CuGenDBv2

Gene ID	Clc09G06350
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	heat shock factor-binding protein 1
Genome location	ClcChr09:4916270..4919632
RNA-Seq Expression	Clc09G06350
Synteny	Clc09G06350
Gene Ontology terms	GO:0016192 - vesicle-mediated transport (biological process) GO:0045892 - negative regulation of transcription, DNA-templated (biological process) GO:0070370 - cellular heat acclimation (biological process) GO:0005634 - nucleus (cellular component) GO:0005829 - cytosol (cellular component) GO:0016020 - membrane (cellular component) GO:0003714 - transcription corepressor activity (molecular function)
InterPro domains	IPR009643 - Heat shock factor binding 1 IPR010989 - SNARE

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004136040.1 heat shock factor-binding protein isoform X2 [Cucumis sativus]

1.1e-26

80.9

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM   F  ++      +DEMGSRINELEQSINDLKAEMGVEGSPSPLPPSK  ADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

XP_008451602.1 PREDICTED: heat shock factor-binding protein 1 [Cucumis melo]

2.9e-27

82.02

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM   F  ++      +DEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKS ADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

XP_022150885.1 heat shock factor-binding protein 1 [Momordica charantia]

4.2e-26

79.78

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMT+FVQNLLQQM   F  ++      +DEMGSRINELEQSINDLKAEMGVEGSPSPLP SKS+ADE KKEEGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

XP_022991819.1 heat shock factor-binding protein 1-like isoform X2 [Cucurbita maxima]

7.2e-26

77.53

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT+FVQNLLQQM   F  ++      +DEMGSRINELEQSINDLK+EMGVEGSPSP+ PSKSSADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

XP_038899813.1 heat shock factor-binding protein isoform X1 [Benincasa hispida]

5.9e-28

83.15

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM   F  ++      +DEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSS+DEVKKEEGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BSN9 heat shock factor-binding protein 1

1.4e-27

82.02

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMTIFVQNLLQQM   F  ++      +DEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKS ADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1D9Q0 heat shock factor-binding protein 1

2.0e-26

79.78

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSEDAKQSTADMT+FVQNLLQQM   F  ++      +DEMGSRINELEQSINDLKAEMGVEGSPSPLP SKS+ADE KKEEGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1GMG8 heat shock factor-binding protein 1-like isoform X2

4.5e-26

77.53

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT+FVQNLLQQM   F  ++      +DEMGSRINELEQSINDLK+EMGVEGSPSP+ PSKSSADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1JVW1 heat shock factor-binding protein 1-like isoform X2

3.5e-26

77.53

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT+FVQNLLQQM   F  ++      +DEMGSRINELEQSINDLK+EMGVEGSPSP+ PSKSSADEVKK+EGSA
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

A0A6J1JXC9 heat shock factor-binding protein 1-like isoform X1

8.5e-25

76.74

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEE
        MDGHDSED KQSTADMT+FVQNLLQQM   F  ++      +DEMGSRINELEQSINDLK+EMGVEGSPSP+ PSKSSADEVKK+E
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEE

SwissProt top hits

e value

%identity

Alignment

Q8GW48 Heat shock factor-binding protein

1.4e-19

62.92

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT FVQNLLQQM   F  ++      +D+MG RINELEQSINDL+AEMGVEG+P   PP+  S DE K    S+
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

Arabidopsis top hits

e value

%identity

Alignment

AT4G15802.1 heat shock factor binding protein

9.6e-21

62.92

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Query:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA
        MDGHDSED KQSTADMT FVQNLLQQM   F  ++      +D+MG RINELEQSINDL+AEMGVEG+P   PP+  S DE K    S+
Subjt:  MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLN-----ILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

Sequences

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CDS sequence

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atggatgggcatgactctgaagatgcaaagcaaagcacggctgatatgaccatttttgtgcaaaatcttcttcaacagatgagtttcactttctttaacttgaatatact
cgatgagatggggagccgcataaatgaattggagcagagcatcaacgacctaaaggccgagatgggtgtcgagggctctccgtcgccgctgcctccttcaaagtcaagtg
cagatgaagtgaagaaagaggaaggttctgcctag

mRNA sequence

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Protein sequence

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MDGHDSEDAKQSTADMTIFVQNLLQQMSFTFFNLNILDEMGSRINELEQSINDLKAEMGVEGSPSPLPPSKSSADEVKKEEGSA

Clc09G06350 (gene) of Watermelon (cordophanus) v2 genome