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Clc09G06090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAnkyrin repeat protein
Genome locationClcChr09:4765441..4765810
RNA-Seq ExpressionClc09G06090
SyntenyClc09G06090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048667.1 Ankyrin repeat protein [Cucumis melo var. makuwa]8.7e-1151.79Show/hide
Query:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH
        S G VV+SHRGK G +   +SVVV+S QETRVK ++S VVSHGHGA MIRGG       +   KS+S      SH++Q +       +S SS VV HTHH
Subjt:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH

Query:  ITSSSISGSVVS
         T+S+I+GSVVS
Subjt:  ITSSSISGSVVS

KAA0048668.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.0e-1152.68Show/hide
Query:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH
        S G VV+SHRGK G +   +SVVVS+ QETRVK ++S VVSHGHGA MIRGG       +   KS+S      SH++QT+       +S SS V+ HTHH
Subjt:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH

Query:  ITSSSISGSVVS
         T+S+ISGSVVS
Subjt:  ITSSSISGSVVS

KGN44963.1 hypothetical protein Csa_016517 [Cucumis sativus]8.7e-1153.57Show/hide
Query:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV----------VKAGKS-TSSHSIQTSS------TSSSSSVVVSHTHH
        S   VV+SH+GK G +   +SVVV+S QETRVK ++S VVSHGHGAAMIRGG            ++ KS  SS++IQT+       TS SSSVVV HTHH
Subjt:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV----------VKAGKS-TSSHSIQTSS------TSSSSSVVVSHTHH

Query:  ITSSSISGSVVS
         T+S++SGSV S
Subjt:  ITSSSISGSVVS

TrEMBL top hitse value%identityAlignment
A0A0A0K662 Ankyrin repeat protein4.2e-1153.57Show/hide
Query:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV----------VKAGKS-TSSHSIQTSS------TSSSSSVVVSHTHH
        S   VV+SH+GK G +   +SVVV+S QETRVK ++S VVSHGHGAAMIRGG            ++ KS  SS++IQT+       TS SSSVVV HTHH
Subjt:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV----------VKAGKS-TSSHSIQTSS------TSSSSSVVVSHTHH

Query:  ITSSSISGSVVS
         T+S++SGSV S
Subjt:  ITSSSISGSVVS

A0A5A7U0E4 Ankyrin repeat protein5.0e-1252.68Show/hide
Query:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH
        S G VV+SHRGK G +   +SVVVS+ QETRVK ++S VVSHGHGA MIRGG       +   KS+S      SH++QT+       +S SS V+ HTHH
Subjt:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH

Query:  ITSSSISGSVVS
         T+S+ISGSVVS
Subjt:  ITSSSISGSVVS

A0A5A7U312 Ankyrin repeat protein4.2e-1151.79Show/hide
Query:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH
        S G VV+SHRGK G +   +SVVV+S QETRVK ++S VVSHGHGA MIRGG       +   KS+S      SH++Q +       +S SS VV HTHH
Subjt:  SSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGV------VKAGKSTS------SHSIQTSS-----TSSSSSVVVSHTHH

Query:  ITSSSISGSVVS
         T+S+I+GSVVS
Subjt:  ITSSSISGSVVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGCGGCAGTGGTATTGTTGCTGTATCTCATGGTAGCGAAATTAGCGAGTAGTGGCGGTGTTGTTGTTTCTCATAGAGGCAAAAACGGTGTGAGCGGTAGCGG
CAAGAGTGTCGTCGTGTCGAGCAGTCAGGAAACTAGAGTGAAGAGAAGCAGCAGTGTTGTTGTTTCTCATGGACATGGAGCTGCCATGATTCGTGGTGGTGTTGTAAAAG
CAGGCAAAAGCACTTCTTCTCATAGTATTCAAACAAGCAGTACCAGCAGCAGCAGCAGCGTTGTTGTTTCTCATACTCACCACATTACAAGCAGCAGCATTAGCGGTAGT
GTTGTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCATGGCGGCAGTGGTATTGTTGCTGTATCTCATGGTAGCGAAATTAGCGAGTAGTGGCGGTGTTGTTGTTTCTCATAGAGGCAAAAACGGTGTGAGCGGTAGCGG
CAAGAGTGTCGTCGTGTCGAGCAGTCAGGAAACTAGAGTGAAGAGAAGCAGCAGTGTTGTTGTTTCTCATGGACATGGAGCTGCCATGATTCGTGGTGGTGTTGTAAAAG
CAGGCAAAAGCACTTCTTCTCATAGTATTCAAACAAGCAGTACCAGCAGCAGCAGCAGCGTTGTTGTTTCTCATACTCACCACATTACAAGCAGCAGCATTAGCGGTAGT
GTTGTTTCTTAG
Protein sequenceShow/hide protein sequence
MVMAAVVLLLYLMVAKLASSGGVVVSHRGKNGVSGSGKSVVVSSSQETRVKRSSSVVVSHGHGAAMIRGGVVKAGKSTSSHSIQTSSTSSSSSVVVSHTHHITSSSISGS
VVS