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Clc09G05930 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05930
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionindole-3-acetic acid-induced protein ARG2-like
Genome locationClcChr09:4693033..4693449
RNA-Seq ExpressionClc09G05930
SyntenyClc09G05930
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575820.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. sororia]3.7e-4090.48Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK++SALV+DGFSSALSRRGYAAA ASQGVASSAVKGGSVAAA NSNLLKKSGEEKV GSSEKVSWVPDPVTGYYRPENR+DEIDVAELRS L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

WP_156424221.1 hypothetical protein, partial [Myroides odoratus]3.1e-42100Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  L
        L
Subjt:  L

XP_022953730.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial [Cucurbita moschata]2.2e-4091.43Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK+ISALV+DGFSSALSRRGYAAA ASQGVASSAVKGGSVAAA NSNLLKKSGEEKV GSSEKVSWVPDPVTGYYRPENR+DEIDVAELRS L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

XP_022991270.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima]5.8e-4190.48Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK++SA+V+DGFSSALSRRGYAAA ASQGVASSAVKGGSVAAARNSNLLKKSGEEKV GSSEKVSWVPDPVTGYYRPENR+DEIDVAELRS+L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

XP_023548996.1 indole-3-acetic acid-induced protein ARG2 [Cucurbita pepo subsp. pepo]2.6e-4191.43Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK++SALV+DGFSSALSRRGYAAA ASQGVASSAVKGGSVAAARNSNLLKKSGEEKV GSSEKVSWVPDPVTGYYRPENR+DEIDVAELRS+L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

TrEMBL top hitse value%identityAlignment
A0A1S3BRT2 indole-3-acetic acid-induced protein ARG2-like7.6e-3987.62Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK++SA+VSDGFSS L+ RGYAAAA SQGVASSAVKG  VAAAR+SNLLKKSGEEKV GS+EKVSWVPDPVTGYYRPENR DEIDVAELRSIL
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        LKNKN
Subjt:  LKNKN

A0A5D3D3A4 Indole-3-acetic acid-induced protein ARG2-like7.6e-3987.62Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK++SA+VSDGFSS L+ RGYAAAA SQGVASSAVKG  VAAAR+SNLLKKSGEEKV GS+EKVSWVPDPVTGYYRPENR DEIDVAELRSIL
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        LKNKN
Subjt:  LKNKN

A0A6J1GQH1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial1.1e-4091.43Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK+ISALV+DGFSSALSRRGYAAA ASQGVASSAVKGGSVAAA NSNLLKKSGEEKV GSSEKVSWVPDPVTGYYRPENR+DEIDVAELRS L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

A0A6J1JSE9 indole-3-acetic acid-induced protein ARG2-like2.8e-4190.48Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK++SA+V+DGFSSALSRRGYAAA ASQGVASSAVKGGSVAAARNSNLLKKSGEEKV GSSEKVSWVPDPVTGYYRPENR+DEIDVAELRS+L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        L N+N
Subjt:  LKNKN

A0A6J1KR71 indole-3-acetic acid-induced protein ARG2-like9.9e-3988.57Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSFSNVK++SALVSDGFSSALSRRGY  AAASQGVASSAVKGGSVA AR+ N+LKKSGEEKV GSSEKV+WVPDP TGYYRPENR DEIDVAELRSIL
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNKN
        LKNKN
Subjt:  LKNKN

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG21.1e-2160.58Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARSF+NVK++SALV+DGFS+  +R G+AAAAA+     SA +GG   A+   N++ KSGEEKV G  EKVSWVPDPVTGYYRPEN ++EIDVA++R+ +
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNK
        L  K
Subjt:  LKNK

P46522 Late embryogenesis abundant protein Lea5-D4.5e-1245.19Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARS S+ KL+ A + DG   ++SRRGY+ A  +   AS    G      R   + + S  E  A SS   +W PDPVTGYYRPEN   EID AELR +L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNK
        L ++
Subjt:  LKNK

