEYQFVFEDPIEFIKASIVEGDEFVDEPLDKSQAKSALEKLFFQSIH---------------IVI----SYFKL

Query:  SMIIKFL-----SLLVKLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTD
        + I ++L     +   K+   +PR+   +++  ++     V+L  E                +K +   + +RE L EP L+SYSVI++DEAHERTLSTD
Subjt:  SMIIKFL-----SLLVKLVLEKPRKY--LNIEEKLDAHNRVELLLE---------------YLKNLVSSLGMREFLSEPNLESYSVIMVDEAHERTLSTD

Query:  VQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF
        + F LVKD+A+  PDL+L+ISSATL+A+KFS+YFDSA I+
Subjt:  VQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGATATGATAAGCTAGTTCAGTCCCTTCTCCTCGATCCTGTATTGATCCACGACCATTCTTGGTATCCTTTGGTGGATATCCCACATGAAATTCGCGATGAGGG
TTCCAAACCTCCTCGAGACCACGTTGATATTTTAGAAAAAGGTGATTGCCGAAGTCGACCTCAGGTGATCGCCGTTGCCCAACTCTGGCTGCCACCTACAGCGACAGCCA
TCGGCCAACTACAAAAATTGCCGCCGACCAACCTCATGCAGTCACCACTGATGGTTGTCGTCGTCCAACTCCTACGGTCACGTTCAATGATTTGTCGTCGGCCAACCTCC
CGCGACTCCTTTTGGCGAATTTCCAGCCACCAACTCTGCCAACCAACCTTCGACTGCCACCTTAGTGACCCCAATCGGCCAACTTTGAAAAACATTAATAAAAAGAAACC
CACGACTCCCACACTCGTCCGCACGTCAGCCGCGCCTGCCACCGTCGTATCTCCGGCCAGATATTGCTGCCACTCCAGTCCGCCGTCTAGCGTCCACCACTCGCCGTCGG
TAAGTGCTGCCATTAAAATGAACCCATCAGAGGCATGGGAGGAACACCAAATAGAGAAAGCAACAATAAAATTCGGTTCCAAAAACAAAAAGCTGCAGCAAGCATCAGAT
GAGTATCAGTTTGTATTTGAGGATCCGATTGAGTTTATTAAGGCATCCATTGTGGAAGGTGATGAGTTTGTTGATGAACCACTTGACAAGTCCCAGGCCAAGTCAGCTCT
GGAGAAACTGTTTTTCCAATCTATCCATATCGTGATCAGTTACTTCAAGCTATCAATGATTATCAAGTTCTTGTCATTGTTGGTGAAACTGGTTCTGGAAAAACCACGCA
AATACCTCAATATCGAGGAAAAGTTGGATGCACACAACCGCGTCGAGTTGCTGCTCGAGTATCTCAAGAACTTGGTGTCAAGCTTGGGCATGAGGGAATTCCTTAGTGAA
CCTAACCTTGAAAGCTATAGTGTTATAATGGTGGATGAAGCTCATGAAAGAACATTATCAACTGATGTTCAGTTTGGTTTAGTGAAGGATATTGCTAGGTTTGGGCCTGA
TTTGAAGTTGCTAATTTCAAGTGCAACACTTGATGCTGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAAACCCACAACCATAGGAGCAAGGAAAGTTGTCT
TAGCAACTAATATAGCAGAGACATCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAGATATGATAAGCTAGTTCAGTCCCTTCTCCTCGATCCTGTATTGATCCACGACCATTCTTGGTATCCTTTGGTGGATATCCCACATGAAATTCGCGATGAGGG
TTCCAAACCTCCTCGAGACCACGTTGATATTTTAGAAAAAGGTGATTGCCGAAGTCGACCTCAGGTGATCGCCGTTGCCCAACTCTGGCTGCCACCTACAGCGACAGCCA
TCGGCCAACTACAAAAATTGCCGCCGACCAACCTCATGCAGTCACCACTGATGGTTGTCGTCGTCCAACTCCTACGGTCACGTTCAATGATTTGTCGTCGGCCAACCTCC
CGCGACTCCTTTTGGCGAATTTCCAGCCACCAACTCTGCCAACCAACCTTCGACTGCCACCTTAGTGACCCCAATCGGCCAACTTTGAAAAACATTAATAAAAAGAAACC
CACGACTCCCACACTCGTCCGCACGTCAGCCGCGCCTGCCACCGTCGTATCTCCGGCCAGATATTGCTGCCACTCCAGTCCGCCGTCTAGCGTCCACCACTCGCCGTCGG
TAAGTGCTGCCATTAAAATGAACCCATCAGAGGCATGGGAGGAACACCAAATAGAGAAAGCAACAATAAAATTCGGTTCCAAAAACAAAAAGCTGCAGCAAGCATCAGAT
GAGTATCAGTTTGTATTTGAGGATCCGATTGAGTTTATTAAGGCATCCATTGTGGAAGGTGATGAGTTTGTTGATGAACCACTTGACAAGTCCCAGGCCAAGTCAGCTCT
GGAGAAACTGTTTTTCCAATCTATCCATATCGTGATCAGTTACTTCAAGCTATCAATGATTATCAAGTTCTTGTCATTGTTGGTGAAACTGGTTCTGGAAAAACCACGCA
AATACCTCAATATCGAGGAAAAGTTGGATGCACACAACCGCGTCGAGTTGCTGCTCGAGTATCTCAAGAACTTGGTGTCAAGCTTGGGCATGAGGGAATTCCTTAGTGAA
CCTAACCTTGAAAGCTATAGTGTTATAATGGTGGATGAAGCTCATGAAAGAACATTATCAACTGATGTTCAGTTTGGTTTAGTGAAGGATATTGCTAGGTTTGGGCCTGA
TTTGAAGTTGCTAATTTCAAGTGCAACACTTGATGCTGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAAACCCACAACCATAGGAGCAAGGAAAGTTGTCT
TAGCAACTAATATAGCAGAGACATCGTAG
Protein sequenceShow/hide protein sequence
MIRYDKLVQSLLLDPVLIHDHSWYPLVDIPHEIRDEGSKPPRDHVDILEKGDCRSRPQVIAVAQLWLPPTATAIGQLQKLPPTNLMQSPLMVVVVQLLRSRSMICRRPTS
RDSFWRISSHQLCQPTFDCHLSDPNRPTLKNINKKKPTTPTLVRTSAAPATVVSPARYCCHSSPPSSVHHSPSVSAAIKMNPSEAWEEHQIEKATIKFGSKNKKLQQASD
EYQFVFEDPIEFIKASIVEGDEFVDEPLDKSQAKSALEKLFFQSIHIVISYFKLSMIIKFLSLLVKLVLEKPRKYLNIEEKLDAHNRVELLLEYLKNLVSSLGMREFLSE
PNLESYSVIMVDEAHERTLSTDVQFGLVKDIARFGPDLKLLISSATLDAEKFSDYFDSAPIFKPTTIGARKVVLATNIAETS