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Clc09G07560 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G07560
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUPF0690 protein C1orf52-like protein
Genome locationClcChr09:6076381..6078864
RNA-Seq ExpressionClc09G07560
SyntenyClc09G07560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146968.1 histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus]7.7e-7888.02Show/hide
Query:  MKRAIPWS-DEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRET
        MKRA+PWS DEEDNSSSLSQSDSD DEDNGETKASFRVKAGRSSKEKDTEVK GGKRK+VAVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWS GRET
Subjt:  MKRAIPWS-DEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRET

Query:  RENRETEESYEERQKTRAALENGEQLLTAQTR------------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RENRE EESYEERQ+TRAALENGEQLLTAQTR            KEKEKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  RENRETEESYEERQKTRAALENGEQLLTAQTR------------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_008451298.1 PREDICTED: putative uncharacterized protein DDB_G0271982 [Cucumis melo]2.6e-8191.98Show/hide
Query:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR
        MKRA+PWSDEEDNSSSLSQSDSD DEDNGETKASFRVK GRSSKEKDTEVKSGGKRK+VAVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTGRETR
Subjt:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR

Query:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ENRETEESYEERQKTRAALENGEQLLTAQTRKEK        EKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022953507.1 UPF0690 protein C1orf52 homolog [Cucurbita moschata]2.3e-7489.07Show/hide
Query:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKRKN+AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
Subjt:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RETRENR+TEESYEERQKTRAALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_022991319.1 UPF0690 protein C1orf52 homolog [Cucurbita maxima]4.0e-7489.07Show/hide
Query:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKRK++AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
Subjt:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RETRENRETEESYEERQKTRAALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

XP_038896833.1 UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida]6.1e-8394.59Show/hide
Query:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR
        MKRAIPWSDEEDNSSSLSQSDSD DEDNGETKASFRVKAGRSSKEKD EVKSGGKRK+VAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR
Subjt:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR

Query:  ENRETEESYEERQKTRAALENGEQLLTAQTR------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ENRETEESYEERQKTRAALENGEQLLTAQTR      KEKEKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  ENRETEESYEERQKTRAALENGEQLLTAQTR------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

TrEMBL top hitse value%identityAlignment
A0A0A0K4X3 Uncharacterized protein3.7e-7888.02Show/hide
Query:  MKRAIPWS-DEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRET
        MKRA+PWS DEEDNSSSLSQSDSD DEDNGETKASFRVKAGRSSKEKDTEVK GGKRK+VAVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWS GRET
Subjt:  MKRAIPWS-DEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRET

Query:  RENRETEESYEERQKTRAALENGEQLLTAQTR------------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RENRE EESYEERQ+TRAALENGEQLLTAQTR            KEKEKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  RENRETEESYEERQKTRAALENGEQLLTAQTR------------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A1S3BRX7 Uncharacterized protein1.2e-8191.98Show/hide
Query:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR
        MKRA+PWSDEEDNSSSLSQSDSD DEDNGETKASFRVK GRSSKEKDTEVKSGGKRK+VAVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTGRETR
Subjt:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR

Query:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ENRETEESYEERQKTRAALENGEQLLTAQTRKEK        EKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A5D3DRL7 UPF0690 protein C1orf52-like protein1.2e-8191.98Show/hide
Query:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR
        MKRA+PWSDEEDNSSSLSQSDSD DEDNGETKASFRVK GRSSKEKDTEVKSGGKRK+VAVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTGRETR
Subjt:  MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETR

Query:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        ENRETEESYEERQKTRAALENGEQLLTAQTRKEK        EKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
Subjt:  ENRETEESYEERQKTRAALENGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1GNF0 UPF0690 protein C1orf52 homolog1.1e-7489.07Show/hide
Query:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKRKN+AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
Subjt:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RETRENR+TEESYEERQKTRAALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

A0A6J1JUH2 UPF0690 protein C1orf52 homolog1.9e-7489.07Show/hide
Query:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
        MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKRK++AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG
Subjt:  MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTG

Query:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        RETRENRETEESYEERQKTRAALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  RETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04614.1 unknown protein9.2e-2947.34Show/hide
Query:  KRAIPWSDEEDN--------SSSLSQSDSDIDE-DNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWS
        K  + W D++D+        SSS S SDS++D  + GE K        R SK+    +    K+   A D+++L++HGYK    +  +P P   EKQDWS
Subjt:  KRAIPWSDEEDN--------SSSLSQSDSDIDE-DNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWS

