; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G06800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA-binding protein BRN1
Genome locationClcChr09:5321307..5327017
RNA-Seq ExpressionClc09G06800
SyntenyClc09G06800
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR002343 - Paraneoplastic encephalomyelitis antigen
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575869.1 RNA-binding protein BRN1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-22792.43Show/hide
Query:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA
        MAEGS  GERK SSQEEEDSVKLFVGQVPKHMTEAQLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYA
Subjt:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG
        AQSQASNVLNADSQ  SLFGA+PL Y+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP 
Subjt:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
        VPGLQHPMAYPGGMMSPGVVSSS  PGPFTGG NNSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF

Query:  VSYDSAEAAQSAIT--------KLLPLADIGG-PKCMTIIPLSDLRVDW
        VSYDS EAAQSAI+        KLLPLA IGG  K  T+IPLSDLRVDW
Subjt:  VSYDSAEAAQSAIT--------KLLPLADIGG-PKCMTIIPLSDLRVDW

XP_004148884.1 RNA-binding protein BRN1 [Cucumis sativus]9.2e-22294.38Show/hide
Query:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGS+ GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP
        KAQSQA+NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPASY  SAYP
Subjt:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP

Query:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG
        GVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAITKLLPLADIGGPK
        FVSYDSAEAAQSAI+ +     +GG K
Subjt:  FVSYDSAEAAQSAITKLLPLADIGGPK

XP_008451423.1 PREDICTED: RNA-binding protein BRN1 [Cucumis melo]7.0e-22294.38Show/hide
Query:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGS+ GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP
        KAQSQA+NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPASY  SAYP
Subjt:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP

Query:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG
        GVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAITKLLPLADIGGPK
        FVSYDSAEAAQSAI+ ++    +GG K
Subjt:  FVSYDSAEAAQSAITKLLPLADIGGPK

XP_022953846.1 RNA-binding protein BRN1-like [Cucurbita moschata]7.8e-22193.66Show/hide
Query:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA
        MAEGS  GERK SSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYA
Subjt:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG
        AQSQASNVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP 
Subjt:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
        VPGLQHPMAYPGGMMSPGVVSSS  PGPFTGG NNSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF

Query:  VSYDSAEAAQSAITKLLPLADIGGPK
        VSYDS EAAQSAI+++     +GG K
Subjt:  VSYDSAEAAQSAITKLLPLADIGGPK

XP_038900154.1 RNA-binding protein BRN1 [Benincasa hispida]1.1e-22795.29Show/hide
Query:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAEGS+GERKES+QEEEDSVKLFVGQVPK MTEAQLLAMFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
Subjt:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPGV
        QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSG+PNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPA+YV SAYPGV
Subjt:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPGV

Query:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFV
        PGLQHPMAY GGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFV
Subjt:  PGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFV

Query:  SYDSAEAAQSAITKLLPLADIGGPK
        SYDSAEAAQSAI+ ++    +GG K
Subjt:  SYDSAEAAQSAITKLLPLADIGGPK

TrEMBL top hitse value%identityAlignment
A0A0A0K5R5 Uncharacterized protein4.4e-22294.38Show/hide
Query:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGS+ GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP
        KAQSQA+NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPASY  SAYP
Subjt:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP

Query:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG
        GVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAITKLLPLADIGGPK
        FVSYDSAEAAQSAI+ +     +GG K
Subjt:  FVSYDSAEAAQSAITKLLPLADIGGPK

A0A1S3BRF9 RNA-binding protein BRN13.4e-22294.38Show/hide
Query:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
        MAEGS+ GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY
Subjt:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKY

Query:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
        ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ
Subjt:  ADGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQ

Query:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP
        KAQSQA+NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNY MPPASY  SAYP
Subjt:  KAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP

Query:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG
        GVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFG
Subjt:  GVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFG

Query:  FVSYDSAEAAQSAITKLLPLADIGGPK
        FVSYDSAEAAQSAI+ ++    +GG K
Subjt:  FVSYDSAEAAQSAITKLLPLADIGGPK

A0A5A7UR22 RNA-binding protein BRN11.5e-21790.56Show/hide
Query:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRG-----------------CCFVICPSRQEADKAVNAC
        MAEGS+ GERKESS QEEEDSVKLFVGQVPKHMTE QLL MFQEFALVDEVNIIRDK TRASRG                 CCFVICPSRQEADKAVNAC
Subjt:  MAEGSK-GERKESS-QEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRG-----------------CCFVICPSRQEADKAVNAC

