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Clc09G05960 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G05960
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAnkyrin repeat protein
Genome locationClcChr09:4704923..4705754
RNA-Seq ExpressionClc09G05960
SyntenyClc09G05960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.7e-1745.45Show/hide
Query:  MAIARGFKLFPTLFLVLSWQY-CAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQ
        MA+ RGFKLF TL LV +W+Y CA+V ATF+D TG         F    FG   +G   N+ G +   +K    K   + AP G         I PV LQ
Subjt:  MAIARGFKLFPTLFLVLSWQY-CAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQ

Query:  TPMNEVDKASS--LIISKEIKGGGGFSNGHEINLKSGGNIALSHGGIISRKIKG
        T +N+  KA S  L I K+IKGGG  SN HE NL +G NIA SHGG +S K KG
Subjt:  TPMNEVDKASS--LIISKEIKGGGGFSNGHEINLKSGGNIALSHGGIISRKIKG

KAA0067982.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]1.0e-1746.43Show/hide
Query:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE
        M + RG KLF  + LV SWQYC KVDATF DVTGFF+  FD G+FGSGGVGIL + K                     G+  P  APSI P       N+
Subjt:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE

Query:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH
         D+ASS     +K I GG G SN  H+INLK  G + +SH
Subjt:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]4.7e-1543.87Show/hide
Query:  MAIARGFKLFPTLFLVLSWQY-CAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQ
        M +ARGF LF TL LV +W+Y CA+V ATFSD TG         F    FG   +G   N+ G++   ++    K   + AP G         I PV L+
Subjt:  MAIARGFKLFPTLFLVLSWQY-CAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQ

Query:  TPMNEVDKASS--LIISKEIKGGGG-FSNGHEINLKSGGNIALSHGGIISRKIKG
        T +N+ DK  S  L I K+IKGGG   S+ HE NL SG NIA SHGG +S K KG
Subjt:  TPMNEVDKASS--LIISKEIKGGGG-FSNGHEINLKSGGNIALSHGGIISRKIKG

TYK18141.1 keratin, type I cytoskeletal 9-like [Cucumis melo var. makuwa]1.7e-1746.43Show/hide
Query:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE
        M + RG KLF  + LV SWQYC KVDATF DVTGFF+  FD G+FGSGGVGIL + K                     G+  P  APSI P       N+
Subjt:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE

Query:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH
         D+ASS     +K I GG G SN  H+INLK  G + +SH
Subjt:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH

XP_031745100.1 cell wall protein IFF6 [Cucumis sativus]9.8e-2146.81Show/hide
Query:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE
        M+IA G KLF T+ L+L+WQYCAKVDATF DVTGFF+  F+LG+FGSGG GI+   K    P                    P++AP I PV   TP N 
Subjt:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE

Query:  VDKASSLI---ISKEIKGGGGFSNG-HEINLKSGGNIALSH
         D  +S      SK I GG   SNG H++NLK  G + LSH
Subjt:  VDKASSLI---ISKEIKGGGGFSNG-HEINLKSGGNIALSH

TrEMBL top hitse value%identityAlignment
A0A0A0K5G8 Uncharacterized protein4.7e-2146.81Show/hide
Query:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE
        M+IA G KLF T+ L+L+WQYCAKVDATF DVTGFF+  F+LG+FGSGG GI+   K    P                    P++AP I PV   TP N 
Subjt:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE

Query:  VDKASSLI---ISKEIKGGGGFSNG-HEINLKSGGNIALSH
         D  +S      SK I GG   SNG H++NLK  G + LSH
Subjt:  VDKASSLI---ISKEIKGGGGFSNG-HEINLKSGGNIALSH

A0A0A0K5J0 Uncharacterized protein8.1e-2146.39Show/hide
Query:  IARGFKLFPTLFLVLSWQYCAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPM
        +ARGFKLF TLFLV +WQ+C KVDATF+DVTG        +F    FG   +G   N  G++   +         + AP G         I PV L TP+
Subjt:  IARGFKLFPTLFLVLSWQYCAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPM

Query:  NEVDKASS--LIISKEIKGGGGFSNGHEINLKSGGNIALSHGGIISRKIKG-------GGEFGPRS
        N+ DK S+  L I K+I+ G   S  HEINLKSGGNIALSHGG IS K KG       GG+FG +S
Subjt:  NEVDKASS--LIISKEIKGGGGFSNGHEINLKSGGNIALSHGGIISRKIKG-------GGEFGPRS

A0A5A7U057 Ankyrin repeat protein8.4e-1845.45Show/hide
Query:  MAIARGFKLFPTLFLVLSWQY-CAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQ
        MA+ RGFKLF TL LV +W+Y CA+V ATF+D TG         F    FG   +G   N+ G +   +K    K   + AP G         I PV LQ
Subjt:  MAIARGFKLFPTLFLVLSWQY-CAKVDATFSDVTGF----FERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQ

