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Clc09G08850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G08850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 9
Genome locationClcChr09:7518269..7519902
RNA-Seq ExpressionClc09G08850
SyntenyClc09G08850
Gene Ontology termsGO:2000123 - positive regulation of stomatal complex development (biological process)
InterPro domainsIPR031753 - Stomagen
IPR038572 - Stomagen, C-terminal domain superfamily
IPR044858 - Stomagen, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593029.1 EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subsp. sororia]5.2e-3162.59Show/hide
Query:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQG-FSTGHP------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAP
        MAKAAKP  +LLLLLLL LI+ SL STMA++G FST         P F S+Q TIAPE                            +RNSRRLMIGSTAP
Subjt:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQG-FSTGHP------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAP

Query:  ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

XP_031745006.1 EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X1 [Cucumis sativus]1.8e-3667.39Show/hide
Query:  MAKAAKPVSV----LLLLLLLTLIMTSLFSTMAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPI
        MAKAAKP+SV    LLLLLLLTL +TSLFSTMAVQGFST     P F SLQPTI P                      L G+ E LR  RR+MIGSTAP 
Subjt:  MAKAAKPVSV----LLLLLLLTLIMTSLFSTMAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPI

Query:  CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

XP_031745007.1 EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 [Cucumis sativus]1.8e-3667.39Show/hide
Query:  MAKAAKPVSV----LLLLLLLTLIMTSLFSTMAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPI
        MAKAAKP+SV    LLLLLLLTL +TSLFSTMAVQGFST     P F SLQPTI P                      L G+ E LR  RR+MIGSTAP 
Subjt:  MAKAAKPVSV----LLLLLLLTLIMTSLFSTMAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPI

Query:  CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

XP_031745008.1 EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X3 [Cucumis sativus]1.8e-3667.39Show/hide
Query:  MAKAAKPVSV----LLLLLLLTLIMTSLFSTMAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPI
        MAKAAKP+SV    LLLLLLLTL +TSLFSTMAVQGFST     P F SLQPTI P                      L G+ E LR  RR+MIGSTAP 
Subjt:  MAKAAKPVSV----LLLLLLLTLIMTSLFSTMAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPI

Query:  CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

XP_038899071.1 EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida]2.7e-4375.76Show/hide
Query:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQGFSTGHPPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPICTYNEC
        MAKAAKPVSV  LLLLLTLIMT LFSTMAVQGFST HPP FFSLQ TIA E                       GKNE +RNSRRLMIGSTAPICTYNEC
Subjt:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQGFSTGHPPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPICTYNEC

Query:  RGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        RGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  RGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

TrEMBL top hitse value%identityAlignment
A0A0A0KA17 EPIDERMAL PATTERNING FACTOR-like protein 99.9e-2864.49Show/hide
Query:  MAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYH
        MAVQGFST     P F SLQPTI P                      L G+ E LR  RR+MIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYH
Subjt:  MAVQGFSTGH--PPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYH

Query:  YRCVCHR
        YRCVCHR
Subjt:  YRCVCHR

A0A3Q7XW89 EPIDERMAL PATTERNING FACTOR-like protein 91.0e-2487.1Show/hide
Query:  LNGKNE--MLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        L G NE   +RNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDP+NS YHYRCVCHR
Subjt:  LNGKNE--MLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

A0A6J1DR94 uncharacterized protein LOC1110236011.3e-3059.15Show/hide
Query:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQGFSTGHP--------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNS--RRLMIGS
        MAKAAKP SVLLLLL L ++       +AVQGF+TG          PP FS   T+A +                       GKN+MLRNS  RRLMIGS
Subjt:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQGFSTGHP--------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNS--RRLMIGS

Query:  TAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        TAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  TAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

A0A6J1H996 EPIDERMAL PATTERNING FACTOR-like protein 99.6e-3161.87Show/hide
Query:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQG-FSTGHP------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAP
        MAKAAKP+ + LLLLLL LI+ SL STMA++G FST         P F S+Q TIAPE                            +RNSRRLMIGSTAP
Subjt:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQG-FSTGHP------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAP

Query:  ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

A0A6J1KTW3 EPIDERMAL PATTERNING FACTOR-like protein 92.5e-3162.59Show/hide
Query:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQG-FSTGHP------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAP
        MAKAAKP   LLLLLLL LI+ SL STMA++G FST         P F S+Q TIAPE                            +RNSRRLMIGSTAP
Subjt:  MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQG-FSTGHP------PPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAP

Query:  ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  ICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

SwissProt top hitse value%identityAlignment
Q9SV72 EPIDERMAL PATTERNING FACTOR-like protein 94.9e-2487.04Show/hide
Query:  MLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        +L + RR MIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  MLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR

Arabidopsis top hitse value%identityAlignment
AT4G12970.1 stomagen3.5e-2587.04Show/hide
Query:  MLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
        +L + RR MIGSTAP CTYNECRGC+YKCRAEQVPVEGNDPINSAYHYRCVCHR
Subjt:  MLRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAGCTGCAAAACCAGTTTCAGTACTTCTTCTTCTCCTTCTTCTAACCCTAATTATGACCTCTCTTTTCTCAACAATGGCAGTGCAAGGATTTTCAACTGGACA
TCCACCTCCATTCTTTTCTCTACAACCAACCATCGCTCCTGAGGTTAGTCATTACCCAAATAAGTCCATTATTTTACTGATTCTACATATAATAGGAGTTAAGTTACTAA
ATGGCAAAAATGAAATGTTGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCAATATGTACTTATAATGAATGTAGAGGATGCAAATACAAATGCAGAGCTGAG
CAAGTACCTGTTGAAGGCAATGACCCAATCAATAGTGCATATCACTATAGATGTGTTTGTCATAGGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAACACACCACTCTTTTTCCTTCTCTCTCTCTCTCTTCTTTTCTATCAATTCCCATTCCCATTATTATTCTTTCAAAACTTCTCTTCTTTCTTATCCTCTCTTTTCC
AATGGCAAAAGCTGCAAAACCAGTTTCAGTACTTCTTCTTCTCCTTCTTCTAACCCTAATTATGACCTCTCTTTTCTCAACAATGGCAGTGCAAGGATTTTCAACTGGAC
ATCCACCTCCATTCTTTTCTCTACAACCAACCATCGCTCCTGAGGTTAGTCATTACCCAAATAAGTCCATTATTTTACTGATTCTACATATAATAGGAGTTAAGTTACTA
AATGGCAAAAATGAAATGTTGAGAAATTCAAGAAGGTTGATGATTGGTTCAACAGCACCAATATGTACTTATAATGAATGTAGAGGATGCAAATACAAATGCAGAGCTGA
GCAAGTACCTGTTGAAGGCAATGACCCAATCAATAGTGCATATCACTATAGATGTGTTTGTCATAGGTAACATAAAATTATTTCATATTATTGATTTATCCCATTTTCTT
AGTCTTAATTAGACGAGAGATTTTAATCCTTAATCAAGTTTACTACTTTATTTTGTTGTGTTGGTGTCACAAAAATTTTGGTGTCTGTTTTTCATAATGTAATTTTTCTT
CCTTTGATTATTATTGTAATTTAAATTGAGAGAGTTCGTCTTAATTAAGTCTATTTGTTTGTTTTTGTCTTCTTCTTTTTTTTTTTTTTTGTATGGTTAAATTTGTGTAA
GTGATTTGAAC
Protein sequenceShow/hide protein sequence
MAKAAKPVSVLLLLLLLTLIMTSLFSTMAVQGFSTGHPPPFFSLQPTIAPEVSHYPNKSIILLILHIIGVKLLNGKNEMLRNSRRLMIGSTAPICTYNECRGCKYKCRAE
QVPVEGNDPINSAYHYRCVCHR