Query:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
        HNKKTLPGASSPLQVKYADGELERL EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP
Subjt:  HNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVP

Query:  LVVKWADTEKERQARKAQKAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
        LVVKWADTEKERQARKAQKAQSQA+NVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM
Subjt:  LVVKWADTEKERQARKAQKAQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGM

Query:  ATRNYGMPPASYVGSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRV
        ATRNY MPPASY  SAYPGVP LQHPMAYPGGMMSPGVVSSSPGPGPFTGGK NSPTSS+GKGSGGQIEGPPGANLFIYHIPQEFGD ELANSFRAFGRV
Subjt:  ATRNYGMPPASYVGSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRV

Query:  LSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAITKLLPLADIGGPK
        LSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI+ ++    +GG K
Subjt:  LSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAITKLLPLADIGGPK

A0A6J1GP82 RNA-binding protein BRN1-like3.8e-22193.66Show/hide
Query:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA
        MAEGS  GERK SSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDK TRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYA
Subjt:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG
        AQSQASNVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYP 
Subjt:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
        VPGLQHPMAYPGGMMSPGVVSSS  PGPFTGG NNSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF

Query:  VSYDSAEAAQSAITKLLPLADIGGPK
        VSYDS EAAQSAI+++     +GG K
Subjt:  VSYDSAEAAQSAITKLLPLADIGGPK

A0A6J1JX41 RNA-binding protein BRN1-like1.1e-21792.72Show/hide
Query:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA
        MAEGS  GERK SSQEEEDSVKLFVGQVPKH+TEAQLLAMFQE ALVDEVNIIRDK TRASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYA
Subjt:  MAEGS-KGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYA

Query:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK
        DGELERLEHKLFIGMLPKNVSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSSVPLVVKWADTEKERQARKAQK
Subjt:  DGELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQK

Query:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG
        AQSQASNVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGI PDLGPGMATRNYGMPPASYVGSAYP 
Subjt:  AQSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPG

Query:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
        VP LQHPMAYPGGMMSPGVVSSS  PGPFTGG NNSPTSSLGKGSG QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF
Subjt:  VPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGF

Query:  VSYDSAEAAQSAITKLLPLADIGGPK
        VSYDS EAAQSAI+++     +GG K
Subjt:  VSYDSAEAAQSAITKLLPLADIGGPK

SwissProt top hitse value%identityAlignment
A0JM51 CUGBP Elav-like family member 54.5e-6235.83Show/hide
Query:  RKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH
        ++  S ++ D++KLFVGQ+P+++ E  L  +F++F  + E+ +++D+ T   +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E    + 
Subjt:  RKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEH

Query:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK------------
        KLF+GML K  SE+EV+ +F  +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT+KER  R+            
Subjt:  KLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARK------------

Query:  -------------AQKAQSQASNVLNADS---QHPSL-FGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG
                     AQ    Q + VL+        PS+ F +  +  +   N  G  A         H PP+   +  P ++  L  G       P   P 
Subjt:  -------------AQKAQSQASNVLNADS---QHPSL-FGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPG

Query:  MAT--RNYGMP-----PASYVGSAYPGVPGLQHPMA-YPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELA
        + T   N  +P     PA  V S +P   G+Q   A YP   ++P V  S+P P P                   Q EGP G NLFIYH+PQEFGD EL 
Subjt:  MAT--RNYGMP-----PASYVGSAYPGVPGLQHPMA-YPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELA

Query:  NSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI
          F  FG ++S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI
Subjt:  NSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI

Q08E07 CUGBP Elav-like family member 34.6e-5935.6Show/hide
Query:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM
        +E D++KLFVGQ+P+H+ E  L  +F++F  + E+ +I+DK T   +GC F+   +R  A KA +A H +KTLPG + P+QVK AD E    + KLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA----------
        L K  ++++V  +F  +GTI +  +LRG   TSKGCAF+K++T  +A AA+  ++    + G+S  LVVK+ADTEKER  R+ Q+  +Q           
Subjt:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQA----------

Query:  ---SNVLNADSQHPSLFGAMPLGYVPPYNGYG------YQAPGSYGLMQYHLPPMQNQSGFP-------NMIPQLNQGNAMRGIP--------PD-LGPG
           S    A  Q  +   A    Y+ P             A  + GL+   + P    S  P       + IP     N    +P        PD L P 
Subjt:  ---SNVLNADSQHPSLFGAMPLGYVPPYNGYG------YQAPGSYGLMQYHLPPMQNQSGFP-------NMIPQLNQGNAMRGIP--------PD-LGPG

