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Clc09G07390 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G07390
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMethylthioribose-1-phosphate isomerase
Genome locationClcChr09:5939219..5942703
RNA-Seq ExpressionClc09G07390
SyntenyClc09G07390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
B9HCR2 Methylthioribose-1-phosphate isomerase4.1e-0541.25Show/hide
Query:  SIHHRISPLILFYYTPPRT--------------EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK
        ++HH I     FY   P T              E ++PK  L +RGG+ EQVAASG SV   P F VTP  L+ G+IT+K
Subjt:  SIHHRISPLILFYYTPPRT--------------EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK

B9RR88 Methylthioribose-1-phosphate isomerase1.8e-0542.5Show/hide
Query:  SIHHRISPLILFYYTPPRT--------------EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK
        ++HH I     FY   P T              E ++PK  L SRGG+ EQVAASG SV   P F VTP  L+ G+IT+K
Subjt:  SIHHRISPLILFYYTPPRT--------------EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK

D7TCD0 Methylthioribose-1-phosphate isomerase1.2e-0455.32Show/hide
Query:  EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK
        E ++PK  L SRGG+ EQVAASG  V   P F VTP  L+ G+IT+K
Subjt:  EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK

Q948X8 Methylthioribose-1-phosphate isomerase3.1e-0541.98Show/hide
Query:  SSIHHRISPLILFYYTPPRT--------------EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK
        S++HH I     FY   P T              E ++PK  L +RGG+ EQVAASG SV   P F VTP  L+ G+IT+K
Subjt:  SSIHHRISPLILFYYTPPRT--------------EAKTPKVFLKSRGGIVEQVAASGFSVLELPVFYVTPHYLVFGVITKK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAAAATGCCGTCTCTCGGCCGTCGCGCGTCGAAGCCGTCTTGAAGCAGCAAGTCGCGCGTCGAAGCCATTCGTGCAGCAGCGGTCCGTCGTCAGTCGGTCCGT
CGTGCGTCAGTCCAGTTGTCCGTCGGCGTCAGTTCACCCATCCGTACATTGGTCCGCCATATTATTTTTTCGTCTTCATTCTACGATAAAATACCACTTTTCAAGCATTC
ATCATCGTATTTCACCACTCATTCTATTCTATTATACTCCTCCTCGCACTGAGGCAAAGACTCCCAAAGTGTTTTTGAAATCCCGTGGAGGTATTGTGGAGCAAGTAGCC
GCATCTGGTTTCTCTGTTTTGGAACTACCTGTTTTTTATGTCACTCCCCATTATTTGGTTTTTGGAGTCATAACGAAGAAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAAAAATGCCGTCTCTCGGCCGTCGCGCGTCGAAGCCGTCTTGAAGCAGCAAGTCGCGCGTCGAAGCCATTCGTGCAGCAGCGGTCCGTCGTCAGTCGGTCCGT
CGTGCGTCAGTCCAGTTGTCCGTCGGCGTCAGTTCACCCATCCGTACATTGGTCCGCCATATTATTTTTTCGTCTTCATTCTACGATAAAATACCACTTTTCAAGCATTC
ATCATCGTATTTCACCACTCATTCTATTCTATTATACTCCTCCTCGCACTGAGGCAAAGACTCCCAAAGTGTTTTTGAAATCCCGTGGAGGTATTGTGGAGCAAGTAGCC
GCATCTGGTTTCTCTGTTTTGGAACTACCTGTTTTTTATGTCACTCCCCATTATTTGGTTTTTGGAGTCATAACGAAGAAGGAGTAA
Protein sequenceShow/hide protein sequence
MGKKCRLSAVARRSRLEAASRASKPFVQQRSVVSRSVVRQSSCPSASVHPSVHWSAILFFRLHSTIKYHFSSIHHRISPLILFYYTPPRTEAKTPKVFLKSRGGIVEQVA
ASGFSVLELPVFYVTPHYLVFGVITKKE