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Clc09G06640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein no-on-transient A-like
Genome locationClcChr09:5188889..5189770
RNA-Seq ExpressionClc09G06640
SyntenyClc09G06640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]9.9e-1352.14Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTG-SRKSAANRSRVAS
        MAA++ L+S+AL+ALLFFSESL T        S+SLTG+  RNILHT  H+I + +VESS + K N        RIRPI      G   KSA NRSRVAS
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTG-SRKSAANRSRVAS

Query:  FGFGFLL---FFLGLFL
        F  G +L    FLGLFL
Subjt:  FGFGFLL---FFLGLFL

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]6.0e-2667.83Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIK-AKGGRIRPIATGAG-TGSRKSAANRSRVA
        MAA+KSLL ++L+ALLFFSESL+TSAA+  GASNS+TGMLRRN+L T  H+IAD      +E KMN HIK   GGRIRP+A G G TG+RKSAA+RS+VA
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIK-AKGGRIRPIATGAG-TGSRKSAANRSRVA

Query:  SFGFGFLLFFLGLFL
        SFG GFLLFF  LFL
Subjt:  SFGFGFLLFFLGLFL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2566.37Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTGSRKSAANRSRVASF
        MAA+KSL+S+AL+ALL FSESL  SA +R G SNSLTGMLRRN+L T  HQIADN+VESS E KMN HIK    R+RP+A    TG+R SAANRSR+AS 
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTGSRKSAANRSRVASF

Query:  GFGFLLFFLGLFL
        G G +L  LGLFL
Subjt:  GFGFLLFFLGLFL

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]4.6e-2667.54Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKG-GRIRPIATGAGTGSRKSAANRSRVAS
        MAA+KSL+S++L+ALLFFSESL+TSAAN  GASNS+T MLRRNIL T  H+IAD      +E KMN  IK  G GR RPI  G GTG+R SAANRSRV S
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKG-GRIRPIATGAGTGSRKSAANRSRVAS

Query:  FGFGFLLFFLGLFL
        FG GFLLFF GL L
Subjt:  FGFGFLLFFLGLFL

XP_008451666.1 PREDICTED: protein no-on-transient A-like [Cucumis melo]9.0e-1446.48Show/hide
Query:  MAAVKSLLSLALIALLFFSESL-ATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKM-NAHIK-----------------AKGGR------
        MAA+K+ + ++L+ALLFF E L       RG  SNS+TG+L R IL T  H+ A +NVESS+E KM N H+K                  +GGR      
Subjt:  MAAVKSLLSLALIALLFFSESL-ATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKM-NAHIK-----------------AKGGR------

Query:  ----IRPIATGAGTGSRKSAANRSRVASFGFGFLLFFLGLFL
             R    G GTG  KSAANRS VASFG GFLLF LGLF+
Subjt:  ----IRPIATGAGTGSRKSAANRSRVASFGFGFLLFFLGLFL

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein2.2e-2667.54Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKG-GRIRPIATGAGTGSRKSAANRSRVAS
        MAA+KSL+S++L+ALLFFSESL+TSAAN  GASNS+T MLRRNIL T  H+IAD      +E KMN  IK  G GR RPI  G GTG+R SAANRSRV S
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKG-GRIRPIATGAGTGSRKSAANRSRVAS

Query:  FGFGFLLFFLGLFL
        FG GFLLFF GL L
Subjt:  FGFGFLLFFLGLFL

A0A1S3BRF6 protein no-on-transient A-like4.4e-1446.48Show/hide
Query:  MAAVKSLLSLALIALLFFSESL-ATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKM-NAHIK-----------------AKGGR------
        MAA+K+ + ++L+ALLFF E L       RG  SNS+TG+L R IL T  H+ A +NVESS+E KM N H+K                  +GGR      
Subjt:  MAAVKSLLSLALIALLFFSESL-ATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKM-NAHIK-----------------AKGGR------

Query:  ----IRPIATGAGTGSRKSAANRSRVASFGFGFLLFFLGLFL
             R    G GTG  KSAANRS VASFG GFLLF LGLF+
Subjt:  ----IRPIATGAGTGSRKSAANRSRVASFGFGFLLFFLGLFL

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like1.5e-1152.48Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTG-SRKSAANRSRVAS
        MAA++ L+S+AL+ALLFFSESL T        S+SLTG+  RNILHT  H+I + +VESS + K N        RIRPI      G   KSA NRSRVAS
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTG-SRKSAANRSRVAS

