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Clc09G06270 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06270
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUsp domain-containing protein
Genome locationClcChr09:4849622..4851701
RNA-Seq ExpressionClc09G06270
SyntenyClc09G06270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067998.1 universal stress protein A-like protein [Cucumis melo var. makuwa]5.8e-2573.47Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        MVVGIDDSAHSLYALEWTLD      +  + SPFK       PS SSA+SLAGP      LPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

TYK18129.1 universal stress protein A-like protein [Cucumis melo var. makuwa]5.8e-2573.47Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        MVVGIDDSAHSLYALEWTLD      +  + SPFK       PS SSA+SLAGP      LPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

XP_004136030.1 universal stress protein PHOS34 [Cucumis sativus]1.3e-2471.57Show/hide
Query:  MVVGIDDSAHSLYALEWTLD----PSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVI
        MVVGIDDSAHSLYALEWTLD    P+   N     SPFK       PS SSAVSLAGP      LPYVDSDLKKIAARVIEKAKE+CLARSVHDV+LEVI
Subjt:  MVVGIDDSAHSLYALEWTLD----PSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVI

Query:  EG
        EG
Subjt:  EG

XP_008451574.1 PREDICTED: universal stress protein A-like protein [Cucumis melo]5.8e-2573.47Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        MVVGIDDSAHSLYALEWTLD      +  + SPFK       PS SSA+SLAGP      LPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

XP_038899903.1 universal stress protein PHOS34-like [Benincasa hispida]1.9e-2370.41Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        M+VGIDDSAHSLYALEWTLD      +  + SPFK       P  SSAVSLAGP      LPYVDSDLKKIAARVIEKAKEIC+ARSVHDVVLEV+EG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

TrEMBL top hitse value%identityAlignment
A0A0A0K626 Usp domain-containing protein6.3e-2571.57Show/hide
Query:  MVVGIDDSAHSLYALEWTLD----PSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVI
        MVVGIDDSAHSLYALEWTLD    P+   N     SPFK       PS SSAVSLAGP      LPYVDSDLKKIAARVIEKAKE+CLARSVHDV+LEVI
Subjt:  MVVGIDDSAHSLYALEWTLD----PSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVI

Query:  EG
        EG
Subjt:  EG

A0A1S3BRU9 universal stress protein A-like protein2.8e-2573.47Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        MVVGIDDSAHSLYALEWTLD      +  + SPFK       PS SSA+SLAGP      LPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

A0A5A7VJK7 Universal stress protein A-like protein2.8e-2573.47Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        MVVGIDDSAHSLYALEWTLD      +  + SPFK       PS SSA+SLAGP      LPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

A0A5D3D3W1 Universal stress protein A-like protein2.8e-2573.47Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        MVVGIDDSAHSLYALEWTLD      +  + SPFK       PS SSA+SLAGP      LPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

A0A6J1KSS5 universal stress protein PHOS342.0e-2366.67Show/hide
Query:  MVVGIDDSAHSLYALEWTLD----PSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVI
        MVVGIDDSAHSLYALEWTLD    P  ++N     SPFK       PSP+SAVSLAGP       P VDSDLK+IA+RVIEKAKE+C+ARSVHD VLEVI
Subjt:  MVVGIDDSAHSLYALEWTLD----PSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVI

Query:  EG
        EG
Subjt:  EG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein2.5e-1853.06Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        MVVG+DDS  S YALEWTLD            PFK       P+  SAV LAGP      +PYVD+DLK  AA+V+EKAK IC +RSVH  V+EV EG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG

AT3G11930.2 Adenine nucleotide alpha hydrolases-like superfamily protein7.9e-0429.41Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLT----------------SPFKS-SWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEIC
        MVV ID+S  S YAL+W +D  H SNLL  T                SPF   + F   P  ++AV  +  +     +  V    ++ +A ++ +A ++C
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLT----------------SPFKS-SWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEIC

Query:  LARSVHDVVLEVIEGGCQE
         A+ +    L V+EG  +E
Subjt:  LARSVHDVVLEVIEGGCQE

AT3G11930.3 Adenine nucleotide alpha hydrolases-like superfamily protein7.9e-0429.41Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLT----------------SPFKS-SWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEIC
        MVV ID+S  S YAL+W +D  H SNLL  T                SPF   + F   P  ++AV  +  +     +  V    ++ +A ++ +A ++C
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLT----------------SPFKS-SWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEIC

Query:  LARSVHDVVLEVIEGGCQE
         A+ +    L V+EG  +E
Subjt:  LARSVHDVVLEVIEGGCQE

AT5G49050.1 FUNCTIONS IN: molecular_function unknown4.8e-0939.8Show/hide
Query:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG
        +VVG+DDSAHS +ALE  LD        +    FK       P+ +  + +AGP   +  +P V+ DL K A  V +K  E+C A+SV    LEVIEG
Subjt:  MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTCGGAATCGATGATAGTGCGCACAGTCTCTACGCTCTCGAGTGGACCTTAGACCCATCTCATCGTTCCAATCTCCTCCGGTTAACCTCTCCGTTCAAGTCATC
GTGGTTCACGCCAAACCCTTCCCCTTCCTCCGCCGTCAGTCTCGCCGGACCCCTGGAGCGGCTGAGGTTCCTGCCCTATGTGGATTCGGATTTGAAGAAGATTGCTGCGC
GAGTAATCGAAAAGGCGAAGGAGATTTGCCTCGCTAGATCGGTGCATGATGTTGTGTTGGAGGTGATAGAAGGAGGATGCCAGGAATGTACTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTCGGAATCGATGATAGTGCGCACAGTCTCTACGCTCTCGAGTGGACCTTAGACCCATCTCATCGTTCCAATCTCCTCCGGTTAACCTCTCCGTTCAAGTCATC
GTGGTTCACGCCAAACCCTTCCCCTTCCTCCGCCGTCAGTCTCGCCGGACCCCTGGAGCGGCTGAGGTTCCTGCCCTATGTGGATTCGGATTTGAAGAAGATTGCTGCGC
GAGTAATCGAAAAGGCGAAGGAGATTTGCCTCGCTAGATCGGTGCATGATGTTGTGTTGGAGGTGATAGAAGGAGGATGCCAGGAATGTACTTTGTGAGGCTGTAGAAAA
GCACCATGCTTCTATGCTGGTTGTTGGAAGCCACGGATATGGAGCTATAAAGAGGGCTGTTTTGGGCAGCGTAAGTGATTATTGTGCTCATCATGCCCATTGCACCGTGA
TGATAGTAAAGAAGCCTAAAACCAAGCACTAGATCTCATTGCATTTACTCCTTTCCTC
Protein sequenceShow/hide protein sequence
MVVGIDDSAHSLYALEWTLDPSHRSNLLRLTSPFKSSWFTPNPSPSSAVSLAGPLERLRFLPYVDSDLKKIAARVIEKAKEICLARSVHDVVLEVIEGGCQECTL