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Clc09G08050 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G08050
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEthylene-responsive transcription factor
Genome locationClcChr09:6668182..6669045
RNA-Seq ExpressionClc09G08050
SyntenyClc09G08050
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PSS34893.1 Ethylene-responsive transcription factor [Actinidia chinensis var. chinensis]1.8e-3068.14Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKL
        VKYRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAA+ MRG +A LNFPEEY L + +   S SSS  +  T R+++ VFEFE LD+KL
Subjt:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKL

Query:  LDELLDF-DKETK
        L+ELLD  DK+T+
Subjt:  LDELLDF-DKETK

XP_006354501.1 PREDICTED: ethylene-responsive transcription factor ERF096-like [Solanum tuberosum]1.3e-3060Show/hide
Query:  MEDRHQRALEINGGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----S
        ME         NGGGGGGG       +KYRGVRRRPWGKFAAEIRDS R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L   S    S
Subjt:  MEDRHQRALEINGGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----S

Query:  LESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
          S SS      +      V EFE LD+KLL+ELLD D+E
Subjt:  LESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

XP_030498307.1 ethylene-responsive transcription factor ERF098-like [Cannabis sativa]8.4e-3366.13Show/hide
Query:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSLESQSSSLQNDETERK
        D  VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS+++N ET+++
Subjt:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSLESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDFDKE
        E  VFEFE LD+KLLDELLDFD +
Subjt:  EEAVFEFECLDEKLLDELLDFDKE

XP_030533861.1 ethylene-responsive transcription factor ERF096-like [Rhodamnia argentea]7.9e-3156.38Show/hide
Query:  EDRHQRALEINGGGGGGGGGG-GDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL--MNVSSLE
        +++ +  +E  GGGGGGGGGG G   V+YRGVRRRPWGKFAAEIRDS R G R+WLGTF TA EAARAYDRAA+ MRG  A LNFP E+PL     SSL 
Subjt:  EDRHQRALEINGGGGGGGGGG-GDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPL--MNVSSLE

Query:  ---------SQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKETK
                 S S   +      ++E V EFECLD+KLLDELL+ +++ K
Subjt:  ---------SQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKETK

XP_038896382.1 ethylene-responsive transcription factor 14-like [Benincasa hispida]3.4e-5889.71Show/hide
Query:  MEDRHQRALEINGGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQ
        MED  QR  EINGGGGGGGGGGG+ CVKYRGVRRRPWGKFAAEIRDS RRG RIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM VSS ESQ
Subjt:  MEDRHQRALEINGGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQ

Query:  SSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
        SSSLQNDETERKEE V EFECLDE LLDELLDF KE
Subjt:  SSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

TrEMBL top hitse value%identityAlignment
A0A2R6RXZ2 Ethylene-responsive transcription factor8.5e-3168.14Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKL
        VKYRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAA+ MRG +A LNFPEEY L + +   S SSS  +  T R+++ VFEFE LD+KL
Subjt:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKL

Query:  LDELLDF-DKETK
        L+ELLD  DK+T+
Subjt:  LDELLDF-DKETK

A0A7J0E8P0 Integrase-type DNA-binding superfamily protein8.5e-3168.14Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKL
        VKYRGVRRRPWGKFAAEIRDS R G R+WLGTF TAEEAARAYDRAA+ MRG +A LNFPEEY L + +   S SSS  +  T R+++ VFEFE LD+KL
Subjt:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKL

Query:  LDELLDF-DKETK
        L+ELLD  DK+T+
Subjt:  LDELLDF-DKETK

A0A7J6GXW5 AP2/ERF domain-containing protein4.1e-3366.13Show/hide
Query:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSLESQSSSLQNDETERK
        D  VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS+++N ET+++
Subjt:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSLESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDFDKE
        E  VFEFE LD+KLLDELLDFD +
Subjt:  EEAVFEFECLDEKLLDELLDFDKE

A0A803PGP0 Uncharacterized protein4.1e-3366.13Show/hide
Query:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSLESQSSSLQNDETERK
        D  VKYRGVRRRPWGKFAAEIRDS R G RIWLGTF TAEEAARAYDRAAF MRG  A LNFP +YP ++V           SS  S SS+++N ET+++
Subjt:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNV-----------SSLESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDFDKE
        E  VFEFE LD+KLLDELLDFD +
Subjt:  EEAVFEFECLDEKLLDELLDFDKE

M1BG41 Ethylene-responsive transcription factor6.5e-3160Show/hide
Query:  MEDRHQRALEINGGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----S
        ME         NGGGGGGG       +KYRGVRRRPWGKFAAEIRDS R+G R+WLGTF TAEEAARAYDRAA+ MRG LA LNFPEEY L   S    S
Subjt:  MEDRHQRALEINGGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----S

Query:  LESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE
          S SS      +      V EFE LD+KLL+ELLD D+E
Subjt:  LESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKE

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI56.3e-2360.58Show/hide
Query:  KYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----SLESQSSSLQNDETERKEEA------VF
        KYRGVRRRPWGK+AAEIRDS R G R+WLGTFETAEEAA AYDRAAFRMRG  A LNFP E    +VS    SL S S +  N+      E       VF
Subjt:  KYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS----SLESQSSSLQNDETERKEEA------VF

Query:  EFEC
        E  C
Subjt:  EFEC

P93822 Ethylene-responsive transcription factor 146.9e-3059.5Show/hide
Query:  GGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERK
        GG   G GGGG    KYRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SS  + +SS  + +    
Subjt:  GGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDF
           VFEFE LD+ +LDELL++
Subjt:  EEAVFEFECLDEKLLDELLDF

Q9LSX0 Ethylene-responsive transcription factor ERF0961.9e-2758.97Show/hide
Query:  GGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSLESQSSSLQNDETERKEEA
        GG G G    KYRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY + +   SS     SS  +         
Subjt:  GGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSLESQSSSLQNDETERKEEA

Query:  VFEFECLDEKLLDELLD
        VFEFE LD+ +L+ELL+
Subjt:  VFEFECLDEKLLDELLD

Q9LTC5 Ethylene-responsive transcription factor ERF0981.2e-2956Show/hide
Query:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSLESQSSSLQNDETERKE
        D   ++RGVRRRPWGKFAAEIRD  R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P    SS  S S S   + + + +
Subjt:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSLESQSSSLQNDETERKE

Query:  EAVFEFECLDEKLLDELLDFDKETK
          VFEFE LD+K+L+ELLD ++  +
Subjt:  EAVFEFECLDEKLLDELLDFDKETK

Q9LTC6 Ethylene-responsive transcription factor ERF0951.4e-2755.93Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSLESQSSSLQNDETERKEEAVFEF
        +KYRGVR+RPWGK+AAEIRDS R G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + +++ S SS  +          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSLESQSSSLQNDETERKEEAVFEF

Query:  ECLDEKLLDELLDFDKET
        E LD+ LL+ELLD+ + +
Subjt:  ECLDEKLLDELLDFDKET

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 144.9e-3159.5Show/hide
Query:  GGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERK
        GG   G GGGG    KYRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAA+ MRG+ A LNFP EY +   SS  + +SS  + +    
Subjt:  GGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVSSLESQSSSLQNDETERK

Query:  EEAVFEFECLDEKLLDELLDF
           VFEFE LD+ +LDELL++
Subjt:  EEAVFEFECLDEKLLDELLDF

AT3G23220.1 Integrase-type DNA-binding superfamily protein1.0e-2855.93Show/hide
Query:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSLESQSSSLQNDETERKEEAVFEF
        +KYRGVR+RPWGK+AAEIRDS R G R+WLGTF TAE+AARAYDRAAF MRGQ A LNFP EY +M       + +++ S SS  +          V EF
Subjt:  VKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLM-------NVSSLESQSSSLQNDETERKEEAVFEF

