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Clc09G08580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G08580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSIL1
Genome locationClcChr09:7215863..7216998
RNA-Seq ExpressionClc09G08580
SyntenyClc09G08580
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]1.3e-1253.73Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK
        M + F+L+PP+ E     +LWLA +CAI+W +WGERN R+FRG +RD+ +I S VRFHV  W S+SK
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK

TYK23653.1 SIL1 [Cucumis melo var. makuwa]7.3e-0850Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVR
        +I EFLL  P  E     +LW   +CA++W LWGERN+R+FRG+ER+  ++WS VR
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVR

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]8.3e-1255.22Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK
        MI+EFLLN P GE     +LW A +CAI+WVLW E N R+F G+ER   +IW  +R+HV  W SISK
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK

XP_030483308.1 uncharacterized protein LOC115699905 [Cannabis sativa]2.3e-0649.02Show/hide
Query:  RPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK
        R YLW  ++ AI+WV+W ERN+R+F GIE  V D+W  VRF    W   +K
Subjt:  RPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK

XP_031745951.1 LOW QUALITY PROTEIN: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucumis sativus]1.5e-0852.54Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHV
        MIK +LLN  +GE     +LW ASI AI+WVLW ERNSR +RG +   + +WS VR H+
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHV

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909764.0e-1255.22Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK
        MI+EFLLN P GE     +LW A +CAI+WVLW E N R+F G+ER   +IW  +R+HV  W SISK
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK

A0A5D3BWW8 Uncharacterized protein2.8e-0551.02Show/hide
Query:  ASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISKQEVI
        A +  I+WVL GERN R+FR +ER+  D+WS + FHV  WAS+ K  +I
Subjt:  ASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISKQEVI

A0A5D3D7T2 Uncharacterized protein6.2e-1353.73Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK
        M + F+L+PP+ E     +LWLA +CAI+W +WGERN R+FRG +RD+ +I S VRFHV  W S+SK
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISK

A0A5D3DJ76 SIL13.5e-0850Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVR
        +I EFLL  P  E     +LW   +CA++W LWGERN+R+FRG+ER+  ++WS VR
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVR

E5GB48 SIL12.1e-0555.81Show/hide
Query:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRG
        MI+EFLL+PP  +     +LWLA +CA+VW +WGERN R+F G
Subjt:  MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGGAGTTCCTCCTCAATCCACCGTATGGGGAGGGGCCATATCGGCCATATCTCTGGCTTGCTAGCATTTGTGCTATTGTTTGGGTGTTGTGGGGTGAGAGGAA
TAGCAGGTTGTTTAGGGGTATTGAGAGGGATGTTAGAGATATTTGGTCTTTTGTTCGGTTTCATGTTTTTCATTGGGCTTCGATTTCGAAGCAGGAAGTCATCTTCTTGC
TGGAAAGACCAAATAATCTAGGAAAAACATTCATAAGGGGAGAAGTTCCCAAACGTGGTTTCACCATTGCAGATGACATTGACAATATTCTCATGAATGAGATCAATCCG
TTTAGCTATGTATATCCATGGGCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGGAGTTCCTCCTCAATCCACCGTATGGGGAGGGGCCATATCGGCCATATCTCTGGCTTGCTAGCATTTGTGCTATTGTTTGGGTGTTGTGGGGTGAGAGGAA
TAGCAGGTTGTTTAGGGGTATTGAGAGGGATGTTAGAGATATTTGGTCTTTTGTTCGGTTTCATGTTTTTCATTGGGCTTCGATTTCGAAGCAGGAAGTCATCTTCTTGC
TGGAAAGACCAAATAATCTAGGAAAAACATTCATAAGGGGAGAAGTTCCCAAACGTGGTTTCACCATTGCAGATGACATTGACAATATTCTCATGAATGAGATCAATCCG
TTTAGCTATGTATATCCATGGGCCTTTTGA
Protein sequenceShow/hide protein sequence
MIKEFLLNPPYGEGPYRPYLWLASICAIVWVLWGERNSRLFRGIERDVRDIWSFVRFHVFHWASISKQEVIFLLERPNNLGKTFIRGEVPKRGFTIADDIDNILMNEINP
FSYVYPWAF