Query:  MATRNYGMPPASYVGSAYPGVPGLQHPMAYPGGM--------MSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELA
                 PA+ V        G+QH  AYP             P +V+  P P P    +              Q EGP G N+FIYH+PQEF D E+ 
Subjt:  MATRNYGMPPASYVGSAYPGVPGLQHPMAYPGGM--------MSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELA

Query:  NSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI
          F  FG V+SAKVFVD+ +  SKCFGFVS+D+  +AQ+AI
Subjt:  NSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI

Q8GZ26 RNA-binding protein BRN21.1e-13261.65Show/hide
Query:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL
        E + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++K TRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKL
Subjt:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL

Query:  FIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNA
        F+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS  S +   
Subjt:  FIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNA

Query:  DSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPGVPGL
        D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y      G  GL
Subjt:  DSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPGVPGL

Query:  QHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYD
        Q+PMA+P GM+ P +  ++  PG    G   S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYD
Subjt:  QHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYD

Query:  SAEAAQSAITKL
        S  AAQ+AI  +
Subjt:  SAEAAQSAITKL

Q8LFS6 RNA-binding protein BRN11.0e-15166.9Show/hide
Query:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAE  +  R+++  EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYAD
Subjt:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSA
        QS  + + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS 
Subjt:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSA

Query:  YPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKC
        YP + G   P AYP G++SP  +SSSPG    +     S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VLSAKVFVDK +GVSKC
Subjt:  YPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKC

Query:  FGFVSYDSAEAAQSAITKLLPLADIGGPK
        FGFVSYDS  AAQ+AI  ++    +GG K
Subjt:  FGFVSYDSAEAAQSAITKLLPLADIGGPK

Q9IBD1 CUGBP Elav-like family member 37.9e-5936.19Show/hide
Query:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM
        +E D++KLF+GQ+P+++ E  L  +F++F  + E+ +I+DK T   +GC F+   +R+ A KA NA H +KTLPG + P+QVK AD E  R + KLF+GM
Subjt:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGM

Query:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADSQH
        L K +S+ +V  +F  +G+I++  +LRG    SKGCAF+KY++  +A AA+ A++G   + G+S  LVVK+ADTEKER  R+ Q+  SQ   V++  S H
Subjt:  LPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADSQH

Query:  PSLFGAMPLGYVP-----PYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPGVPGLQHPMAY
           + A     V        + Y         +    L  +   S     I  +   +     PP +    AT    +PP   V S YP VP   +  + 
Subjt:  PSLFGAMPLGYVP-----PYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPGVPGLQHPMAY

Query:  PGGMMSPGV---VSSSPGPGP----FTGGKNNSPTSSLGKGSGG---------------------QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVL
           + + GV    + SP   P    +TG ++ + T     G  G                     Q EGP G N+FIYH+PQEF D E+   F  FG V+
Subjt:  PGGMMSPGV---VSSSPGPGP----FTGGKNNSPTSSLGKGSGG---------------------QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVL

Query:  SAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI
        SAKVFVD+ +  SKCFGFVS+D+  +AQ+AI
Subjt:  SAKVFVDKTSGVSKCFGFVSYDSAEAAQSAI

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.7e-13461.65Show/hide
Query:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL
        E + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++K TRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERLEHKL
Subjt:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL

Query:  FIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNA
        F+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K QS  S +   
Subjt:  FIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNA

Query:  DSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPGVPGL
        D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y      G  GL
Subjt:  DSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVGSAYPGVPGL

Query:  QHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYD
        Q+PMA+P GM+ P +  ++  PG    G   S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYD
Subjt:  QHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYD

Query:  SAEAAQSAITKL
        S  AAQ+AI  +
Subjt:  SAEAAQSAITKL

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-13160.33Show/hide
Query:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----
        E + E E+ VKLFVGQVPKHMTE QLL +F+EF++V+EVNII++K TRA RGCCF+ CP+R++ADK +N+ HNKKTLPGASSPLQVKYADGELERL    
Subjt:  ESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERL----

Query:  -----EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQ
             EHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+  MEG++VPL+VKWADTEKERQAR+  K Q
Subjt:  -----EHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQ

Query:  SQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVG
        S  S +   D Q+PS+FGA+P+ YVPPYNGYGY  PG+YG   Y LPP+Q Q  F N+I P    G A++G      +PP L P    RN+     +Y  
Subjt:  SQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMI-PQLNQGNAMRG------IPPDLGPGMATRNYGMPPASYVG

Query:  SAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVS
            G  GLQ+PMA+P GM+ P +  ++  PG    G   S  SSL      Q EGP GANLFIY+IP+EF D ELA +F+ FG+VLSAKVFVDK +G+S
Subjt:  SAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVS

Query:  KCFGFVSYDSAEAAQSAITKL
        KCFGF+SYDS  AAQ+AI  +
Subjt:  KCFGFVSYDSAEAAQSAITKL

AT4G03110.1 RNA-binding protein-defense related 17.4e-15366.9Show/hide
Query:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAE  +  R+++  EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYAD
Subjt:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSA
        QS  + + N D  +PSLFGA+P+GYVPPYNGYGY Q PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS 
Subjt:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGY-QAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSA

Query:  YPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKC
        YP + G   P AYP G++SP  +SSSPG    +     S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VLSAKVFVDK +GVSKC
Subjt:  YPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKC

Query:  FGFVSYDSAEAAQSAITKLLPLADIGGPK
        FGFVSYDS  AAQ+AI  ++    +GG K
Subjt:  FGFVSYDSAEAAQSAITKLLPLADIGGPK

AT4G03110.2 RNA-binding protein-defense related 15.0e-14967.49Show/hide
Query:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD
        MAE  +  R+++  EEE+SVKLFVGQ+PKHM+E+QLL +FQEFA+VDEVNII+DK TRASRGCCF++CPSR+EADK VNACHNKKTLPGA+S LQVKYAD
Subjt:  MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYAD

Query:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA
        GELERLEHKLF+GMLPKNVSE EV  LFS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGK KMEGS+VPLVVKWADTE+ER  R+ QKA
Subjt:  GELERLEHKLFIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKA

Query:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAY
        QS  + + N D  +PSLFGA+P+GYVPPYNGYGY  PG+YG   Y LPP+QNQ+ F NMI Q NQG  NA++G  PD + P +A RN+ MPP +Y+GS Y
Subjt:  QSQASNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQG--NAMRGIPPD-LGPGMATRNYGMPPASYVGSAY

Query:  PGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF
        P + G   P AYP G++SP  +SSSPG    +     S    +G  S  Q EGP GANLFIY+IP+EFGD ELA +F++FG VLSAKVFVDK +GVSKCF
Subjt:  PGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTGGKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCF

Query:  GFVSYD
        G +S+D
Subjt:  GFVSYD

AT4G16280.2 RNA binding;abscisic acid binding4.2e-3934.85Show/hide
Query:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLF
        +   +VKLFVG VP+  TE ++   F++   V EV +I+DK T   +GCCFV   + ++AD+A+ A HN+ TLPG + P+QV+YADGE ER   LE KLF
Subjt:  EEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELER---LEHKLF

Query:  IGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNAD
        +G L K  +E EV  +F Q+G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG   M G + PL+V++A+ ++ +     + A           
Subjt:  IGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNAD

Query:  SQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYGMPPASYVGSAYPGVPGLQ
                 + LG  P +   G +   ++G       H  P +  +   N+ P  N G  +RG   D    PG AT   N G P   Y      GVP L 
Subjt:  SQHPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQ---YHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLG--PGMAT--RNYGMPPASYVGSAYPGVPGLQ

