; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G06880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G06880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHistone H2A
Genome locationClcChr09:5417273..5419233
RNA-Seq ExpressionClc09G06880
SyntenyClc09G06880
Gene Ontology termsGO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR002119 - Histone H2A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold
IPR032454 - Histone H2A, C-terminal domain
IPR032458 - Histone H2A conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY40811.1 hypothetical protein CUMW_054740 [Citrus unshiu]1.8e-11979.21Show/hide
Query:  MSSTDIPAKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELS
        MSS     KGGRGR   TK VSRS KAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAV+NDEE S
Subjt:  MSSTDIPAKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELS

Query:  KLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIA
        KLLGSVTIA+GGV+P IHQ+LLPKKA   K         +I  +       S   R  A   + MSS+ STKGGRGKPK+TKS+SRS KAGLQFPVGRIA
Subjt:  KLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIA

Query:  RFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSAS
        RFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLP+K G G+ DIGSAS
Subjt:  RFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSAS

Query:  QEF
        QEF
Subjt:  QEF

KAF4357682.1 hypothetical protein F8388_007218 [Cannabis sativa]5.2e-11975.86Show/hide
Query:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI
        KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTI
Subjt:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI

Query:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLG------------------------FRPSAGKDRRMSSSASTKGGRGKPKATKSV
        A+GGV+P IHQ+LLPKK G  KD     ++ D+VE   L   HSL                         F P + K  +MS++A+TKGGRGKPK++KSV
Subjt:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLG------------------------FRPSAGKDRRMSSSASTKGGRGKPKATKSV

Query:  SRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNL
        SRS KAGLQFPVGRIARFLK GKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ L
Subjt:  SRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNL

Query:  LPKKAGSGKGDIGSASQEF
        LPKK G GKG+ GSASQEF
Subjt:  LPKKAGSGKGDIGSASQEF

KAF4368296.1 hypothetical protein G4B88_008600 [Cannabis sativa]5.2e-11980.68Show/hide
Query:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI
        KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTI
Subjt:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI

Query:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKY
        A+GGV+P IHQ+LLPKK G  KD           EI +      L F P + K  +MS++A+TKGGRGKPK++KSVSRS KAGLQFPVGRIARFLK GKY
Subjt:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKY

Query:  AERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        AERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLPKK G GKG+ GSASQEF
Subjt:  AERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

KAG6751671.1 hypothetical protein POTOM_043868 [Populus tomentosa]7.6e-11878.26Show/hide
Query:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI
        +GGRG+   +K+VSRS+KAGLQFPVGRIAR+LK G+YA+R+G+GSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEEL KLLGSVTI
Subjt:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI

Query:  ASGGVMPKIHQSLLPKKAGNAKDNQ----SRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLK
        A+GGV+P I+Q+LLPKKAG  K       S  T   +  ++   +  S  F+ S+         ASTKGGRGKPKA+KSVSRSQKAGLQFPVGRIARFLK
Subjt:  ASGGVMPKIHQSLLPKKAGNAKDNQ----SRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLK

Query:  AGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        AGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLPKK G GKGDIGSASQEF
Subjt:  AGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

KDP21535.1 hypothetical protein JCGZ_22006 [Jatropha curcas]3.4e-11878.64Show/hide
Query:  MSSTDIP------AKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVR
        MSST +P      A+GGRG  +  KSVSRS KAGLQFPVGR+AR+LK+GRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVR
Subjt:  MSSTDIP------AKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVR

Query:  NDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQF
        NDEELSKLLGSVTIA+GGV+P IHQ+LLPKK    K                      LG      +   MSS  STKGGRGKPK++KSVSRSQKAGLQF
Subjt:  NDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQF

Query:  PVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKG
        PVGRIARFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLPKK G GKG
Subjt:  PVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKG

Query:  DIGSASQEF
        DIGSASQEF
Subjt:  DIGSASQEF

TrEMBL top hitse value%identityAlignment
A0A067JNE6 Histone H2A1.6e-11878.64Show/hide
Query:  MSSTDIP------AKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVR
        MSST +P      A+GGRG  +  KSVSRS KAGLQFPVGR+AR+LK+GRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVR
Subjt:  MSSTDIP------AKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVR

Query:  NDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQF
        NDEELSKLLGSVTIA+GGV+P IHQ+LLPKK    K                      LG      +   MSS  STKGGRGKPK++KSVSRSQKAGLQF
Subjt:  NDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQF

Query:  PVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKG
        PVGRIARFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLPKK G GKG
Subjt:  PVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKG

Query:  DIGSASQEF
        DIGSASQEF
Subjt:  DIGSASQEF

A0A1E5WIF6 Histone H2A3.9e-9668.28Show/hide
Query:  GRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG
        G  A  K+ SRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AVLEYLAAEVLELAGNAARDNKK RI+PRHIQLAVRNDEEL+KLLG  TIASGG
Subjt:  GRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG

Query:  VMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERV
        VMP IHQ LLPKKA ++K +                          AG+ + + S A          A K++SRS KAGLQFPVGRIARFLKAGKYAERV
Subjt:  VMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERV

Query:  GAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQE
        GAGAPVYL+AVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELS+LLG VTIA+GGV+PNIH  LLPKKAG G     +  ++
Subjt:  GAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQE

A0A2H5NLL6 Histone H2A8.7e-12079.21Show/hide
Query:  MSSTDIPAKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELS
        MSS     KGGRGR   TK VSRS KAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAV+NDEE S
Subjt:  MSSTDIPAKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELS

Query:  KLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIA
        KLLGSVTIA+GGV+P IHQ+LLPKKA   K         +I  +       S   R  A   + MSS+ STKGGRGKPK+TKS+SRS KAGLQFPVGRIA
Subjt:  KLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIA

Query:  RFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSAS
        RFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLP+K G G+ DIGSAS
Subjt:  RFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSAS

Query:  QEF
        QEF
Subjt:  QEF

A0A7J6EH34 Uncharacterized protein2.5e-11975.86Show/hide
Query:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI
        KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTI
Subjt:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI

Query:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLG------------------------FRPSAGKDRRMSSSASTKGGRGKPKATKSV
        A+GGV+P IHQ+LLPKK G  KD     ++ D+VE   L   HSL                         F P + K  +MS++A+TKGGRGKPK++KSV
Subjt:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLG------------------------FRPSAGKDRRMSSSASTKGGRGKPKATKSV

Query:  SRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNL
        SRS KAGLQFPVGRIARFLK GKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ L
Subjt:  SRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNL

Query:  LPKKAGSGKGDIGSASQEF
        LPKK G GKG+ GSASQEF
Subjt:  LPKKAGSGKGDIGSASQEF

A0A7J6FC78 Uncharacterized protein2.5e-11980.68Show/hide
Query:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI
        KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTI
Subjt:  KGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTI

Query:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKY
        A+GGV+P IHQ+LLPKK G  KD           EI +      L F P + K  +MS++A+TKGGRGKPK++KSVSRS KAGLQFPVGRIARFLK GKY
Subjt:  ASGGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKY

Query:  AERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        AERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLPKK G GKG+ GSASQEF
Subjt:  AERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

SwissProt top hitse value%identityAlignment
A2ZL69 Probable histone H2AXb3.1e-5888.32Show/hide
Query:  SSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLL
        SSA   GGRGK K +KSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELS+LL
Subjt:  SSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLL

Query:  GDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        G VTIA GGVLPNIHQ LLPKK G  K DIGSASQEF
Subjt:  GDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

O04848 Probable histone H2AXa6.1e-6290.58Show/hide
Query:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL
        + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKL
Subjt:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL

Query:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        LG VTIANGGVLPNIHQ LLP K G  KGDIGSASQEF
Subjt:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

O65759 Histone H2AX2.2e-6492.81Show/hide
Query:  MSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSK
        MSS+A+TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNK NRIVPRHIQLAVRNDEELSK
Subjt:  MSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSK

Query:  LLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        LLG VTIANGGVLPNIHQ LLPKK G GKG+IGSASQEF
Subjt:  LLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

P35063 Histone H2AX2.3e-6191.24Show/hide
Query:  SSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLL
        SS+  KGGRGK K+TKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLL
Subjt:  SSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLL

Query:  GDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        G VTIANGGVLPNIHQ LLPKK+G  KG+IGSASQEF
Subjt:  GDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

Q9S9K7 Probable histone H2AXb2.7e-6291.3Show/hide
Query:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL
        + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKL
Subjt:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL

Query:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        LG VTIANGGVLPNIHQ LLP K G  KGDIGSASQEF
Subjt:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

Arabidopsis top hitse value%identityAlignment
AT1G08880.1 Histone superfamily protein4.3e-6390.58Show/hide
Query:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL
        + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKL
Subjt:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL

Query:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        LG VTIANGGVLPNIHQ LLP K G  KGDIGSASQEF
Subjt:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

AT1G54690.1 gamma histone variant H2AX1.9e-6391.3Show/hide
Query:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL
        + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKL
Subjt:  SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKL

Query:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF
        LG VTIANGGVLPNIHQ LLP K G  KGDIGSASQEF
Subjt:  LGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

AT4G27230.1 histone H2A 25.9e-5287.9Show/hide
Query:  GRGKP----KATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDV
        GRGK      A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGDV
Subjt:  GRGKP----KATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDV

Query:  TIANGGVLPNIHQNLLPKKAGSGK
        TIANGGV+PNIH  LLPKKAGS K
Subjt:  TIANGGVLPNIHQNLLPKKAGSGK

AT4G27230.2 histone H2A 25.9e-5287.9Show/hide
Query:  GRGKP----KATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDV
        GRGK      A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGDV
Subjt:  GRGKP----KATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDV

Query:  TIANGGVLPNIHQNLLPKKAGSGK
        TIANGGV+PNIH  LLPKKAGS K
Subjt:  TIANGGVLPNIHQNLLPKKAGSGK

AT5G54640.1 Histone superfamily protein5.0e-5183.72Show/hide
Query:  MSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSK
        M+    T G  G  KAT   SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSK
Subjt:  MSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSK

Query:  LLGDVTIANGGVLPNIHQNLLPKKAGSGK
        LLGDVTIANGGV+PNIH  LLPKKAG+ K
Subjt:  LLGDVTIANGGVLPNIHQNLLPKKAGSGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCACCGACATTCCGGCGAAGGGCGGTAGAGGCAGGAAAGCGACCACCAAGTCCGTTTCCAGGTCTCGCAAGGCCGGTCTCCAATTCCCCGTCGGCCGTATCGC
CAGGTATCTCAAGAAAGGCCGTTATGCACAGCGCGTCGGCTCAGGCTCCCCGGTCTACCTTTCCGCCGTCCTCGAATATCTTGCTGCTGAGGTTTTGGAGTTAGCGGGCA
ATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGGCATATTCAGCTTGCGGTGAGGAACGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGC
GGAGGAGTAATGCCGAAAATCCACCAGTCTCTTTTGCCGAAGAAGGCCGGGAATGCGAAAGACAACCAATCGAGAATTACGAGATGTGACATCGTTGAAATTCGAAATCT
TCAAATTACACATTCTCTAGGGTTTCGACCATCCGCCGGAAAAGATCGTAGAATGAGTTCATCGGCTTCTACCAAGGGCGGCAGAGGGAAACCGAAAGCCACGAAGTCTG
TTTCTCGGTCTCAGAAGGCTGGTCTTCAGTTCCCCGTCGGTCGTATTGCACGATTTCTTAAAGCCGGTAAGTATGCGGAGCGTGTCGGTGCTGGTGCTCCCGTCTACCTC
TCCGCCGTCCTCGAATATCTGGCCGCCGAGGTGCTTGAGCTTGCAGGCAATGCTGCCAGAGACAACAAGAAGAATCGCATTGTTCCAAGACACATACAGCTTGCTGTCCG
CAATGACGAAGAGCTAAGCAAGCTTTTGGGTGATGTGACCATTGCAAATGGTGGTGTGTTACCAAATATCCATCAAAATCTCTTGCCTAAGAAGGCAGGATCAGGCAAAG
GCGACATTGGATCTGCATCACAAGAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCACCGACATTCCGGCGAAGGGCGGTAGAGGCAGGAAAGCGACCACCAAGTCCGTTTCCAGGTCTCGCAAGGCCGGTCTCCAATTCCCCGTCGGCCGTATCGC
CAGGTATCTCAAGAAAGGCCGTTATGCACAGCGCGTCGGCTCAGGCTCCCCGGTCTACCTTTCCGCCGTCCTCGAATATCTTGCTGCTGAGGTTTTGGAGTTAGCGGGCA
ATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGGCATATTCAGCTTGCGGTGAGGAACGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGC
GGAGGAGTAATGCCGAAAATCCACCAGTCTCTTTTGCCGAAGAAGGCCGGGAATGCGAAAGACAACCAATCGAGAATTACGAGATGTGACATCGTTGAAATTCGAAATCT
TCAAATTACACATTCTCTAGGGTTTCGACCATCCGCCGGAAAAGATCGTAGAATGAGTTCATCGGCTTCTACCAAGGGCGGCAGAGGGAAACCGAAAGCCACGAAGTCTG
TTTCTCGGTCTCAGAAGGCTGGTCTTCAGTTCCCCGTCGGTCGTATTGCACGATTTCTTAAAGCCGGTAAGTATGCGGAGCGTGTCGGTGCTGGTGCTCCCGTCTACCTC
TCCGCCGTCCTCGAATATCTGGCCGCCGAGGTGCTTGAGCTTGCAGGCAATGCTGCCAGAGACAACAAGAAGAATCGCATTGTTCCAAGACACATACAGCTTGCTGTCCG
CAATGACGAAGAGCTAAGCAAGCTTTTGGGTGATGTGACCATTGCAAATGGTGGTGTGTTACCAAATATCCATCAAAATCTCTTGCCTAAGAAGGCAGGATCAGGCAAAG
GCGACATTGGATCTGCATCACAAGAGTTCTAA
Protein sequenceShow/hide protein sequence
MSSTDIPAKGGRGRKATTKSVSRSRKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIAS
GGVMPKIHQSLLPKKAGNAKDNQSRITRCDIVEIRNLQITHSLGFRPSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL
SAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF