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Clc09G06660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationClcChr09:5196861..5197187
RNA-Seq ExpressionClc09G06660
SyntenyClc09G06660
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]9.5e-2368.18Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFEVGSV
        MAA R L+SIALLALLF FSES+ TS+SLTGIP R++  T AH I   SV ESS  RKSN  H + RRRIRP+LI GSN  H KSA N SRVASFEVGS+
Subjt:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFEVGSV

Query:  LSICILLGLF
        L ICI LGLF
Subjt:  LSICILLGLF

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1253.91Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPT--------SNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPKSAANWSRVASF
        MAA +SL+S+ALLALL +FSES+          SNSLTG+ RR+V QTAAH I  +SV ESS  RK N   +  +RR+RPV  G+    SAAN SR+AS 
Subjt:  MAAFRSLLSIALLALLFIFSESIPT--------SNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPKSAANWSRVASF

Query:  EVGSVLSICILLGLF
         VGSVL   ++LGLF
Subjt:  EVGSVLSICILLGLF

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]4.6e-0950Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPT--------SNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPK-SAANWSRVAS
        MAA ++LLSIAL+ALL +F ES+PT        S SL GI RR++ QT A               K  N HI+ R R+RPVLIG   PK SAAN SR A 
Subjt:  MAAFRSLLSIALLALLFIFSESIPT--------SNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPK-SAANWSRVAS

Query:  FEVGSVLSICILLGLF
          VGS+L I +LLGLF
Subjt:  FEVGSVLSICILLGLF

XP_008451651.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]6.0e-1766.67Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFE
        MAA R L+SIALLALLF FSES+ TS+SLTGIP R++  T AH I   SV ESS  RKSN  H + RRRIRP+LI GSN  H KSA N SRVASFE
Subjt:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFE

XP_022992473.1 uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]1.1e-0538.79Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPTS--------NSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPK-SAANWSRVAS
        MA  +SL+SIALLALL +F E +P S        + L G+ R D  QTA     +   +  + +    +F  + RRR R  +  +  P  S+ANWSR +S
Subjt:  MAAFRSLLSIALLALLFIFSESIPTS--------NSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPK-SAANWSRVAS

Query:  FEVGSVLSICILLGLF
        F VGS+L +C + GLF
Subjt:  FEVGSVLSICILLGLF

TrEMBL top hitse value%identityAlignment
A0A0A0K929 Uncharacterized protein9.9e-1860.53Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESS-SLRKSNNFHIE--ARRRIRPVLIGS---NHPKSAANW-SRVASFE
        MAA R LLSIA LA LF FSES+ TS+SLTGIP R +  TAAH I   SV  SS  +RKSN  HI+   +RR  P+L+ S   NH KSAAN  S VAS E
Subjt:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESS-SLRKSNNFHIE--ARRRIRPVLIGS---NHPKSAANW-SRVASFE

Query:  VGSVLSICILLGLF
        VGS+L ICI LGLF
Subjt:  VGSVLSICILLGLF

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like2.9e-1766.67Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFE
        MAA R L+SIALLALLF FSES+ TS+SLTGIP R++  T AH I   SV ESS  RKSN  H + RRRIRP+LI GSN  H KSA N SRVASFE
Subjt:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFE

A0A5A7VLE5 Protein no-on-transient A-like5.1e-0646.85Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPT--------SNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIE--ARRRIRPVLIG---SNHPKSAANWS
        MAA +SLL I+LLALLF FSES+ T        SNS+TG+ RR+V QTA H I  S            N HI+     RIRPV  G   + + KSAA+ S
Subjt:  MAAFRSLLSIALLALLFIFSESIPT--------SNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIE--ARRRIRPVLIG---SNHPKSAANWS

Query:  RVASFEVGSVL
        +VASF +G +L
Subjt:  RVASFEVGSVL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like4.6e-2368.18Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFEVGSV
        MAA R L+SIALLALLF FSES+ TS+SLTGIP R++  T AH I   SV ESS  RKSN  H + RRRIRP+LI GSN  H KSA N SRVASFEVGS+
Subjt:  MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLI-GSN--HPKSAANWSRVASFEVGSV

Query:  LSICILLGLF
        L ICI LGLF
Subjt:  LSICILLGLF

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X15.1e-0638.79Show/hide
Query:  MAAFRSLLSIALLALLFIFSESIPTS--------NSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPK-SAANWSRVAS
        MA  +SL+SIALLALL +F E +P S        + L G+ R D  QTA     +   +  + +    +F  + RRR R  +  +  P  S+ANWSR +S
Subjt:  MAAFRSLLSIALLALLFIFSESIPTS--------NSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPK-SAANWSRVAS

Query:  FEVGSVLSICILLGLF
        F VGS+L +C + GLF
Subjt:  FEVGSVLSICILLGLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTTCAGATCCCTACTTTCCATAGCTCTCTTGGCTCTTCTCTTCATCTTCTCCGAATCAATACCCACTTCCAATTCTCTTACAGGAATCCCTCGCCGGGACGT
CTTTCAGACGGCGGCTCATTGGATTACAAAAAGCAGTGTTATTGAGTCCTCTTCCCTAAGGAAATCCAATAATTTCCATATCGAAGCTAGAAGGCGGATTCGACCTGTAC
TAATCGGCAGCAACCATCCTAAATCGGCCGCAAATTGGAGCCGAGTAGCATCCTTTGAGGTTGGATCTGTGTTGTCTATTTGCATTTTATTGGGATTGTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTTCAGATCCCTACTTTCCATAGCTCTCTTGGCTCTTCTCTTCATCTTCTCCGAATCAATACCCACTTCCAATTCTCTTACAGGAATCCCTCGCCGGGACGT
CTTTCAGACGGCGGCTCATTGGATTACAAAAAGCAGTGTTATTGAGTCCTCTTCCCTAAGGAAATCCAATAATTTCCATATCGAAGCTAGAAGGCGGATTCGACCTGTAC
TAATCGGCAGCAACCATCCTAAATCGGCCGCAAATTGGAGCCGAGTAGCATCCTTTGAGGTTGGATCTGTGTTGTCTATTTGCATTTTATTGGGATTGTTCTTCTGA
Protein sequenceShow/hide protein sequence
MAAFRSLLSIALLALLFIFSESIPTSNSLTGIPRRDVFQTAAHWITKSSVIESSSLRKSNNFHIEARRRIRPVLIGSNHPKSAANWSRVASFEVGSVLSICILLGLFF