Query:  HPMAYPG
        +P+  PG
Subjt:  HPMAYPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGGGAGTAAAGGAGAGAGAAAGGAGAGTAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTGCCAAAGCATATGACCGAAGCTCAACTTCT
CGCAATGTTCCAAGAGTTTGCACTTGTAGACGAAGTCAACATCATCAGAGACAAGGCCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATTTGTCCTTCAAGGCAGGAGG
CGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTC
TTTATTGGAATGCTTCCGAAAAATGTGTCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAATATGGAACAATAAAAGACTTGCAAATATTAAGAGGTTCACAGCAGACAAG
CAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACGGAAAGTGTAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTA
AATGGGCTGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCTCTAATGTGCTTAATGCAGACTCCCAACATCCTTCACTGTTTGGAGCC
ATGCCACTGGGTTATGTTCCACCATATAATGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATCACCTACCTCCAATGCAGAATCAATCTGGTTTCCC
CAATATGATACCTCAATTAAATCAAGGAAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCGGGTATGGCCACTAGAAATTATGGCATGCCTCCTGCAAGTTACGTTG
GCTCTGCCTATCCTGGAGTTCCAGGTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCTGGGGTTGTGAGCAGTTCACCTGGTCCAGGGCCATTTACTGGT
GGGAAGAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCTCAAGAATTTGGGGA
TTTGGAGCTTGCTAATTCTTTTCGAGCATTTGGACGAGTTTTGAGCGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGGTTTGTTAGTTATGATT
CCGCTGAGGCTGCTCAATCTGCCATAACAAAGTTGCTACCGCTTGCTGACATTGGGGGGCCTAAATGCATGACAATCATTCCATTATCAGATCTTAGGGTGGATTGGGGA
CGGTCTATGCCTTCAAATGAAGAATGCTGGATATTTGTCCAGGCAACTCATCAGCTGCAGCAGCATCATAGAGGTATTTCGGATAATCGGTTTTGGAGTTTGATTCCTCC
AAGAAGTATTCTATTTGTTCAGAAATCACATTTCATGACTATTGTTGTTCTAAGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
GAGATCCAATTTTTTGCCATCAAAGAATCCTTCAGTTTTTTCCCAGCGAAGACTCTCCGAAGAAAAATCCAATCTCAGAGAGAGAAGTGACGGCGAAAACTAGAGAGAGT
TTTTTTAGAGAGAGAAAGCTTGAAACCGGCATTAATGGCGGAGGGGAGTAAAGGAGAGAGAAAGGAGAGTAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGTC
AAGTGCCAAAGCATATGACCGAAGCTCAACTTCTCGCAATGTTCCAAGAGTTTGCACTTGTAGACGAAGTCAACATCATCAGAGACAAGGCCACTCGCGCCTCTAGAGGT
TGCTGTTTTGTGATTTGTCCTTCAAGGCAGGAGGCGGATAAGGCGGTCAATGCTTGCCATAACAAGAAAACTTTGCCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGC
AGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCGAAAAATGTGTCCGAAGATGAAGTTTCTGGTCTTTTCTCTCAATATGGAACAATAAAAG
ACTTGCAAATATTAAGAGGTTCACAGCAGACAAGCAAAGGTTGTGCATTCTTGAAGTATGAGACGAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAACGGAAAGTGT
AAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCTGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCTCTAATGTGCTTAA
TGCAGACTCCCAACATCCTTCACTGTTTGGAGCCATGCCACTGGGTTATGTTCCACCATATAATGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAATATC
ACCTACCTCCAATGCAGAATCAATCTGGTTTCCCCAATATGATACCTCAATTAAATCAAGGAAATGCAATGCGTGGGATCCCACCTGACCTTGGCCCGGGTATGGCCACT
AGAAATTATGGCATGCCTCCTGCAAGTTACGTTGGCTCTGCCTATCCTGGAGTTCCAGGTCTTCAGCATCCCATGGCGTACCCTGGAGGAATGATGAGTCCTGGGGTTGT
GAGCAGTTCACCTGGTCCAGGGCCATTTACTGGTGGGAAGAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGAGGTCAGATTGAAGGTCCACCTGGTGCTAATC
TTTTTATTTATCACATACCTCAAGAATTTGGGGATTTGGAGCTTGCTAATTCTTTTCGAGCATTTGGACGAGTTTTGAGCGCTAAAGTATTTGTTGACAAAACATCTGGA
GTTAGCAAATGTTTTGGGTTTGTTAGTTATGATTCCGCTGAGGCTGCTCAATCTGCCATAACAAAGTTGCTACCGCTTGCTGACATTGGGGGGCCTAAATGCATGACAAT
CATTCCATTATCAGATCTTAGGGTGGATTGGGGACGGTCTATGCCTTCAAATGAAGAATGCTGGATATTTGTCCAGGCAACTCATCAGCTGCAGCAGCATCATAGAGGTA
TTTCGGATAATCGGTTTTGGAGTTTGATTCCTCCAAGAAGTATTCTATTTGTTCAGAAATCACATTTCATGACTATTGTTGTTCTAAGTTCTTAG
Protein sequenceShow/hide protein sequence
MAEGSKGERKESSQEEEDSVKLFVGQVPKHMTEAQLLAMFQEFALVDEVNIIRDKATRASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKL
FIGMLPKNVSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADSQHPSLFGA
MPLGYVPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYGMPPASYVGSAYPGVPGLQHPMAYPGGMMSPGVVSSSPGPGPFTG
GKNNSPTSSLGKGSGGQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAITKLLPLADIGGPKCMTIIPLSDLRVDWG
RSMPSNEECWIFVQATHQLQQHHRGISDNRFWSLIPPRSILFVQKSHFMTIVVLSS