Query:  TPMNEVDKASS--LIISKEIKGGGGFSNGHEINLKSGGNIALSHGGIISRKIKG
        T +N+  KA S  L I K+IKGGG  SN HE NL +G NIA SHGG +S K KG
Subjt:  TPMNEVDKASS--LIISKEIKGGGGFSNGHEINLKSGGNIALSHGGIISRKIKG

A0A5A7VI20 Keratin, type I cytoskeletal 9-like4.9e-1846.43Show/hide
Query:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE
        M + RG KLF  + LV SWQYC KVDATF DVTGFF+  FD G+FGSGGVGIL + K                     G+  P  APSI P       N+
Subjt:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE

Query:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH
         D+ASS     +K I GG G SN  H+INLK  G + +SH
Subjt:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH

A0A5D3D1L6 Keratin, type I cytoskeletal 9-like8.4e-1846.43Show/hide
Query:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE
        M + RG KLF  + LV SWQYC KVDATF DVTGFF+  FD G+FGSGGVGIL + K                     G+  P  APSI P       N+
Subjt:  MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNE

Query:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH
         D+ASS     +K I GG G SN  H+INLK  G + +SH
Subjt:  VDKASS--LIISKEIKGGGGFSN-GHEINLKSGGNIALSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATAGCAAGAGGTTTCAAGCTCTTCCCCACCCTTTTCTTGGTGCTTTCTTGGCAATATTGTGCCAAGGTCGATGCCACTTTTAGTGATGTCACCGGATTTTTTGA
ACGTAATTTCGACTTAGGTACATTTGGATCAGGTGGTGTTGGAATTCTTACAAACATAAAAGGTAACGTTGGACCCCATATAAAAACATTCCCTACAAAATTGGCACCAA
GTATTGCCCCTGTTGGGCTTCAAACTCCAAAATTGGCACCAAGTATTGGCCCTGTTTGGCTTCAAACTCCGATGAATGAAGTCGACAAAGCTTCGTCTCTTATAATTTCT
AAGGAGATCAAGGGTGGGGGTGGTTTTTCTAATGGCCATGAAATTAATTTGAAGAGTGGTGGCAATATTGCTCTTTCTCATGGTGGAATAATTAGTCGAAAGATAAAAGG
TGGTGGTGAATTTGGTCCAAGGAGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAACCCAAACATCTTTCCTTCCTAATTATCATCTGTGAAACCAGCTTGTGCCTTTCAACTTTTAACACATTCAATTACCATGGCTATAGCAAGAGGTTTCAAGCTCTTC
CCCACCCTTTTCTTGGTGCTTTCTTGGCAATATTGTGCCAAGGTCGATGCCACTTTTAGTGATGTCACCGGATTTTTTGAACGTAATTTCGACTTAGGTACATTTGGATC
AGGTGGTGTTGGAATTCTTACAAACATAAAAGGTAACGTTGGACCCCATATAAAAACATTCCCTACAAAATTGGCACCAAGTATTGCCCCTGTTGGGCTTCAAACTCCAA
AATTGGCACCAAGTATTGGCCCTGTTTGGCTTCAAACTCCGATGAATGAAGTCGACAAAGCTTCGTCTCTTATAATTTCTAAGGAGATCAAGGGTGGGGGTGGTTTTTCT
AATGGCCATGAAATTAATTTGAAGAGTGGTGGCAATATTGCTCTTTCTCATGGTGGAATAATTAGTCGAAAGATAAAAGGTGGTGGTGAATTTGGTCCAAGGAGCTGAGG
TATATTGATTTAATACATTGTCAAAATTGGCTTGAAGAGCAAGGGCAATGATATTATATACTAATGACGGGAATCAAAAACAGAGATCATTGCCTCACTTCCTTTCTCAT
TGAAACTTTTTCGTCAACGTTCTTCTTCCATTTTTATTTGTATACAGAGTTTGTCATTTCATCATTGTGCTCATTCACAATGAAGTCCTTTATTTCAACTTCACATTCAT
ACATTACATGGTGTAAATTTACATTAATTTGTTCGATAACATATAAAGTTGAAATGATTAGT
Protein sequenceShow/hide protein sequence
MAIARGFKLFPTLFLVLSWQYCAKVDATFSDVTGFFERNFDLGTFGSGGVGILTNIKGNVGPHIKTFPTKLAPSIAPVGLQTPKLAPSIGPVWLQTPMNEVDKASSLIIS
KEIKGGGGFSNGHEINLKSGGNIALSHGGIISRKIKGGGEFGPRS