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Clc09G05910 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05910
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAnkyrin repeat protein
Genome locationClcChr09:4656384..4657040
RNA-Seq ExpressionClc09G05910
SyntenyClc09G05910
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]3.7e-5862.87Show/hide
Query:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI
        M   FKLFQTL LVFAW  CC++V ATF+DTTGVV+ GLNH FSFRAFGWP IGT NV G+I STV  QI AEAP GIAPVGL+T INKE    S+  +I
Subjt:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI

Query:  IRKIEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGKF-GLISN-NNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGS
        I++I+ GG +SND + NL +G NIAFSHGGK+S+KSK       GGK  G +SN NNK L FG+  K   VASLGLK H+ KV+VGVS GGNIS+ KRGS
Subjt:  IRKIEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGKF-GLISN-NNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGS

Query:  II
        ++
Subjt:  II

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.9e-5559.91Show/hide
Query:  NFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRK
        +FKLFQTL LVFAW  CC++V ATFSDTTGVV+ GLNH FSFRAFGWP IGT NV GSI STV  QI AEAP GIAPVGLETPINK+D V S   +II++
Subjt:  NFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRK

Query:  IEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGK----FGLISNNNKALPFGLDTKMQIVASL-----------GLKAHKRKVDVGVSDG
        I+ GG VSND +  L SG NIAFS+ GK+S+KSK       GGK       I+N   +L FG++ K   VASL           G+KAHK KV+VGVS G
Subjt:  IEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGK----FGLISNNNKALPFGLDTKMQIVASL-----------GLKAHKRKVDVGVSDG

Query:  GNISLKKRGSII
        GNIS+ KRGS++
Subjt:  GNISLKKRGSII

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]3.7e-4250.84Show/hide
Query:  MAT--NFKLFQTLFLVFAWLCCSKVSATFSDTTGVVDLGLNHHFSFR-AFGWPRIGT-SNVGGS-IASTVNNQIHAEAPT-GIAPVGLET-PINKEDIVS
        MAT   FKLF  LFLV A LCC KV ATF D TG++ LG++H +SFR   G   +G  SN GGS  +S V+ +   +APT  IAP GLET P  K     
Subjt:  MAT--NFKLFQTLFLVFAWLCCSKVSATFSDTTGVVDLGLNHHFSFR-AFGWPRIGT-SNVGGS-IASTVNNQIHAEAPT-GIAPVGLET-PINKEDIVS

Query:  SFGHEIIRKIEDGGVVSNDDKINLKSGRNIAFS------HGGKISLKSKGGKFGL-------ISNNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDG
           H+ +        VS D  I+ KSGRNIA S      +GGKI +KS    F +       +S NNKAL FG++ +   VASLGLKAH RKV VGVS G
Subjt:  SFGHEIIRKIEDGGVVSNDDKINLKSGRNIAFS------HGGKISLKSKGGKFGL-------ISNNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDG

Query:  GNISLKKRGSIISHGGLMGFKSNANVFVSHGLGVHGTM
        GNIS+KKRGSI+S+G   GFKS  NV  SHGLG+ GTM
Subjt:  GNISLKKRGSIISHGGLMGFKSNANVFVSHGLGVHGTM

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]4.1e-6565.44Show/hide
Query:  ATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRKIEDGGVVSNDDKINLKSGRNIA
        ATF+D TGVV+L LNHHFSFR FGWPRIGT N  GS+ASTVNN  HAEAPTGIAPVGL+TPINK D VS+FG EII++IE G VVS D +INLKSG NIA
Subjt:  ATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRKIEDGGVVSNDDKINLKSGRNIA

Query:  FSHGGKISLKSK--------GGKFGL---------------ISNNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGSIISHGGLMGFK
         SHGGKISLK K        GGKFGL               +S NNK L FG++ K   VASLGLKA K K++ GVS GGNIS+KKRGSI+S GG +G K
Subjt:  FSHGGKISLKSK--------GGKFGL---------------ISNNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGSIISHGGLMGFK

Query:  SNANVFVSHGLGVHGTM
        S+A VFVSHGLG+HG M
Subjt:  SNANVFVSHGLGVHGTM

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]7.0e-4961.96Show/hide
Query:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI
        MA  F LFQTL LVFAW  CC++V ATFSD TGVV+ GLNH FSFRAFGWP IGT NV GSI STV  QI AEAP GIAPVGLET INKED V S+  +I
Subjt:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI

Query:  IRKIEDGG-VVSNDDKINLKSGRNIAFSHGGKISLKSKGGKFGLIS----------NNNKALPFGLDTKMQIVASLGLKAHKRK
        I++I+ GG VVS+D + NL SG NIAFSHGGK+S+KSKG   G             +N K L FG++ K    A+LGLKAHK K
Subjt:  IRKIEDGG-VVSNDDKINLKSGRNIAFSHGGKISLKSKGGKFGLIS----------NNNKALPFGLDTKMQIVASLGLKAHKRK

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein3.6e-7566.39Show/hide
Query:  MATNFKLFQTLFLVFAWLCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEII
        MA  FKLFQTLFLVFAW  C KV ATF+D TGVV+L LNHHFSFR FGWPRIGT N  GS+ASTVNN  HAEAPTGIAPVGL+TPINK D VS+FG EII
Subjt:  MATNFKLFQTLFLVFAWLCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEII

Query:  RKIEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK--------GGKFGL---------------ISNNNKALPFGLDTKMQIVASLGLKAHKRKVDVGV
        ++IE G VVS D +INLKSG NIA SHGGKISLK K        GGKFGL               +S NNK L FG++ K   VASLGLKA K K++ GV
Subjt:  RKIEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK--------GGKFGL---------------ISNNNKALPFGLDTKMQIVASLGLKAHKRKVDVGV

Query:  SDGGNISLKKRGSIISHGGLMGFKSNANVFVSHGLGVHGTM
        S GGNIS+KKRGSI+S GG +G KS+A VFVSHGLG+HG M
Subjt:  SDGGNISLKKRGSIISHGGLMGFKSNANVFVSHGLGVHGTM

A0A0A0K7W7 Uncharacterized protein6.2e-5963.73Show/hide
Query:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI
        MA  FKLFQTL LVFAW  CC++V ATFSD TGVV+ GLNH FSFRAFGWP IGT +V GSI STV  QIHAEAP GIAPVGLET INKED V S+  +I
Subjt:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI

Query:  IRKIEDGG-VVSNDDKINLKSGRNIAFSHGGKISLKSKGGKFGLIS----------NNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKR
        I++I+ GG VVS+D + NL SG NIAFSHGGK+S+KSKG   G             +N K L FG++ K    A+LGLKAHK KV+VGVS GGNIS+ KR
Subjt:  IRKIEDGG-VVSNDDKINLKSGRNIAFSHGGKISLKSKGGKFGLIS----------NNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKR

Query:  GSII
        GSI+
Subjt:  GSII

A0A0A0KAZ8 Uncharacterized protein6.8e-5063.69Show/hide
Query:  SATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRKIEDGG-VVSNDDKINLKSGRN
        SATFSD TGVV+ GLNH FSFRAFGWP IGT NV GSI STV  QI AEAP GIAPVGLET INKED V S+  +II++I+ GG VVS+D + NL SG N
Subjt:  SATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRKIEDGG-VVSNDDKINLKSGRN

Query:  IAFSHGGKISLKSKGGKFGLIS----------NNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGSI
        IAFSHGGK+S+KSKG   G             +N K L FG++ K    A+LGLKAHK KV+VGVS GGNIS+ KRGSI
Subjt:  IAFSHGGKISLKSKGGKFGLIS----------NNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGSI

A0A5A7U057 Ankyrin repeat protein1.8e-5862.87Show/hide
Query:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI
        M   FKLFQTL LVFAW  CC++V ATF+DTTGVV+ GLNH FSFRAFGWP IGT NV G+I STV  QI AEAP GIAPVGL+T INKE    S+  +I
Subjt:  MATNFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEI

Query:  IRKIEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGKF-GLISN-NNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGS
        I++I+ GG +SND + NL +G NIAFSHGGK+S+KSK       GGK  G +SN NNK L FG+  K   VASLGLK H+ KV+VGVS GGNIS+ KRGS
Subjt:  IRKIEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGKF-GLISN-NNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGS

