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Clc09G08940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G08940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUPF0481 protein At3g47200-like
Genome locationClcChr09:7665070..7665944
RNA-Seq ExpressionClc09G08940
SyntenyClc09G08940
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149334.2 UPF0481 protein At3g47200 [Cucumis sativus]1.3e-1654.26Show/hide
Query:  GGDDEEMIIMENNKR---------ERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFELSK
        G DD+EM  MEN K+           D+VV+SIE+M M+LP INP+ F+Y+VP+LH K+N+ AYTPQLISIGP HHGQ Q   A+QYK + L +
Subjt:  GGDDEEMIIMENNKR---------ERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFELSK

XP_022961909.1 putative UPF0481 protein At3g02645 isoform X1 [Cucurbita moschata]5.6e-0947.14Show/hide
Query:  MENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        +E  ++ R NVV+SI++M+ +LP +N +  +++VPKL  K+N  AYTPQ+ISIGPFHH +  L+  + YK
Subjt:  MENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

XP_023547065.1 putative UPF0481 protein At3g02645 [Cucurbita pepo subsp. pepo]5.6e-0947.14Show/hide
Query:  MENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        +E  ++ R NVV+SI++M+ +LP +N +  +++VPKL  K+N  AYTPQ+ISIGPFHH +  L+  + YK
Subjt:  MENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

XP_038896405.1 UPF0481 protein At3g47200-like [Benincasa hispida]1.6e-1665.67Show/hide
Query:  NKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        +K E D+V ISI++ LMELP  NP+SF+YKVP+L  K+NET YTPQ ISIGPFHHG+P+LM  +QYK
Subjt:  NKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

XP_038899472.1 UPF0481 protein At3g47200-like [Benincasa hispida]5.8e-2263.16Show/hide
Query:  MDKKGKVGGDDEEMIIMENNK-----RERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFEL
        M KKG+V GD+E  +IMENN       E D+VVISIE+M+MELP +NP S +YKVPK H K NET YTP+ ISIGPFHHGQP+LM A+QYK + L
Subjt:  MDKKGKVGGDDEEMIIMENNK-----RERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFEL

TrEMBL top hitse value%identityAlignment
A0A067JPY4 Uncharacterized protein8.0e-0940Show/hide
Query:  DNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFELSKPIFLVPHPRQRPEYKKFIWTQE
        +N+ ISI + L  L  ++ +  +YKVPK+ Y++NE AYTPQ++SIGPFHHG+P+L   +++K     + + L        EY +FI  +E
Subjt:  DNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFELSKPIFLVPHPRQRPEYKKFIWTQE

A0A0A0K6U9 Uncharacterized protein6.1e-1754.26Show/hide
Query:  GGDDEEMIIMENNKR---------ERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFELSK
        G DD+EM  MEN K+           D+VV+SIE+M M+LP INP+ F+Y+VP+LH K+N+ AYTPQLISIGP HHGQ Q   A+QYK + L +
Subjt:  GGDDEEMIIMENNKR---------ERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFELSK

A0A1S4DVF8 UPF0481 protein At3g47200-like4.7e-0944.59Show/hide
Query:  EMIIMENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        E +I E  ++   ++VISI+  L +LP +N +  +Y+VPKL  ++N  AY PQ+ISIGPFHHG   L   ++YK
Subjt:  EMIIMENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

A0A5A7VCD8 UPF0481 protein4.7e-0944.59Show/hide
Query:  EMIIMENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        E +I E  ++   ++VISI+  L +LP +N +  +Y+VPKL  ++N  AY PQ+ISIGPFHHG   L   ++YK
Subjt:  EMIIMENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

A0A6J1HDJ8 putative UPF0481 protein At3g02645 isoform X12.7e-0947.14Show/hide
Query:  MENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        +E  ++ R NVV+SI++M+ +LP +N +  +++VPKL  K+N  AYTPQ+ISIGPFHH +  L+  + YK
Subjt:  MENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47200.1 Plant protein of unknown function (DUF247)2.0e-0440Show/hide
Query:  MYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        +++VP+    +N  AY P+++SIGP+H+G+  L   QQ+K
Subjt:  MYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

AT3G47200.2 Plant protein of unknown function (DUF247)2.0e-0440Show/hide
Query:  MYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        +++VP+    +N  AY P+++SIGP+H+G+  L   QQ+K
Subjt:  MYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

AT3G47210.1 Plant protein of unknown function (DUF247)2.4e-0545Show/hide
Query:  MYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        +++VPK   ++N  AY P+++SIGP+HHG+  L   QQ+K
Subjt:  MYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

AT4G31980.1 unknown protein2.1e-0637.31Show/hide
Query:  NKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        N+ E D +V SI+  L  L  ++ +  +YKVP    ++N  AYTP+L+S GP H G+ +L   +  K
Subjt:  NKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK

AT5G22540.1 Plant protein of unknown function (DUF247)1.5e-0442.11Show/hide
Query:  KVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK
        ++P+   ++N  AY P+++SIGP+HHG+  L   QQ+K
Subjt:  KVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGAAGGGTAAGGTTGGAGGAGATGATGAAGAGATGATTATTATGGAGAATAATAAAAGGGAGCGTGATAATGTTGTGATATCCATAGAACAAATGCTCATGGA
ACTGCCTCTTATCAATCCACAAAGCTTCATGTATAAAGTTCCCAAACTACACTACAAGGTTAACGAAACAGCCTATACGCCTCAACTCATTTCAATTGGGCCATTCCACC
ATGGCCAACCACAATTGATGACCGCACAACAATATAAAAGCTTCGAGCTCTCAAAACCTATCTTTCTCGTCCCTCACCCGAGACAGAGGCCGGAGTATAAGAAATTCATT
TGGACACAAGAGATAAAGTTTATTCATCCACCAACTATTACTGAGCTCTGCGAGGCTGGTGTCAAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGAAGGGTAAGGTTGGAGGAGATGATGAAGAGATGATTATTATGGAGAATAATAAAAGGGAGCGTGATAATGTTGTGATATCCATAGAACAAATGCTCATGGA
ACTGCCTCTTATCAATCCACAAAGCTTCATGTATAAAGTTCCCAAACTACACTACAAGGTTAACGAAACAGCCTATACGCCTCAACTCATTTCAATTGGGCCATTCCACC
ATGGCCAACCACAATTGATGACCGCACAACAATATAAAAGCTTCGAGCTCTCAAAACCTATCTTTCTCGTCCCTCACCCGAGACAGAGGCCGGAGTATAAGAAATTCATT
TGGACACAAGAGATAAAGTTTATTCATCCACCAACTATTACTGAGCTCTGCGAGGCTGGTGTCAAGATATAG
Protein sequenceShow/hide protein sequence
MDKKGKVGGDDEEMIIMENNKRERDNVVISIEQMLMELPLINPQSFMYKVPKLHYKVNETAYTPQLISIGPFHHGQPQLMTAQQYKSFELSKPIFLVPHPRQRPEYKKFI
WTQEIKFIHPPTITELCEAGVKI