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Clc09G06840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglutamic acid-rich protein
Genome locationClcChr09:5396896..5397541
RNA-Seq ExpressionClc09G06840
SyntenyClc09G06840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057545.1 glutamic acid-rich protein [Cucumis melo var. makuwa]3.7e-4370.78Show/hide
Query:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND
        MLST PLFFNFYPHHF H QGNHIEDISSYFLFEATGDSE DSSVD     SA++TEFNDAESCTDDTPT +C NE         +++++ + EEMVEND
Subjt:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND

Query:  DD-------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS
        DD        EVVESK IGF+ KSNASIDSTK +FKMLNEVDKNRLFWE CLAS
Subjt:  DD-------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS

XP_008451422.1 PREDICTED: glutamic acid-rich protein [Cucumis melo]2.9e-4370.51Show/hide
Query:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND
        MLST PLFFNFYPHHF H QGNHIEDISSYFLFEATGDSE DSSVD     SA++TEFNDAESCTDDTPT +C NE       E +++++ + EEMVEND
Subjt:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND

Query:  DD---------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS
        DD          EVVESK IGF+ KSNASIDSTK +FKMLNEVDKNRLFWE CLAS
Subjt:  DD---------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS

XP_011659319.1 nuclear polyadenylated RNA-binding protein 3 [Cucumis sativus]1.7e-4068.87Show/hide
Query:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDD--
        MLS+PLFFNFYPHHF H QGNHIEDISSYFLFEATGDSEVD       S  STEFNDAESCTDDT  I +            E++E+EEE  VENDDD  
Subjt:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDD--

Query:  ------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS
               EVVESK IGF+ KSNASIDSTK EFKMLNEVDKNRLFWE CLAS
Subjt:  ------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS

XP_022991734.1 uncharacterized protein LOC111488264 [Cucurbita maxima]8.9e-3765.49Show/hide
Query:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDDHE
        MLSTP FFNF+PH F    GNHIED SS+ LFEATGDSE DS V  G S  S EFNDAESCTDDTP +C NEF    +YE ++++++++E   END++  
Subjt:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDDHE

Query:  VVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS
         VESKPIGF T+S+ASIDS +EFKMLNEVDKNRLFWE CLAS
Subjt:  VVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS

XP_038896353.1 uncharacterized protein LOC120084618 [Benincasa hispida]5.0e-5686.62Show/hide
Query:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDDHE
        MLSTPLFFNFYPH FAHKQGNHIEDISSYFL EATGDSE+DSSVD GGS ASTEFNDAESCTDDTPTIC NEF   G YEY   E+E+EEEMVEND D E
Subjt:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDDHE

Query:  VVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS
        VVESK IGFTTKSNASIDSTKEFKMLNEVDKNRLFWE CLAS
Subjt:  VVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS

TrEMBL top hitse value%identityAlignment
A0A0A0K519 Uncharacterized protein8.4e-4168.87Show/hide
Query:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDD--
        MLS+PLFFNFYPHHF H QGNHIEDISSYFLFEATGDSEVD       S  STEFNDAESCTDDT  I +            E++E+EEE  VENDDD  
Subjt:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDD--

Query:  ------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS
               EVVESK IGF+ KSNASIDSTK EFKMLNEVDKNRLFWE CLAS
Subjt:  ------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS

A0A1S3BRI2 glutamic acid-rich protein1.4e-4370.51Show/hide
Query:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND
        MLST PLFFNFYPHHF H QGNHIEDISSYFLFEATGDSE DSSVD     SA++TEFNDAESCTDDTPT +C NE       E +++++ + EEMVEND
Subjt:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND

Query:  DD---------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS
        DD          EVVESK IGF+ KSNASIDSTK +FKMLNEVDKNRLFWE CLAS
Subjt:  DD---------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS

A0A5A7UVG0 Glutamic acid-rich protein1.8e-4370.78Show/hide
Query:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND
        MLST PLFFNFYPHHF H QGNHIEDISSYFLFEATGDSE DSSVD     SA++TEFNDAESCTDDTPT +C NE         +++++ + EEMVEND
Subjt:  MLST-PLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVD--PGGSAASTEFNDAESCTDDTPT-ICINEFGIYGSYEYEEEEEEEEEEMVEND

Query:  DD-------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS
        DD        EVVESK IGF+ KSNASIDSTK +FKMLNEVDKNRLFWE CLAS
Subjt:  DD-------HEVVESKPIGFTTKSNASIDSTK-EFKMLNEVDKNRLFWEACLAS

A0A6J1DA36 uncharacterized protein LOC1110184291.9e-3266.44Show/hide
Query:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVD-SSVDPGGSAA---STEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVEND
        M  TPLFFN + HHFA K G  ++D SSY LFEATGDSE D SSVDPGGS+A   S E NDAESCTDDTP    +EF +    E E+ E+ EE E  E +
Subjt:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVD-SSVDPGGSAA---STEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVEND

Query:  DDHEVVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS
        DD EVVESK     TKS+ASIDSTKEFKMLNEVDKNRLFWEACLAS
Subjt:  DDHEVVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS

A0A6J1JVN0 uncharacterized protein LOC1114882644.3e-3765.49Show/hide
Query:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDDHE
        MLSTP FFNF+PH F    GNHIED SS+ LFEATGDSE DS V  G S  S EFNDAESCTDDTP +C NEF    +YE ++++++++E   END++  
Subjt:  MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDDHE

Query:  VVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS
         VESKPIGF T+S+ASIDS +EFKMLNEVDKNRLFWE CLAS
Subjt:  VVESKPIGFTTKSNASIDSTKEFKMLNEVDKNRLFWEACLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47950.1 unknown protein1.9e-0528.35Show/hide
Query:  NHIEDISSYFLFEATGDSEV-DSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEE----EEEEEEEMVENDDDHEVVESKPIGFTTKSNA
        N++ D+S + L EA+ DSE    SVD        +     S      T C+++      ++ +++    EE +  +  + D + EV      G + + N 
Subjt:  NHIEDISSYFLFEATGDSEV-DSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEE----EEEEEEEMVENDDDHEVVESKPIGFTTKSNA

Query:  SIDSTKEFKMLNEVDKNRLFWEACLAS
        ++DS     +++E+D+NR+FWEACLAS
Subjt:  SIDSTKEFKMLNEVDKNRLFWEACLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAACTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGCTCATAAGCAAGGCAACCACATTGAGGATATTTCCTCTTACTTTCTCTTCGAGGCGACCGGCGA
CTCGGAGGTTGACTCCTCGGTCGACCCCGGGGGCTCGGCCGCCTCGACGGAGTTCAACGATGCTGAATCTTGCACCGATGACACTCCTACTATATGTATTAATGAATTTG
GGATATATGGAAGTTATGAATATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGGTTGAGAATGATGATGATCATGAAGTAGTTGAAAGCAAGCCAATTGGATTCACA
ACAAAGTCAAATGCTTCTATTGATTCAACTAAGGAGTTCAAAATGTTGAATGAGGTGGACAAAAACAGGTTGTTTTGGGAGGCTTGTTTGGCTTCATAG
mRNA sequenceShow/hide mRNA sequence
TTAGTCTTTGCTTTATATATAACCCCTCCCCACCCCACACCCTCCATTTGTTAATATTCTACTAAACAAAATCTTTGCTCCTCTTCTTCCTTTCTTATTTTTCCAATTTT
ATATTATGCTCTCAACTCCTCTCTTCTTCAACTTCTATCCTCACCATTTTGCTCATAAGCAAGGCAACCACATTGAGGATATTTCCTCTTACTTTCTCTTCGAGGCGACC
GGCGACTCGGAGGTTGACTCCTCGGTCGACCCCGGGGGCTCGGCCGCCTCGACGGAGTTCAACGATGCTGAATCTTGCACCGATGACACTCCTACTATATGTATTAATGA
ATTTGGGATATATGGAAGTTATGAATATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGGTTGAGAATGATGATGATCATGAAGTAGTTGAAAGCAAGCCAATTGGAT
TCACAACAAAGTCAAATGCTTCTATTGATTCAACTAAGGAGTTCAAAATGTTGAATGAGGTGGACAAAAACAGGTTGTTTTGGGAGGCTTGTTTGGCTTCATAGCTACCA
TAATCCTTTTTTTTCTTTTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTTTTATGTGGCCATTTTTCCAACCTCACTTCTGAAATATTGAAAGGTTT
Protein sequenceShow/hide protein sequence
MLSTPLFFNFYPHHFAHKQGNHIEDISSYFLFEATGDSEVDSSVDPGGSAASTEFNDAESCTDDTPTICINEFGIYGSYEYEEEEEEEEEEMVENDDDHEVVESKPIGFT
TKSNASIDSTKEFKMLNEVDKNRLFWEACLAS