Query:  WSTGRETRENRETEESYEERQKTR-AALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT
        W+TG++ +   E +ESY+ER+ TR AA+  GE +  AQ R   ++KN SFSQKEK+KR+LGQASRGKNYVEEEKR LRESG+YSGFD+
Subjt:  WSTGRETRENRETEESYEERQKTR-AALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGGCAATCCCATGGAGTGATGAAGAGGACAATTCCTCATCTTTATCACAGTCGGATTCAGACATTGATGAAGATAATGGCGAGACAAAAGCAAGCTTTCGAGT
TAAAGCTGGCCGGTCCTCTAAAGAAAAAGACACTGAAGTCAAATCTGGAGGAAAGCGGAAGAATGTTGCTGTGGACTTTGATACATTGAAACGCCACGGCTACAAAGGTG
GTCCATCAGTCTTGAAAGTACCACCTCCAAAAGAAAATGAGAAGCAAGATTGGTCATGGTCTACTGGCAGGGAGACTCGGGAAAACAGAGAAACTGAAGAATCGTATGAA
GAGAGACAGAAAACAAGGGCTGCATTAGAAAATGGAGAACAACTGCTAACTGCGCAAACTCGGAAGGAGAAGGAGAAGAAGAATTTTTCCTTCTCCCAGAAGGAAAAGAG
GAAAAGAGAGCTTGGTCAAGCGAGCAGGGGGAAAAACTATGTCGAAGAAGAAAAGAGAATGTTGAGGGAGAGTGGCATCTACTCTGGTTTTGATACTTGA
mRNA sequenceShow/hide mRNA sequence
GTTTATTAGTGCTTCCATCTCTATTTTCCTAAATTAAAACTTTCACAATTCAAACATTGATATTAATTAGAATGCACACTGAGTTTATTTGTGAAGTTGGAGATTTGATC
TTCAATTAATAAAAAAAAAAAGAAAGAAAAAAAGAAATTAACATTGATAAGCCCTAAGCCCCATGAACATCCGGAAAAGGGCTTCACTTTCCTGTTCCAGATTCTCACAA
TCCTTAAATTTCCAATCAAAGCTCGCTCGCCAGCTTCGGGCTTCAAATTTCCACTTGATTCACATTGCTCTGCCATGAAAAGGGCAATCCCATGGAGTGATGAAGAGGAC
AATTCCTCATCTTTATCACAGTCGGATTCAGACATTGATGAAGATAATGGCGAGACAAAAGCAAGCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAAGACACTGA
AGTCAAATCTGGAGGAAAGCGGAAGAATGTTGCTGTGGACTTTGATACATTGAAACGCCACGGCTACAAAGGTGGTCCATCAGTCTTGAAAGTACCACCTCCAAAAGAAA
ATGAGAAGCAAGATTGGTCATGGTCTACTGGCAGGGAGACTCGGGAAAACAGAGAAACTGAAGAATCGTATGAAGAGAGACAGAAAACAAGGGCTGCATTAGAAAATGGA
GAACAACTGCTAACTGCGCAAACTCGGAAGGAGAAGGAGAAGAAGAATTTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGTCAAGCGAGCAGGGGGAAAAA
CTATGTCGAAGAAGAAAAGAGAATGTTGAGGGAGAGTGGCATCTACTCTGGTTTTGATACTTGACCTTCCATTGTAAGTAAATTGTTAACAATGCATTGCATGTCAAAGC
GCTATGTTACAAGATCACATTTGCAGTGGACTGTATTATTTACCCAAAAAAAGGCAGCTGACTGGAACCGAAATCCAATGCACTGCGAGATATCAACAAACATTATTTGT
TTCGGGTTCAGTCCCCATATGTAAAGGCAGCTATCATCTTCACGGATTTAAGTTACATATGAAAATGGGGGTATAGATTTTGTACCATTTTTACTGGTTATTCAGTTGTA
TCAAGTATGATGTTCTTTTTATGATAATAGATCAAACAATTTCAGTAACCCAACAGTTGTATATGATTGTGAAAGGAGCTGTTTATCACCAAGAACTTGGGTTTGAAAAC
TCTTTTGGGGTCACTCAGGATGTTAATGGTTGAAGATGATTGCTTGATGATGATACAGGAGATTGGATGAAACCTTATCCTTAATTGCATTAAGGGGGTCAATGGTTA
Protein sequenceShow/hide protein sequence
MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYE
ERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT