| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0059617.1 DNA-directed RNA polymerases II and IV subunit 5A [Cucumis melo var. makuwa] | 1.2e-103 | 90.05 | Show/hide |
Query: MSIELFDNELATNKMVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTY
M IELFDNELA NKMVLSEEEITRLFRIRKTVFQML+DRGYFVGDFEIDMTREQFK KYGE+MKREDIVINK+KRNDSSDQIYVFFPEE KVG+K +KTY
Subjt: MSIELFDNELATNKMVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTY
Query: TQRMNSENVYRAILVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ
T RM SENV+RAILVVQQNLTPFAR C++E S HLEVFQEAELLVNIK+HVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ
Subjt: TQRMNSENVYRAILVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ
Query: VVKIIRPSETAGRYVTYRYVV
VVKIIRPSETAGRYVTYRYVV
Subjt: VVKIIRPSETAGRYVTYRYVV
|
|
| XP_022953770.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 3.8e-99 | 92.75 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVLSEEEITRLFRIRKTV QMLKDRGYFVGDFEIDM+REQFKHKYGESMKRED+VINKAKRNDSSDQIYVFFPEE KVGVKT+KTYT RM +ENV+RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARTCI+E IS+K HLEVFQEAELLVN+K+HVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 3.8e-99 | 92.27 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVL+EEEITRLFR+RKTV QMLKDRGYFVGDFE+DM+REQFK+KYGESMKREDIVINKAKRNDSSDQIY+FFPEEPKVGVKT+KTYT RM SENV+RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARTCI+E ISTK HLEVFQEAELLVNIK+HVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 2.9e-99 | 93.24 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVLSEEEITRLFRIRKTV QMLKDRGYFVGDFEIDM+REQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEE KVGVKT+KTYT RM +ENV+RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARTCI+E IS+K HLEVFQEAELLVN+K+HVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_038899369.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Benincasa hispida] | 3.8e-99 | 94.69 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVLSEEEITRLFRIRKTVFQML+DRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEE KVGVKT+KTYT RM SENV RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFART I+EV STK HLEVFQEAELLVNIKEHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3C9X8 DNA-directed RNA polymerases II and IV subunit 5A | 5.6e-104 | 90.05 | Show/hide |
Query: MSIELFDNELATNKMVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTY
M IELFDNELA NKMVLSEEEITRLFRIRKTVFQML+DRGYFVGDFEIDMTREQFK KYGE+MKREDIVINK+KRNDSSDQIYVFFPEE KVG+K +KTY
Subjt: MSIELFDNELATNKMVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTY
Query: TQRMNSENVYRAILVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ
T RM SENV+RAILVVQQNLTPFAR C++E S HLEVFQEAELLVNIK+HVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ
Subjt: TQRMNSENVYRAILVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQ
Query: VVKIIRPSETAGRYVTYRYVV
VVKIIRPSETAGRYVTYRYVV
Subjt: VVKIIRPSETAGRYVTYRYVV
|
|
| A0A6J1GQK9 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.9e-99 | 92.75 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVLSEEEITRLFRIRKTV QMLKDRGYFVGDFEIDM+REQFKHKYGESMKRED+VINKAKRNDSSDQIYVFFPEE KVGVKT+KTYT RM +ENV+RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARTCI+E IS+K HLEVFQEAELLVN+K+HVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A6J1H699 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.9e-99 | 92.27 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVL+EEEITRLFR+RKTV QMLKDRGYFVGDFE+DM+REQFK+KYGESMKREDIVINKAKRNDSSDQIY+FFPEEPKVGVKT+KTYT RM SENV+RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARTCI+E ISTK HLEVFQEAELLVNIK+HVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.4e-99 | 93.24 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVLSEEEITRLFRIRKTV QMLKDRGYFVGDFEIDM+REQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEE KVGVKT+KTYT RM +ENV+RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARTCI+E IS+K HLEVFQEAELLVN+K+HVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 1.9e-99 | 92.27 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
MVL+EEEITRLFR+RKTV QMLKDRGYFVGDFE+DM+REQFK+KYGESMKREDIVINKAKRNDSSDQIY+FFPEEPKVGVKT+KTYT RM SENV+RAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARTCI+E ISTK HLEVFQEAELLVNIK+HVLVPEHQLL+NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.4e-57 | 56.04 | Show/hide |
Query: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
EEE RL++IRKT+ Q+ DRGY V E+D T E+FK ++G+ +R D+ + A +D +DQ++VFFPEEPKVG+KTIK Y QRM EN+ RA+
Subjt: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
Query: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
+VVQQ +TP A+ + + ++ K LE F + ELL+NI EH LVPEH ++T EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGR
Subjt: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 9.2e-88 | 79.13 | Show/hide |
Query: VLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAILV
+L+EEE+ RL+RI+KT+ QML+DRGYF+ D E+ MT++QF K+G++MKRED+V KAKRND+SDQ+Y+FFP+E KVGVKT+K YT RM SENV+RAILV
Subjt: VLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAILV
Query: VQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VQQNLTPFARTCI+E IS+K HLEVFQEAE+LVNIKEHVLVPEHQ+LT EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYV
Subjt: VQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 4.2e-56 | 56.04 | Show/hide |
Query: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
EEE RL++IRKT+ Q+ DRGY V E+D T E+FK + G+ +R D+ + A +D +DQ++VFFPEEPKVG+KTIK Y QRM EN+ RA+
Subjt: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
Query: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
+VVQQ +TP A+ + + ++ K LE F + ELL+NI EH LVPEH ++T EE LL RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGR
Subjt: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.4e-56 | 55.56 | Show/hide |
Query: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
EEE RL++IRKT+ Q+ DRGY V E+D T E+F+ ++G+ +R D+ + A +D +DQ++VFFPEEPKVG+KTIK Y QRM EN+ RA+
Subjt: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
Query: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
+VVQQ +TP A+ + + ++ K LE F + ELL+NI EH LVPEH ++T EE LL RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGR
Subjt: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.4e-57 | 56.04 | Show/hide |
Query: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
EEE RL++IRKT+ Q+ DRGY V E+D T E+FK ++G+ +R D+ + A +D +DQ++VFFPEEPKVG+KTIK Y QRM EN+ RA+
Subjt: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGES-----MKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAI
Query: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
+VVQQ +TP A+ + + ++ K LE F + ELL+NI EH LVPEH ++T EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGR
Subjt: LVVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 2.4e-30 | 38.73 | Show/hide |
Query: SEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTY-TQRMNSENVYRAILVV
S E + + R+T +ML+DRGY V D +I+++ +QF+ YGE + + I+ R DSS +I V F V V ++ ++ EN+ ILV+
Subjt: SEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTY-TQRMNSENVYRAILVV
Query: QQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Q ++T A + E+ S KV E+F+ +LLVN+ +HVL P+HQ+L ++EK++LL++++++E QLPR+ DP+ RYYGL+ GQV+K+ E + +VT
Subjt: QQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
YR V
Subjt: YRYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 6.5e-89 | 79.13 | Show/hide |
Query: VLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAILV
+L+EEE+ RL+RI+KT+ QML+DRGYF+ D E+ MT++QF K+G++MKRED+V KAKRND+SDQ+Y+FFP+E KVGVKT+K YT RM SENV+RAILV
Subjt: VLSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQRMNSENVYRAILV
Query: VQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VQQNLTPFARTCI+E IS+K HLEVFQEAE+LVNIKEHVLVPEHQ+LT EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYV
Subjt: VQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 3.2e-27 | 35.64 | Show/hide |
Query: EITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKT-YTQRMNSENVYRAILVVQQN
E R + R T F+ML+DRGY V + E+ +T +F+ +GE + E + I R+D +I V F + VK+++ + Q N+ ++ ILV+Q
Subjt: EITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKT-YTQRMNSENVYRAILVVQQN
Query: LTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRY
+ FA+ + T +E F +LLVNI +H+ P+ ++L EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR
Subjt: LTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRY
Query: VV
++
Subjt: VV
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 6.9e-30 | 39.51 | Show/hide |
Query: LSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKT-YTQRMNSENVYRAILV
LS EE R + R+ QML+DRGY V D +I+++ F+ YGE + + I+ R+DS+ ++ + F V V I++ ++ E + ILV
Subjt: LSEEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESMKREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKT-YTQRMNSENVYRAILV
Query: VQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
+Q ++T A I E+ S KV E+FQ +LLVNI +H L P+HQ+L +EEK TLL++++++E QLPRI D + RYYGL++GQVVK+ E +V
Subjt: VQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYV
+R V
Subjt: TYRYV
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 9.9e-45 | 46.86 | Show/hide |
Query: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESM---KREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQ-RMNSENVYRAIL
++EITR+F++R+TV QML+DRGY + + ++++ RE+F ++ ++M +E + ++ K + +D+IYVF+PE PKVGV IK +M + V+R I+
Subjt: EEEITRLFRIRKTVFQMLKDRGYFVGDFEIDMTREQFKHKYGESM---KREDIVINKAKRNDSSDQIYVFFPEEPKVGVKTIKTYTQ-RMNSENVYRAIL
Query: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VV +T AR ++E ++ + +EVF+EAEL+ NI EH LV ++ +L ++ KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARTCINEVISTKVHLEVFQEAELLVNIKEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
TYR+ V
Subjt: VTYRYVV
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