Query:  F
        F
Subjt:  F

A0A5A7VLE5 Protein no-on-transient A-like2.9e-2667.83Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIK-AKGGRIRPIATGAG-TGSRKSAANRSRVA
        MAA+KSLL ++L+ALLFFSESL+TSAA+  GASNS+TGMLRRN+L T  H+IAD      +E KMN HIK   GGRIRP+A G G TG+RKSAA+RS+VA
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIK-AKGGRIRPIATGAG-TGSRKSAANRSRVA

Query:  SFGFGFLLFFLGLFL
        SFG GFLLFF  LFL
Subjt:  SFGFGFLLFFLGLFL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like4.8e-1352.14Show/hide
Query:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTG-SRKSAANRSRVAS
        MAA++ L+S+AL+ALLFFSESL T        S+SLTG+  RNILHT  H+I + +VESS + K N        RIRPI      G   KSA NRSRVAS
Subjt:  MAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMNAHIKAKGGRIRPIATGAGTG-SRKSAANRSRVAS

Query:  FGFGFLL---FFLGLFL
        F  G +L    FLGLFL
Subjt:  FGFGFLL---FFLGLFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCGAAACTCAAACGCATCTTCCTACTTTTCTCTATTTATATAATATAAATTTCAATCAATTACACATTATTCCTTCATCTCCAATTTCTTCCATTCTCTTCTT
TTATCAAACACAACGCCCAAAAATGGCTGCCGTCAAATCCCTACTTTCATTAGCTCTTATCGCCCTTCTGTTCTTCTCCGAATCCCTAGCCACTTCTGCCGCCAATCGCG
GCGGCGCTTCCAATTCTCTTACCGGAATGCTCCGCCGGAACATCCTTCACACGCCGGTTCATCAAATTGCAGATAACAATGTCGAGTCCTCTACCGAACTGAAGATGAAT
GCTCATATCAAAGCTAAAGGGGGGCGGATTCGACCTATAGCGACTGGCGCTGGCACTGGCAGCCGTAAATCGGCGGCGAATCGGAGCCGAGTCGCTTCTTTTGGCTTTGG
ATTTCTGCTCTTCTTTTTGGGATTGTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
TGAAAACACGCCAAAACCAAAAGGTCCCAAAAGAAATTCAAAGGTCATCAATGGCGGCCGAAACTCAAACGCATCTTCCTACTTTTCTCTATTTATATAATATAAATTTC
AATCAATTACACATTATTCCTTCATCTCCAATTTCTTCCATTCTCTTCTTTTATCAAACACAACGCCCAAAAATGGCTGCCGTCAAATCCCTACTTTCATTAGCTCTTAT
CGCCCTTCTGTTCTTCTCCGAATCCCTAGCCACTTCTGCCGCCAATCGCGGCGGCGCTTCCAATTCTCTTACCGGAATGCTCCGCCGGAACATCCTTCACACGCCGGTTC
ATCAAATTGCAGATAACAATGTCGAGTCCTCTACCGAACTGAAGATGAATGCTCATATCAAAGCTAAAGGGGGGCGGATTCGACCTATAGCGACTGGCGCTGGCACTGGC
AGCCGTAAATCGGCGGCGAATCGGAGCCGAGTCGCTTCTTTTGGCTTTGGATTTCTGCTCTTCTTTTTGGGATTGTTCTTGTGAAATCTGATTCATTCGTTTCTGTAAAA
ATTGGGATTTGTTTTGTTTCCTTCGTTATATATATTTTATTTTTATTTGATGAATGCCCAATTTGTTTTAACTCGAAAAATAGCTTAGAAAGTTAACTATTTTGAATTTT
GGCTGTTGGAAATTTCTTCCCTATTATATCTCTATTGTATCTGTTTCACATTTATAATTATACCTTAAAAATTCTTATTTTTTTCAAATATATTACTTATTGTTCTAAGT
ATAATTGGTCCACAATTATGTTTTATTTTGAATTATGAGACCACAACATTGGAAACACAAGTATTAGTAGCTCTGTGTAAAATTTTATATATATATATAAAAAAGTATCG
AC
Protein sequenceShow/hide protein sequence
MAAETQTHLPTFLYLYNINFNQLHIIPSSPISSILFFYQTQRPKMAAVKSLLSLALIALLFFSESLATSAANRGGASNSLTGMLRRNILHTPVHQIADNNVESSTELKMN
AHIKAKGGRIRPIATGAGTGSRKSAANRSRVASFGFGFLLFFLGLFL