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Clc09G05860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:4641592..4642180
RNA-Seq ExpressionClc09G05860
SyntenyClc09G05860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593213.1 hypothetical protein SDJN03_12689, partial [Cucurbita argyrosperma subsp. sororia]4.9e-0550.6Show/hide
Query:  MAAFWQLEE-YHYFVERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQSSVNSAAA---TTIDSKEAAERYG
        MAAF + EE Y+YFVE+ RTK  RP Q       K+  DGE+HHL R  N  DH LFF     S      +TIDSKEAAE  G
Subjt:  MAAFWQLEE-YHYFVERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQSSVNSAAA---TTIDSKEAAERYG
TrEMBL top hitse value%identityAlignment
A0A0A0K673 Uncharacterized protein1.6e-2561.68Show/hide
Query:  MAAFWQLEEYHYF-VERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQSSVNSAAA-------TTIDSKEAAERYGGISIIDYRTKKPA
        MAAF++ EEYHYF  ERTR    R PQPP PL+KK PY+GEI HL R KN CDHTL F+ SVNSAAA       TTI+SK+AA+ YGGI+I+D+ TKKPA
Subjt:  MAAFWQLEEYHYF-VERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQSSVNSAAA-------TTIDSKEAAERYGGISIIDYRTKKPA

Query:  AADFRFR
             FR
Subjt:  AADFRFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATACCGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTA
CGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTCCTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGG
CCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATTTTCGATTTCGCATTTAA
mRNA sequenceShow/hide mRNA sequence
AAGATAAATTAAGATTCACACTATTCCTTAGAAAATTAAAACAAACATTCCTTCGCCCTATAAATGGAACCCCAAAATCCTTTACCCTCCTCACAAAACAAACACACAAC
TTCAATTACTACGTTTCCCACTCTCTGCATCTTCGCCGGAATCCATGGCAGCTTTCTGGCAGCTGGAGGAATACCATTACTTCGTCGAGCGAACAAGAACAAAAGCATAC
CGACCACCGCAACCACCACTTCCCCTTAACAAAAAGCTCCCCTACGACGGCGAGATTCATCACCTCCACCGGTATAAAAACACCTGTGATCATACTCTGTTCTTCCAGTC
CTCTGTCAATTCCGCGGCGGCCACGACCATTGATAGCAAAGAGGCCGCCGAGAGGTACGGCGGAATTTCCATCATCGATTACCGGACCAAGAAACCTGCGGCGGCGGATT
TTCGATTTCGCATTTAAAGGTGTGGAATTCCGTGGGAATTAGAGTGGCTTTTGTTTTTTTGTTTATGGTGGTCACTCATCAACTGTAATTATCTTAAACAAAAGTTATAT
CTAATCACTACAATATATGAATAATTGCTTAAGAAATTT
Protein sequenceShow/hide protein sequence
MAAFWQLEEYHYFVERTRTKAYRPPQPPLPLNKKLPYDGEIHHLHRYKNTCDHTLFFQSSVNSAAATTIDSKEAAERYGGISIIDYRTKKPAAADFRFRI