| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6593155.1 U1 small nuclear ribonucleoprotein C, partial [Cucurbita argyrosperma subsp. sororia] | 5.8e-95 | 92.82 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG PGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
IRPPV PRP+PGAPGY+P PTMPPMM PPGA MPGQVN+PSRPPPPAPIPGS PQPSSTNGAPL AP YQANP APGSGGYDSFTTMAQPSESN
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
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| XP_004148886.1 U1 small nuclear ribonucleoprotein C [Cucumis sativus] | 2.8e-97 | 94.92 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
IRPPVLPRPIPGAPGY+P PTMPPMM PPGAP+PGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPS YQANP APGSGGYDSFT+MAQP SESNH
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
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| XP_008451425.1 PREDICTED: U1 small nuclear ribonucleoprotein C [Cucumis melo] | 4.8e-97 | 94.92 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
IRPPVLPRPIPGAPGY+P PTMPPMM PPGAP+PGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS YQANP APGSGGYDSFT+MAQP SESNH
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
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| XP_023515032.1 U1 small nuclear ribonucleoprotein C [Cucurbita pepo subsp. pepo] | 1.7e-94 | 93.33 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
IRPPV PRP+PGAPGY+P PTMPPMM PPGA MPGQVNIPSRPPPPAPIPGS QPSSTNGAPL AP YQANP APGSGGYDSFTTMAQPSESN
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
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| XP_038899936.1 U1 small nuclear ribonucleoprotein C isoform X1 [Benincasa hispida] | 3.0e-99 | 95.41 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESNH
IRPPVLPRP+PGAPGY+PAPTMPPMM PPGAPMPGQVNIP+RPPPPAP+PGSAPQPSSTNGAPLA PSMYQANP APGSGGY+SFTTMAQPSE NH
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESNH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K515 U1 small nuclear ribonucleoprotein C | 1.3e-97 | 94.92 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
IRPPVLPRPIPGAPGY+P PTMPPMM PPGAP+PGQVNIPSRPPPPAP+PGSAPQPSSTNGAPLAAPS YQANP APGSGGYDSFT+MAQP SESNH
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
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| A0A1S3BS92 U1 small nuclear ribonucleoprotein C | 2.3e-97 | 94.92 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
IRPPVLPRPIPGAPGY+P PTMPPMM PPGAP+PGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS YQANP APGSGGYDSFT+MAQP SESNH
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
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| A0A5A7UNW2 U1 small nuclear ribonucleoprotein C | 2.3e-97 | 94.92 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAA+NQHLLGQRPRLPVLPTPV+PGAAPGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
IRPPVLPRPIPGAPGY+P PTMPPMM PPGAP+PGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPS YQANP APGSGGYDSFT+MAQP SESNH
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQP-SESNH
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| A0A6J1H7P8 U1 small nuclear ribonucleoprotein C | 1.8e-94 | 92.82 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
IRPPV PRP+PGAPGY+P PTMPPMM PPGA MPGQVN+PSRPPPPAPIPGS PQ SSTNGAPL AP YQANP APGSGGYDSFTTMAQPSESN
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
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| A0A6J1KWY5 U1 small nuclear ribonucleoprotein C | 1.1e-94 | 92.82 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPG APGLMPG
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
IRPPV PRP+PGAPGY+P PTMPPMM PPGA MPGQVN+PSRPPPPAPIPGS QPSSTNGAPL AP YQANP APGSGGYDSFTTMAQPSESN
Subjt: IRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPMPGQVNIPSRPPPPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGGYDSFTTMAQPSESN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XW44 U1 small nuclear ribonucleoprotein C | 1.4e-19 | 48.34 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ +A A ++ A + +G P PV P+M G PG MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMPG
Query: IRPPVLPRP---IPGAPGYVPAPTMPPM--MGPPGAPMPGQVNIPSRPPPP
+ P P P PGAPG P P PPM GPPG P P P PP
Subjt: IRPPVLPRP---IPGAPGYVPAPTMPPM--MGPPGAPMPGQVNIPSRPPPP
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| C5XYW4 U1 small nuclear ribonucleoprotein C-2 | 1.6e-50 | 59.57 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGAAP
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP P
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGAAP
Query: --GLMPGIRPPVLPRP----IPGAPGYVPAPTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQANPTA
LMPG+RPP+LP P PGAP +P P PP M PGAP PG + P PP P P P + P P+S GAP+ A P++YQANP A
Subjt: --GLMPGIRPPVLPRP----IPGAPGYVPAPTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQANPTA
Query: PG---SGGYDSFTTMAQ-------PSESNH
P SG + T Q PSE NH
Subjt: PG---SGGYDSFTTMAQ-------PSESNH
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| C5XZK6 U1 small nuclear ribonucleoprotein C-1 | 1.3e-49 | 60.09 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGA--
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAAAF Q GA +NQH+L RPRLP+LPTP MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMPGA--
Query: -APG--LMPGIRPPVLPRP-IPGAPGYVPA---PTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQAN
APG LMPG+RPP+LP P IPG PG P P PP M PGAP PG + P PP P P P + P P+S GAP+ A P++YQ N
Subjt: -APG--LMPGIRPPVLPRP-IPGAPGYVPA---PTMPP-MMGPPGAPMPGQVNIPSRPP-------PPAPIPGSAPQPSS-TNGAPL----AAPSMYQAN
Query: PTAPG---SGGYDSFTT-------MAQPSESNH
P AP SG + T AQPSE NH
Subjt: PTAPG---SGGYDSFTT-------MAQPSESNH
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| F6HQ26 U1 small nuclear ribonucleoprotein C | 1.2e-66 | 69.77 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMP--GA
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ AAFQQVGAAYNQHL+ RPRLPVLPTP MP G+
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLG-----QRPRLPVLPTPVMP--GA
Query: AP-----GLMPGIRPPVLPRPIPGAPGYVPAPTMPPMMGPPGA---PMPGQVNIPSRPP----PPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGG
AP L+PG+RPPVLPRP+PGAPGY+PAP MP MM PPGA PMP ++P RPP PPA +PGS P+S + MYQANP P SGG
Subjt: AP-----GLMPGIRPPVLPRPIPGAPGYVPAPTMPPMMGPPGA---PMPGQVNIPSRPP----PPAPIPGSAPQPSSTNGAPLAAPSMYQANPTAPGSGG
Query: YDSFTTMAQPSESNH
+DSF AQ E+NH
Subjt: YDSFTTMAQPSESNH
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| Q56XE4 U1 small nuclear ribonucleoprotein C | 6.5e-49 | 61.11 | Show/hide |
Query: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMP-
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ +QQVGA +NQH+L RPR P++ PG MP
Subjt: MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGAAYNQHLLGQRPRLPVLPTPVMPGAAPGLMP-
Query: GIRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPM-PGQVNIPSRPPPPAPIPGS-------APQPSSTNGAP-----LAAPSMYQANPTAPGSGGYDS
G+RPPVLPRP+ GY+P P +P MM PPGAP+ P N RPP APIPG AP P G P L P Y NP AP SG +++
Subjt: GIRPPVLPRPIPGAPGYVPAPTMPPMMGPPGAPM-PGQVNIPSRPPPPAPIPGS-------APQPSSTNGAP-----LAAPSMYQANPTAPGSGGYDS
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