Query:  ECLDEKLLDELLDFDKET
        E LD+ LL+ELLD+ + +
Subjt:  ECLDEKLLDELLDFDKET

AT3G23230.1 Integrase-type DNA-binding superfamily protein8.4e-3156Show/hide
Query:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSLESQSSSLQNDETERKE
        D   ++RGVRRRPWGKFAAEIRD  R G R+WLGTFETAEEAARAYDRAAF +RG LA LNFP EY          P    SS  S S S   + + + +
Subjt:  DMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEY----------PLMNVSSLESQSSSLQNDETERKE

Query:  EAVFEFECLDEKLLDELLDFDKETK
          VFEFE LD+K+L+ELLD ++  +
Subjt:  EAVFEFECLDEKLLDELLDFDKETK

AT5G43410.1 Integrase-type DNA-binding superfamily protein1.3e-2858.97Show/hide
Query:  GGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSLESQSSSLQNDETERKEEA
        GG G G    KYRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AA+ MRGQ A LNFP EY + +   SS     SS  +         
Subjt:  GGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMN--VSSLESQSSSLQNDETERKEEA

Query:  VFEFECLDEKLLDELLD
        VFEFE LD+ +L+ELL+
Subjt:  VFEFECLDEKLLDELLD

AT5G47220.1 ethylene responsive element binding factor 27.1e-2244.37Show/hide
Query:  TEMEDRHQRALEINGGGGGGGGGGGDMCVK---YRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFP------EEY
        T ME++ ++A+ +            +  VK   YRGVR+RPWGKFAAEIRD  + G R+WLGTFETAE+AA AYD AAFRMRG  A LNFP      E  
Subjt:  TEMEDRHQRALEINGGGGGGGGGGGDMCVK---YRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFP------EEY

Query:  PLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKLLDELL
        P+   S   S SSS  +  T   E    +     E L  E++
Subjt:  PLMNVSSLESQSSSLQNDETERKEEAVFEFECLDEKLLDELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGGAAGGAAAGCAAAATGAAAAAAGGCACAAATACCGAAATGGAAGATCGTCACCAGAGAGCACTGGAGATCAACGGCGGGGGCGGCGGGGGCGGCGGAGGAGG
AGGAGATATGTGTGTGAAGTACAGAGGAGTACGGCGGCGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGGGACTCGAGGCGGCGGGGGGTTCGGATTTGGCTGGGGACTT
TTGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCTTTCAGAATGAGAGGCCAATTAGCCACTTTGAATTTTCCGGAGGAATATCCATTGATGAACGTTTCG
AGCTTGGAATCTCAATCAAGTTCGTTGCAGAATGATGAAACAGAGAGAAAAGAAGAAGCGGTATTTGAGTTTGAGTGTTTGGATGAGAAATTGTTGGATGAACTTCTTGA
CTTTGACAAGGAAACCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATGGAAGGAAAGCAAAATGAAAAAAGGCACAAATACCGAAATGGAAGATCGTCACCAGAGAGCACTGGAGATCAACGGCGGGGGCGGCGGGGGCGGCGGAGGAGG
AGGAGATATGTGTGTGAAGTACAGAGGAGTACGGCGGCGGCCGTGGGGGAAGTTTGCGGCGGAGATTCGGGACTCGAGGCGGCGGGGGGTTCGGATTTGGCTGGGGACTT
TTGAGACGGCTGAAGAAGCGGCGAGAGCGTACGATCGAGCGGCTTTCAGAATGAGAGGCCAATTAGCCACTTTGAATTTTCCGGAGGAATATCCATTGATGAACGTTTCG
AGCTTGGAATCTCAATCAAGTTCGTTGCAGAATGATGAAACAGAGAGAAAAGAAGAAGCGGTATTTGAGTTTGAGTGTTTGGATGAGAAATTGTTGGATGAACTTCTTGA
CTTTGACAAGGAAACCAAGTGA
Protein sequenceShow/hide protein sequence
MRWKESKMKKGTNTEMEDRHQRALEINGGGGGGGGGGGDMCVKYRGVRRRPWGKFAAEIRDSRRRGVRIWLGTFETAEEAARAYDRAAFRMRGQLATLNFPEEYPLMNVS
SLESQSSSLQNDETERKEEAVFEFECLDEKLLDELLDFDKETK