Q39644 Late embryogenesis abundant protein Lea55.3e-1346.15Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARS    KL+ A V+DG S ++SRRGYAAAA    ++ + +           N L+ +  E    SS   +W PDP+TGYYRPENR+ EID AELR +L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNK
        L +K
Subjt:  LKNK

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial5.8e-2058.65Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARS SNVK++SA VS   S+A+ RRGYAA AA QG  SS  + G+VA+A    ++KK G E+   S++K+SWVPDP TGYYRPE  S+EID AELR+ L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNK
        L NK
Subjt:  LKNK

Q9SRX6 Late embryogenis abundant protein 23.7e-1450.96Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARS +N K+ S   S+  S+A+ RRG+AAAA            GSV+ A    + K++GE     SSEK  WVPDP TGYYRPE  S+EID AELR+IL
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNK
        L NK
Subjt:  LKNK

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein2.6e-1550.96Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARS +N K+ S   S+  S+A+ RRG+AAAA            GSV+ A    + K++GE     SSEK  WVPDP TGYYRPE  S+EID AELR+IL
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNK
        L NK
Subjt:  LKNK

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein1.1e-0556.76Show/hide
Query:  EKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN
        E++ W+PDP TGYYRP+N + E+D  ELRS+   NKN
Subjt:  EKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN

AT4G02380.1 senescence-associated gene 214.1e-2158.65Show/hide
Query:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL
        MARS SNVK++SA VS   S+A+ RRGYAA AA QG  SS  + G+VA+A    ++KK G E+   S++K+SWVPDP TGYYRPE  S+EID AELR+ L
Subjt:  MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSIL

Query:  LKNK
        L NK
Subjt:  LKNK

AT4G02380.2 senescence-associated gene 212.9e-1457.5Show/hide
Query:  RRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNK
        +RGYAA AA QG  SS  + G+VA+A    ++KK G E+   S++K+SWVPDP TGYYRPE  S+EID AELR+ LL NK
Subjt:  RRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNK

AT4G15910.1 drought-induced 213.6e-0943.4Show/hide
Query:  ARSFSN-VKLISALVSDGFS-SALSRRGYAAAAASQGVASSAV-KGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRS
        ARS S  VK + +  S   S S + RR Y   A SQ V ++ + KGGS      + ++    E++      + +W PDPVTGYYRP NR+ EID AELR 
Subjt:  ARSFSN-VKLISALVSDGFS-SALSRRGYAAAAASQGVASSAV-KGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRS

Query:  ILLKNK
        +LLKNK
Subjt:  ILLKNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGCTCTTTCTCCAACGTTAAGCTCATCTCCGCTCTCGTTTCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGTTACGCTGCGGCTGCGGCTTCTCAAGGAGT
TGCGTCGAGTGCGGTTAAAGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGAGAGGAGAAGGTTGCTGGATCATCTGAGAAGGTTTCTTGGG
TGCCGGATCCTGTTACTGGATATTACCGACCGGAGAATCGCTCTGATGAGATCGATGTTGCCGAACTTCGATCGATTCTCCTTAAGAACAAGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGCTCTTTCTCCAACGTTAAGCTCATCTCCGCTCTCGTTTCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGTTACGCTGCGGCTGCGGCTTCTCAAGGAGT
TGCGTCGAGTGCGGTTAAAGGAGGAAGTGTTGCGGCGGCGAGGAACAGTAATCTGTTGAAGAAATCGGGAGAGGAGAAGGTTGCTGGATCATCTGAGAAGGTTTCTTGGG
TGCCGGATCCTGTTACTGGATATTACCGACCGGAGAATCGCTCTGATGAGATCGATGTTGCCGAACTTCGATCGATTCTCCTTAAGAACAAGAACTAA
Protein sequenceShow/hide protein sequence
MARSFSNVKLISALVSDGFSSALSRRGYAAAAASQGVASSAVKGGSVAAARNSNLLKKSGEEKVAGSSEKVSWVPDPVTGYYRPENRSDEIDVAELRSILLKNKN