; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G06130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAnkyrin repeat protein
Genome locationClcChr09:4777960..4782665
RNA-Seq ExpressionClc09G06130
SyntenyClc09G06130
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.3e-5264.44Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS
        QV ATF D TGV++ GLNH FSFRAFGWP IGT NV G+ITSTV  QI AEAP GIAPVGL T  NKE    S+  +II++IKGG  +SND E NL +G 
Subjt:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS

Query:  NIAFSHGGKISLKSKG---GKFGLKSNGNVISNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIV
        NIAFSHGGK+S+KSKG   G  G K NG + + NNK LSFGV I+K  VASLGLK  + KV+VGVS GGNIS+ KRGS+V
Subjt:  NIAFSHGGKISLKSKG---GKFGLKSNGNVISNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIV

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]7.6e-4860.62Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS
        QV ATF+D TGV++ GLNH FSFRAFGWP IGT NV GSI STV  QI AEAP GIAPVGL TP NK+D V S   +II++IKGG  VSND E  L SG 
Subjt:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS

Query:  NIAFSHGGKISLKSK---GGKFGLKSNGNVISNNNKALS--FGVDIRKQIVASL-----------GLKAPKRKVDVGVSDGGNISLKKRGSIV
        NIAFS+ GK+S+KSK    G  G K NG +   NNK LS  FGV+I+K  VASL           G+KA K KV+VGVS GGNIS+ KRGS+V
Subjt:  NIAFSHGGKISLKSK---GGKFGLKSNGNVISNNNKALS--FGVDIRKQIVASL-----------GLKAPKRKVDVGVSDGGNISLKKRGSIV

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]3.9e-3649.54Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFR-AFGWPRIGT-SNVGGSITST-VNNQIHAEAPT-GIAPVGLGT-PNNKEDIVSSFGHEIIRKIKGGAVVSNDDEIN
        +V ATF+D TG++ LG++H +SFR   G   +G  SN GGS TS+ V+ +   +APT  IAP GL T P  K        H+ +      A VS D +I+
Subjt:  QVSATFNDATGVIDLGLNHHFSFR-AFGWPRIGT-SNVGGSITST-VNNQIHAEAPT-GIAPVGLGT-PNNKEDIVSSFGHEIIRKIKGGAVVSNDDEIN

Query:  LKSGSNIAFSHGGKISLKSKGGKFGLKSNGN----------VISNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIVSNGDRIGL
         KSG NIA S GG   + + GGK G+KSN +           +S NNKALSFG++I K  VASLGLKA  RKV VGVS GGNIS+KKRGSIVSNG+  G 
Subjt:  LKSGSNIAFSHGGKISLKSKGGKFGLKSNGN----------VISNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIVSNGDRIGL

Query:  QSNANAYVSHGLGVHGTM
        +S  N   SHGLG+ GTM
Subjt:  QSNANAYVSHGLGVHGTM

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]1.6e-6968.2Show/hide
Query:  ATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGSNIA
        ATFND TGV++L LNHHFSFR FGWPRIGT N  GS+ STVNN  HAEAPTGIAPVGL TP NK D VS+FG EII++I+ G VVS D EINLKSG NIA
Subjt:  ATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGSNIA

Query:  FSHGGKISLKSK--------GGKFGLKSNGNVI---------SNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIVSNGDRIGLQ
         SHGGKISLK K        GGKFGLKS+GNV+         S NNK LSFGV+I+K  VASLGLKAPK K++ GVS GGNIS+KKRGSIVS G +IGL+
Subjt:  FSHGGKISLKSK--------GGKFGLKSNGNVI---------SNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIVSNGDRIGLQ

Query:  SNANAYVSHGLGVHGTM
        S+A  +VSHGLG+HG M
Subjt:  SNANAYVSHGLGVHGTM

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]5.6e-4364.63Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIK-GGAVVSNDDEINLKSG
        QV ATF+DATGV++ GLNH FSFRAFGWP IGT NV GSITSTV  QI AEAP GIAPVGL T  NKED V S+  +II++IK GGAVVS+D E NL SG
Subjt:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIK-GGAVVSNDDEINLKSG

Query:  SNIAFSHGGKISLKSKGGKFGLKSNGNVIS------NNNKALSFGVDIRKQIVASLGLKAPKRK
         NIAFSHGGK+S+KSKG   G  S+G  I+      +N K LSFGV+I+K   A+LGLKA K K
Subjt:  SNIAFSHGGKISLKSKGGKFGLKSNGNVIS------NNNKALSFGVDIRKQIVASLGLKAPKRK

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein1.5e-7067.73Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS
        +V ATFND TGV++L LNHHFSFR FGWPRIGT N  GS+ STVNN  HAEAPTGIAPVGL TP NK D VS+FG EII++I+ G VVS D EINLKSG 
Subjt:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS

Query:  NIAFSHGGKISLKSK--------GGKFGLKSNGNVI---------SNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIVSNGDRI
        NIA SHGGKISLK K        GGKFGLKS+GNV+         S NNK LSFGV+I+K  VASLGLKAPK K++ GVS GGNIS+KKRGSIVS G +I
Subjt:  NIAFSHGGKISLKSK--------GGKFGLKSNGNVI---------SNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIVSNGDRI

Query:  GLQSNANAYVSHGLGVHGTM
        GL+S+A  +VSHGLG+HG M
Subjt:  GLQSNANAYVSHGLGVHGTM

A0A0A0K7W7 Uncharacterized protein1.9e-5266.3Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIK-GGAVVSNDDEINLKSG
        QV ATF+DATGV++ GLNH FSFRAFGWP IGT +V GSITSTV  QIHAEAP GIAPVGL T  NKED V S+  +II++IK GGAVVS+D E NL SG
Subjt:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIK-GGAVVSNDDEINLKSG

Query:  SNIAFSHGGKISLKSKGGKFGLKSNGNVIS------NNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIV
         NIAFSHGGK+S+KSKG   G  S+G  I+      +N K LSFGV+I+K   A+LGLKA K KV+VGVS GGNIS+ KRGSIV
Subjt:  SNIAFSHGGKISLKSKGGKFGLKSNGNVIS------NNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIV

A0A0A0KAZ8 Uncharacterized protein6.1e-5166.3Show/hide
Query:  SATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIK-GGAVVSNDDEINLKSGSN
        SATF+DATGV++ GLNH FSFRAFGWP IGT NV GSITSTV  QI AEAP GIAPVGL T  NKED V S+  +II++IK GGAVVS+D E NL SG N
Subjt:  SATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIK-GGAVVSNDDEINLKSGSN

Query:  IAFSHGGKISLKSKGGKFGLKSNGNVIS------NNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSI
        IAFSHGGK+S+KSKG   G  S+G  I+      +N K LSFGV+I+K   A+LGLKA K KV+VGVS GGNIS+ KRGSI
Subjt:  IAFSHGGKISLKSKGGKFGLKSNGNVIS------NNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSI

A0A5A7U057 Ankyrin repeat protein6.5e-5364.44Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS
        QV ATF D TGV++ GLNH FSFRAFGWP IGT NV G+ITSTV  QI AEAP GIAPVGL T  NKE    S+  +II++IKGG  +SND E NL +G 
Subjt:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS

Query:  NIAFSHGGKISLKSKG---GKFGLKSNGNVISNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIV
        NIAFSHGGK+S+KSKG   G  G K NG + + NNK LSFGV I+K  VASLGLK  + KV+VGVS GGNIS+ KRGS+V
Subjt:  NIAFSHGGKISLKSKG---GKFGLKSNGNVISNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNISLKKRGSIV

A0A5A7U318 Ankyrin repeat protein3.7e-4860.62Show/hide
Query:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS
        QV ATF+D TGV++ GLNH FSFRAFGWP IGT NV GSI STV  QI AEAP GIAPVGL TP NK+D V S   +II++IKGG  VSND E  L SG 
Subjt:  QVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPVGLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGS

Query:  NIAFSHGGKISLKSK---GGKFGLKSNGNVISNNNKALS--FGVDIRKQIVASL-----------GLKAPKRKVDVGVSDGGNISLKKRGSIV
        NIAFS+ GK+S+KSK    G  G K NG +   NNK LS  FGV+I+K  VASL           G+KA K KV+VGVS GGNIS+ KRGS+V
Subjt:  NIAFSHGGKISLKSK---GGKFGLKSNGNVISNNNKALS--FGVDIRKQIVASL-----------GLKAPKRKVDVGVSDGGNISLKKRGSIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCAAGAGGTTTCAAGCTCCTCCACATCCTTTTCTTAGTGTTTACTTGGCAATATAGTGCCAAGGTGGGTGCCACTTTCGCTGATGTCACTGGCTTCTTTGA
TGGTAATTTCAACTCTGGTTCATTTGGGTCAGGTGGGGTCGGGATTCTTTCAAACCACCATGCTGACGCCACAAAAATTGTAGAGATAGGAATTGCTCCTGTTGGACTTA
AAACAGTACCAACAGATGAAGGCAACAAAGCTTTGCCGCCCGGTGTCGAAATTACTAAGAACATAAATATTGGGGCTGTTGTTTCTAATAATGATCATAAAACTAATATG
AAGATTGGTGGAAACATTGCTCCCTCTCATCATGGAATAATTAATCGAAAGATCAAAGGGAAAATCTTATTTAGCATACCTAGTGCTCACAATTTAGGAGACATCTCCAT
TGAGAATAATTTGAAAATATTGAATGGGAAAAGTGTAGCAAACCAAGTGAGTGCCACTTTCAATGATGCCACTGGTGTCATAGATCTCGGTCTCAACCATCATTTTTCTT
TTCGTGCGTTTGGATGGCCTCGTATTGGAACCTCGAATGTCGGTGGTAGCATCACATCAACCGTAAACAACCAAATACATGCAGAAGCACCAACAGGGATTGCTCCAGTT
GGGCTTGGAACTCCAAACAACAAAGAGGACATAGTTTCGTCTTTTGGTCATGAAATTATTAGGAAGATTAAAGGTGGTGCTGTTGTTTCAAATGATGATGAAATTAATTT
GAAGAGTGGTAGCAACATTGCTTTTTCTCATGGTGGCAAAATTAGTCTAAAGAGCAAAGGTGGTAAATTTGGATTAAAGAGCAATGGGAACGTGATTAGCAACAATAACA
AAGCTTTGTCTTTTGGTGTTGACATTAGAAAGCAAATTGTTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAAGGTTGACGTTGGTGTTTCGGATGGTGGTAATATTAGT
CTAAAGAAGAGAGGTAGTATTGTTTCAAATGGTGATAGAATTGGTTTGCAAAGCAATGCCAATGCTTATGTTTCTCATGGTCTTGGAGTTCATGGTACAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGCAAGAGGTTTCAAGCTCCTCCACATCCTTTTCTTAGTGTTTACTTGGCAATATAGTGCCAAGGTGGGTGCCACTTTCGCTGATGTCACTGGCTTCTTTGA
TGGTAATTTCAACTCTGGTTCATTTGGGTCAGGTGGGGTCGGGATTCTTTCAAACCACCATGCTGACGCCACAAAAATTGTAGAGATAGGAATTGCTCCTGTTGGACTTA
AAACAGTACCAACAGATGAAGGCAACAAAGCTTTGCCGCCCGGTGTCGAAATTACTAAGAACATAAATATTGGGGCTGTTGTTTCTAATAATGATCATAAAACTAATATG
AAGATTGGTGGAAACATTGCTCCCTCTCATCATGGAATAATTAATCGAAAGATCAAAGGGAAAATCTTATTTAGCATACCTAGTGCTCACAATTTAGGAGACATCTCCAT
TGAGAATAATTTGAAAATATTGAATGGGAAAAGTGTAGCAAACCAAGTGAGTGCCACTTTCAATGATGCCACTGGTGTCATAGATCTCGGTCTCAACCATCATTTTTCTT
TTCGTGCGTTTGGATGGCCTCGTATTGGAACCTCGAATGTCGGTGGTAGCATCACATCAACCGTAAACAACCAAATACATGCAGAAGCACCAACAGGGATTGCTCCAGTT
GGGCTTGGAACTCCAAACAACAAAGAGGACATAGTTTCGTCTTTTGGTCATGAAATTATTAGGAAGATTAAAGGTGGTGCTGTTGTTTCAAATGATGATGAAATTAATTT
GAAGAGTGGTAGCAACATTGCTTTTTCTCATGGTGGCAAAATTAGTCTAAAGAGCAAAGGTGGTAAATTTGGATTAAAGAGCAATGGGAACGTGATTAGCAACAATAACA
AAGCTTTGTCTTTTGGTGTTGACATTAGAAAGCAAATTGTTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAAGGTTGACGTTGGTGTTTCGGATGGTGGTAATATTAGT
CTAAAGAAGAGAGGTAGTATTGTTTCAAATGGTGATAGAATTGGTTTGCAAAGCAATGCCAATGCTTATGTTTCTCATGGTCTTGGAGTTCATGGTACAATGTAA
Protein sequenceShow/hide protein sequence
MAMARGFKLLHILFLVFTWQYSAKVGATFADVTGFFDGNFNSGSFGSGGVGILSNHHADATKIVEIGIAPVGLKTVPTDEGNKALPPGVEITKNINIGAVVSNNDHKTNM
KIGGNIAPSHHGIINRKIKGKILFSIPSAHNLGDISIENNLKILNGKSVANQVSATFNDATGVIDLGLNHHFSFRAFGWPRIGTSNVGGSITSTVNNQIHAEAPTGIAPV
GLGTPNNKEDIVSSFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGKISLKSKGGKFGLKSNGNVISNNNKALSFGVDIRKQIVASLGLKAPKRKVDVGVSDGGNIS
LKKRGSIVSNGDRIGLQSNANAYVSHGLGVHGTM