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Clc09G08120 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G08120
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtodermal factor 1 like
Genome locationClcChr09:6754428..6755583
RNA-Seq ExpressionClc09G08120
SyntenyClc09G08120
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08167.1 uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa]2.8e-5785.91Show/hide
Query:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA
        MDSS  L LLLLL FAA AAE AS R PGFLFSRT GRCTAQFWSSR EAWPRMAPE+ATVAKIFGSRA ERYGSEMTLMEAA  A  EEE FGRVVKEA
Subjt:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA

Query:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC
        T ALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFAFANESC
Subjt:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC

XP_004148954.1 uncharacterized protein LOC101220310 [Cucumis sativus]3.7e-6590.73Show/hide
Query:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE
        MDSSR LNLLLLLCFAA  AE AS RRPGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA A DEEEE FGRVVKE
Subjt:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE

Query:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        AT ALLNSY RRR FPYSAWEVKTLFIKALVSKEAA LQSQRFAFANESCN
Subjt:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

XP_008451248.2 PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]1.3e-5786.58Show/hide
Query:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA
        MDSS  L LLLLL FAA AAE AS R PGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRA ERYGSEMTLMEAA  A  EEE FGRVVKEA
Subjt:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA

Query:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC
        T ALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFAFANESC
Subjt:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC

XP_022991546.1 uncharacterized protein LOC111488125 [Cucurbita maxima]4.3e-5884.11Show/hide
Query:  SRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKE
        +RLL+ LLLL FAA A EAA +RRPGFLFSRTRGRCT +FWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGRVVKE
Subjt:  SRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKE

Query:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        AT ALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFAFANESCN
Subjt:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

XP_038899192.1 uncharacterized protein LOC120086555 [Benincasa hispida]1.3e-6591.14Show/hide
Query:  MDSSRLLN-LLLLLCFA---ATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAA----AAADEEEEA
        MDSSRL N LLLLLCFA   A AAEA STRRPGFLFSRTRGRCTAQFWSS REAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAA    AAADEEEEA
Subjt:  MDSSRLLN-LLLLLCFA---ATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAA----AAADEEEEA

Query:  FGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        FGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAA LQS+RFAFANESCN
Subjt:  FGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein1.8e-6590.73Show/hide
Query:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE
        MDSSR LNLLLLLCFAA  AE AS RRPGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA A DEEEE FGRVVKE
Subjt:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAA-AADEEEEAFGRVVKE

Query:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        AT ALLNSY RRR FPYSAWEVKTLFIKALVSKEAA LQSQRFAFANESCN
Subjt:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

A0A1S3BQF6 uncharacterized protein LOC1034925956.1e-5886.58Show/hide
Query:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA
        MDSS  L LLLLL FAA AAE AS R PGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRA ERYGSEMTLMEAA  A  EEE FGRVVKEA
Subjt:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA

Query:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC
        T ALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFAFANESC
Subjt:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC

A0A5A7UZL8 Uncharacterized protein6.1e-5886.58Show/hide
Query:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA
        MDSS  L LLLLL FAA AAE AS R PGFLFSRT GRCTAQFWSSR EAWPRMAPESATVAKIFGSRA ERYGSEMTLMEAA  A  EEE FGRVVKEA
Subjt:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA

Query:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC
        T ALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFAFANESC
Subjt:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC

A0A5D3C871 Uncharacterized protein1.4e-5785.91Show/hide
Query:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA
        MDSS  L LLLLL FAA AAE AS R PGFLFSRT GRCTAQFWSSR EAWPRMAPE+ATVAKIFGSRA ERYGSEMTLMEAA  A  EEE FGRVVKEA
Subjt:  MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEA

Query:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC
        T ALLNSYARRR+FPYSAWEVKTL IKALVSKEAA LQSQRFAFANESC
Subjt:  TVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESC

A0A6J1JR18 uncharacterized protein LOC1114881252.1e-5884.11Show/hide
Query:  SRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKE
        +RLL+ LLLL FAA A EAA +RRPGFLFSRTRGRCT +FWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEEAFGRVVKE
Subjt:  SRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAA----DEEEEAFGRVVKE

Query:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
        AT ALLNSYA RR+FPY+AWEVKTL IKALVSKEAAALQSQRFAFANESCN
Subjt:  ATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein5.9e-0536.61Show/hide
Query:  CTAQFW--SSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALV--SKEA
        C+ Q W     R  W  + P++  VA  FG  A   YG++MT+ E   A D   EA+  +++EAT ALLNSY     FPY++  V T    AL+  S+  
Subjt:  CTAQFW--SSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALV--SKEA

Query:  AALQSQRFAFAN
          + + RF  AN
Subjt:  AALQSQRFAFAN

AT2G20515.1 unknown protein1.0e-3351.68Show/hide
Query:  SSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSR-AHERYGSEMTLMEAAAAADEEEEAFGRVVKEAT
        S  +L    LLCF A  + A    RPGF+++R RGRCT Q+WSS+REAWPRM PE +TV KIFG   A ER+ S++TL+E+ A  DEE  A+G ++K+  
Subjt:  SSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSR-AHERYGSEMTLMEAAAAADEEEEAFGRVVKEAT

Query:  VALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN
         AL+NSYA R+ F Y+ WEVKT+ I+A+VS+ AA  Q++ FA AN +C+
Subjt:  VALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTTCTCGCTTACTCAATCTTCTTCTCCTTCTCTGTTTCGCCGCCACCGCCGCGGAAGCAGCATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGG
AAGATGCACTGCACAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAATCGGCGACGGTAGCGAAGATTTTCGGATCGAGGGCTCATGAACGGTACG
GATCTGAAATGACGTTAATGGAAGCGGCGGCTGCGGCGGACGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGTAGCACTGTTGAATTCGTATGCTAGA
AGAAGAGAGTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGCACTTCAGTCTCAACGCTTTGCTTTTGCTAATGA
GTCTTGCAATTAG
mRNA sequenceShow/hide mRNA sequence
AAAAGAGAAAAAAAAAATTAAAATTTAAAATATATTTAAAACTTAAAAAAGGTCCCATCCCCATCCTTTTTCCAATACCCAAAATCGGAGACCAAAAGCGGAACTATGGA
TTCTTCTCGCTTACTCAATCTTCTTCTCCTTCTCTGTTTCGCCGCCACCGCCGCGGAAGCAGCATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGAT
GCACTGCACAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAATCGGCGACGGTAGCGAAGATTTTCGGATCGAGGGCTCATGAACGGTACGGATCT
GAAATGACGTTAATGGAAGCGGCGGCTGCGGCGGACGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGTAGCACTGTTGAATTCGTATGCTAGAAGAAG
AGAGTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGCACTTCAGTCTCAACGCTTTGCTTTTGCTAATGAGTCTT
GCAATTAGCTAACCAACTAGTTGGTATGTTGGAGGGTTAGATGGATTTGTCTGGTTGAACAACAAGTTTGATAATCTTTGTCAATGGATGTTTGACTCGGGTTTCACCAA
AAAAGGAAAAGTATAAAAGTTGACACACATTCAACTATACATCAAAAGTAAAAGATTGGAGAAGTGAAATAACAAAATAAGGAGATATGTGTTATGTCAATGAGCTATGT
TGTTCATACCCAACAAGCCAATGGACATTGAGTTGGGTCCTTACACGAAGAAAACTAGCTATAGATACAGGTTTCTTTAGTCAAATGAGCAAACATAGAGACATGTTGGA
TTAATTTTATATATATATATATATTATGAACTAATAATTATATCAATTCAAAACAATTTGAACTTTGAACTCTTGTAAATGTATCAATTTACACCTTATCCTCTAGATTT
TGTT
Protein sequenceShow/hide protein sequence
MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATVALLNSYAR
RREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN