; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G06190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description60S ribosomal protein L22-2
Genome locationClcChr09:4812833..4814615
RNA-Seq ExpressionClc09G06190
SyntenyClc09G06190
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136027.1 60S ribosomal protein L22-2 [Cucumis sativus]6.8e-60100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

XP_022953729.1 60S ribosomal protein L22-2-like [Cucurbita moschata]1.7e-5898.36Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASG PKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

XP_022960081.1 60S ribosomal protein L22-2-like [Cucurbita moschata]3.4e-5999.18Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKG TFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

XP_022991268.1 60S ribosomal protein L22-2-like [Cucurbita maxima]3.4e-5998.36Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYEL+YFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

XP_023548993.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo]1.5e-5999.18Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

TrEMBL top hitse value%identityAlignment
A0A0A0K637 Uncharacterized protein3.3e-60100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

A0A1S3BRQ9 60S ribosomal protein L22-23.3e-60100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

A0A5D3D2W6 60S ribosomal protein L22-2-like3.3e-60100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

A0A6J1DLK6 60S ribosomal protein L22-23.3e-60100Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

A0A6J1JVR1 60S ribosomal protein L22-2-like1.6e-5998.36Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IASNKDRNVYEL+YFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

SwissProt top hitse value%identityAlignment
P47198 60S ribosomal protein L229.0e-3162.93Show/hide
Query:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK
        A GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++K
Subjt:  ASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNK

Query:  DRNVYELRYFNIAENE
        +   YELRYF I ++E
Subjt:  DRNVYELRYFNIAENE

Q98TF8 60S ribosomal protein L225.2e-3163.25Show/hide
Query:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN
        AA GG K KK+ + F +DC  PVED IMD A+ E+FL ERIKV GKAG LG   VT+ R K+KITV S+  FSKRYLKYLTKKYLKK+N+RDWLRV+A++
Subjt:  AASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDS-VTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASN

Query:  KDRNVYELRYFNIAENE
        K+   YELRYF I ++E
Subjt:  KDRNVYELRYFNIAENE

Q9FE58 60S ribosomal protein L22-33.9e-5082.64Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENE
        IA+NKDRN+YELRYFNIAENE
Subjt:  IASNKDRNVYELRYFNIAENE

Q9M9W1 60S ribosomal protein L22-23.5e-5183.61Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IA+NKDRN+YELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

Q9SRX7 Putative 60S ribosomal protein L22-13.0e-4269.35Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGGF
        IASNKD+NVYE+RYF I +    +
Subjt:  IASNKDRNVYELRYFNIAENEGGF

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family2.1e-4369.35Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R  A S G   KKKGV+FVIDC+KPV+D I++IA+LEKFL ERIKV GKAGALG+SV++TR   KI VN++SNFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEGGF
        IASNKD+NVYE+RYF I +    +
Subjt:  IASNKDRNVYELRYFNIAENEGGF

AT3G05560.1 Ribosomal L22e protein family2.5e-5283.61Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IA+NKDRN+YELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

AT3G05560.2 Ribosomal L22e protein family2.5e-5283.61Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IA+NKDRN+YELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

AT3G05560.3 Ribosomal L22e protein family2.5e-5283.61Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA    KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSVT+TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENEG
        IA+NKDRN+YELRYFNIAENEG
Subjt:  IASNKDRNVYELRYFNIAENEG

AT5G27770.1 Ribosomal L22e protein family2.7e-5182.64Show/hide
Query:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV
        MSRG AA+   KGKKKGV+F IDC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGDSV++TR+K+KITV +D  FSKRYLKYLTKKYLKKHNVRDWLRV
Subjt:  MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IASNKDRNVYELRYFNIAENE
        IA+NKDRN+YELRYFNIAENE
Subjt:  IASNKDRNVYELRYFNIAENE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTC
GTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATA
GCAATTTCTCCAAGAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTAT
GAATTGAGATACTTCAATATTGCCGAGAACGAGGGGGGATTTTGCCTGCTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGTGGAGCAGCCGCATCCGGTGGCCCGAAGGGGAAGAAGAAGGGCGTGACCTTCGTCATCGATTGTGCGAAGCCAGTCGAGGACAAGATCATGGACATCGCCTC
GTTGGAGAAGTTTCTTCTCGAGAGGATCAAGGTTGGCGGTAAAGCTGGCGCACTTGGTGACTCGGTTACCGTCACTCGAGACAAGAACAAGATCACCGTCAACTCCGATA
GCAATTTCTCCAAGAGGTATCTCAAATACTTGACTAAGAAGTATTTGAAGAAACACAACGTTAGAGATTGGCTTCGGGTTATTGCTTCAAACAAGGATCGAAATGTCTAT
GAATTGAGATACTTCAATATTGCCGAGAACGAGGGGGGATTTTGCCTGCTTCATTAA
Protein sequenceShow/hide protein sequence
MSRGAAASGGPKGKKKGVTFVIDCAKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVTVTRDKNKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVY
ELRYFNIAENEGGFCLLH