CuGenDBv2

Gene ID	Clc09G06760
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Auxin response factor
Genome location	ClcChr09:5289361..5290737
RNA-Seq Expression	Clc09G06760
Synteny	Clc09G06760
Gene Ontology terms	GO:0003855 - 3-dehydroquinate dehydratase activity (molecular function) GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148887.1 uncharacterized protein LOC101222027 [Cucumis sativus]

6.0e-78

83.52

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIP  +HVSIT SS+    FS PF SRKRAI F   CP+I+ CN   HAQTT RSYIRNGPPYGEEDDDPE++VESLRVPD+WSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNV+ISKVAA SYYNSLLKK TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_008451429.1 PREDICTED: uncharacterized protein LOC103492727 [Cucumis melo]

6.4e-80

85.71

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIP ++HVSIT SS F   FS  F+SRKRAINF   CP+ L  NG  HAQTT RSYIRNGPPYGEEDDDPE++VESLRVPD+WSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKK TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_022150155.1 uncharacterized protein LOC111018405 [Momordica charantia]

3.1e-82

85.71

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIPA++HVS++ SS F SDF +PFT+ KRAINF+ SCP+IL  NG+RHAQTTPRSY R GPPYGEEDDDPE+QVESLRVPDDWSVP+KALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDDEYCPEETNVEIS+VAANSYYNSLL+KRTDLGDILL MARELESISYKESFHGAF SANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_023515033.1 uncharacterized protein LOC111779179 [Cucurbita pepo subsp. pepo]

4.3e-76

82.42

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLIL+P+++HVSIT SS F SDFS+ FTSRKRA+NF+ S P+IL CN +   + TPRSYIR GPPYG++DDDPE QVESLRVPD WSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNVEISKVAA SYYNSLL+KRT+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

XP_038896861.1 uncharacterized protein LOC120085084 [Benincasa hispida]

3.4e-89

92.31

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIPA++HV IT SSLF S FS+PFTSRKRAINFQP CP+IL CNGLRHAQ TPRSYI NGPPYGEEDDDPE+QVESLRVPDDWSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LR TLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5Q9 Uncharacterized protein

2.9e-78

83.52

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIP  +HVSIT SS+    FS PF SRKRAI F   CP+I+ CN   HAQTT RSYIRNGPPYGEEDDDPE++VESLRVPD+WSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNV+ISKVAA SYYNSLLKK TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A1S3BS97 uncharacterized protein LOC103492727

3.1e-80

85.71

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIP ++HVSIT SS F   FS  F+SRKRAINF   CP+ L  NG  HAQTT RSYIRNGPPYGEEDDDPE++VESLRVPD+WSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKK TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A5D3D403 Uncharacterized protein

3.1e-80

85.71

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIP ++HVSIT SS F   FS  F+SRKRAINF   CP+ L  NG  HAQTT RSYIRNGPPYGEEDDDPE++VESLRVPD+WSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKK TDLG+ILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A6J1D9Y8 uncharacterized protein LOC111018405

1.5e-82

85.71

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLILIPA++HVS++ SS F SDF +PFT+ KRAINF+ SCP+IL  NG+RHAQTTPRSY R GPPYGEEDDDPE+QVESLRVPDDWSVP+KALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLDDEYCPEETNVEIS+VAANSYYNSLL+KRTDLGDILL MARELESISYKESFHGAF SANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

A0A6J1H695 uncharacterized protein LOC111460840

6.1e-76

81.87

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Query:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW
        MESLIL+P+++HVSIT SS F SDF + FTSRKRA+NF+ S P+IL CN +   + TPRSYIR GPPYG++DDDPE QVESLRVPD WSVPSKALEESEW
Subjt:  MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
        LRVTLHKWLD+EYCPEETNVEISKVAA SYYNSLL+KRT+L DILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G03150.1 unknown protein

5.1e-43

54.55

Show/hide

Query:  PFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYI-RNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEWLRVTLHKWLDDEYCPEETNVEISKVA
        P T R+R+++F  +  +  +   +  A   P   + ++     E ++D E  V++L +P++W +PS+A+EESEWLRVTLHKWLDDEYCPE TNVEIS+VA
Subjt:  PFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYI-RNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEWLRVTLHKWLDDEYCPEETNVEISKVA

Query:  ANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE
        A SYY+SLL+K +D+G+ILL MA++L SISY+ESFHGAF+SANAA+NLI  RIE
Subjt:  ANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIE

Sequences

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CDS sequence

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ATGGAGTCTCTGATTTTGATTCCAGCAAATCAACACGTTTCAATCACAGTTTCTTCTTTATTCTTCTCCGATTTCTCCCTTCCATTCACCTCTAGAAAGCGCGCCATCAA
TTTCCAACCATCTTGTCCAAAGATTCTCCTTTGCAATGGCCTTCGACATGCGCAAACAACTCCGAGGTCTTATATTCGAAATGGCCCGCCGTATGGTGAGGAAGACGATG
ATCCTGAAATGCAGGTTGAAAGCCTCAGGGTTCCTGATGATTGGTCCGTTCCTTCCAAGGCATTGGAGGAATCAGAATGGCTTAGGGTTACCTTGCATAAATGGTTAGAT
GATGAATATTGTCCAGAGGAAACTAATGTAGAGATAAGCAAGGTTGCTGCAAATTCATACTACAATTCTTTGTTAAAGAAGAGGACAGACCTAGGCGATATTTTGTTGAA
TATGGCAAGAGAATTGGAATCTATTTCCTATAAGGAAAGTTTTCACGGTGCATTCTCTTCTGCCAATGCAGCAGTGAATTTAATTGCTCAAAGAATAGAGCTGTCTTAA

mRNA sequence

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Protein sequence

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MESLILIPANQHVSITVSSLFFSDFSLPFTSRKRAINFQPSCPKILLCNGLRHAQTTPRSYIRNGPPYGEEDDDPEMQVESLRVPDDWSVPSKALEESEWLRVTLHKWLD
DEYCPEETNVEISKVAANSYYNSLLKKRTDLGDILLNMARELESISYKESFHGAFSSANAAVNLIAQRIELS

Clc09G06760 (gene) of Watermelon (cordophanus) v2 genome