Query:  II
        ++
Subjt:  II

A0A5A7U318 Ankyrin repeat protein1.4e-5559.91Show/hide
Query:  NFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRK
        +FKLFQTL LVFAW  CC++V ATFSDTTGVV+ GLNH FSFRAFGWP IGT NV GSI STV  QI AEAP GIAPVGLETPINK+D V S   +II++
Subjt:  NFKLFQTLFLVFAW-LCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRK

Query:  IEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGK----FGLISNNNKALPFGLDTKMQIVASL-----------GLKAHKRKVDVGVSDG
        I+ GG VSND +  L SG NIAFS+ GK+S+KSK       GGK       I+N   +L FG++ K   VASL           G+KAHK KV+VGVS G
Subjt:  IEDGGVVSNDDKINLKSGRNIAFSHGGKISLKSK-------GGK----FGLISNNNKALPFGLDTKMQIVASL-----------GLKAHKRKVDVGVSDG

Query:  GNISLKKRGSII
        GNIS+ KRGS++
Subjt:  GNISLKKRGSII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACAAATTTTAAGCTCTTTCAAACCCTTTTCCTAGTGTTTGCTTGGCTGTGTTGTTCAAAGGTGAGTGCCACTTTCAGTGATACCACCGGTGTCGTAGATCTCGG
TCTCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATTGGAACCTCGAATGTTGGTGGTAGCATTGCATCAACCGTAAACAATCAAATACATGCAGAAGCAC
CAACAGGGATTGCTCCTGTTGGGCTTGAAACTCCAATCAACAAAGAGGACATAGTTTCGTCTTTTGGTCACGAAATTATTAGGAAGATCGAAGATGGTGGTGTTGTTTCA
AATGATGATAAAATTAATTTGAAGAGTGGTCGTAACATTGCTTTTTCTCATGGTGGCAAAATTAGTCTAAAGAGTAAAGGTGGCAAATTTGGTCTAATAAGCAACAATAA
CAAAGCTTTGCCTTTTGGTCTTGACACTAAAATGCAAATTGTTGCATCTCTTGGTCTCAAAGCTCACAAGAGAAAGGTTGATGTTGGAGTTTCTGATGGTGGTAATATTA
GTCTAAAGAAGAGAGGTAGTATTATTTCACATGGTGGCCTAATGGGTTTTAAGAGCAATGCCAATGTTTTTGTTTCTCATGGTCTCGGAGTTCACGGTACAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACAAATTTTAAGCTCTTTCAAACCCTTTTCCTAGTGTTTGCTTGGCTGTGTTGTTCAAAGGTGAGTGCCACTTTCAGTGATACCACCGGTGTCGTAGATCTCGG
TCTCAACCATCATTTTTCTTTTCGTGCGTTCGGATGGCCTCGAATTGGAACCTCGAATGTTGGTGGTAGCATTGCATCAACCGTAAACAATCAAATACATGCAGAAGCAC
CAACAGGGATTGCTCCTGTTGGGCTTGAAACTCCAATCAACAAAGAGGACATAGTTTCGTCTTTTGGTCACGAAATTATTAGGAAGATCGAAGATGGTGGTGTTGTTTCA
AATGATGATAAAATTAATTTGAAGAGTGGTCGTAACATTGCTTTTTCTCATGGTGGCAAAATTAGTCTAAAGAGTAAAGGTGGCAAATTTGGTCTAATAAGCAACAATAA
CAAAGCTTTGCCTTTTGGTCTTGACACTAAAATGCAAATTGTTGCATCTCTTGGTCTCAAAGCTCACAAGAGAAAGGTTGATGTTGGAGTTTCTGATGGTGGTAATATTA
GTCTAAAGAAGAGAGGTAGTATTATTTCACATGGTGGCCTAATGGGTTTTAAGAGCAATGCCAATGTTTTTGTTTCTCATGGTCTCGGAGTTCACGGTACAATGTAA
Protein sequenceShow/hide protein sequence
MATNFKLFQTLFLVFAWLCCSKVSATFSDTTGVVDLGLNHHFSFRAFGWPRIGTSNVGGSIASTVNNQIHAEAPTGIAPVGLETPINKEDIVSSFGHEIIRKIEDGGVVS
NDDKINLKSGRNIAFSHGGKISLKSKGGKFGLISNNNKALPFGLDTKMQIVASLGLKAHKRKVDVGVSDGGNISLKKRGSIISHGGLMGFKSNANVFVSHGLGVHGTM