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Clc09G09020 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G09020
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Genome locationClcChr09:7767494..7771557
RNA-Seq ExpressionClc09G09020
SyntenyClc09G09020
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsIPR039175 - Mitochondrial import inner membrane translocase subunit TIM22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593015.1 hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sororia]4.7e-9285.92Show/hide
Query:  MFSKAGMDSSAPKALNSDT----SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPD
        M S+A MDS  PK L+SDT    SS SSS SNYGDWKERI FPT+LAGF+GGGAGLVSK+RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPD
Subjt:  MFSKAGMDSSAPKALNSDT----SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPD

Query:  DLMNSAIAGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQ
        DLMNSAIAGFGTGALLGRLQGGRLGSVRYS++FTV GTA+DY TLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQR LGQ
Subjt:  DLMNSAIAGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQ

Query:  LNKKDP
        +N+KDP
Subjt:  LNKKDP

XP_004149781.1 uncharacterized protein LOC101211202 [Cucumis sativus]6.4e-8988.83Show/hide
Query:  MDSSAPKALNSDTSS-PSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG
        MDS  PK  NSDT    SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG
Subjt:  MDSSAPKALNSDTSS-PSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG

Query:  FGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP
        FGTGALLGRLQGGRLGSVRYSL+FT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQRALGQLNKKDP
Subjt:  FGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

XP_008458054.1 PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo]5.8e-9088.78Show/hide
Query:  MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF
        MDS  PK  NSDT   SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF
Subjt:  MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF

Query:  GTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP
        GTGALLGRLQGG+LGSVRYSLIFT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQRALGQLNKKDP
Subjt:  GTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

XP_022960027.1 uncharacterized protein LOC111460899 [Cucurbita moschata]1.1e-9185.58Show/hide
Query:  MFSKAGMDSSAPKALNSDT------SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
        M S+A MDS  PK L+SDT      SS  SS SNYGDWKERI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
Subjt:  MFSKAGMDSSAPKALNSDT------SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE

Query:  PDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRAL
        PDDLMNSAIAGFGTGALLGRLQGGRLGSVRYS++FTV GTA+DY TLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQR L
Subjt:  PDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRAL

Query:  GQLNKKDP
        GQ+NKKDP
Subjt:  GQLNKKDP

XP_038896923.1 uncharacterized protein LOC120085132 [Benincasa hispida]1.0e-9492.96Show/hide
Query:  MDSSAPKALNSDTSSP---SSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDSS PKAL+SDT SP   SSS SNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAI
Subjt:  MDSSAPKALNSDTSSP---SSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP
        AGFGTGALLGRLQGG+LGSVRYSLIFTVVGT VDY TLKLKPVLRSYKESI EESSSWMKLPEWSPI+VLDEEALAAK+AREQQLYAQRALGQLNKKDP
Subjt:  AGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

TrEMBL top hitse value%identityAlignment
A0A0A0K6T5 Uncharacterized protein3.1e-8988.83Show/hide
Query:  MDSSAPKALNSDTSS-PSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG
        MDS  PK  NSDT    SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG
Subjt:  MDSSAPKALNSDTSS-PSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAG

Query:  FGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP
        FGTGALLGRLQGGRLGSVRYSL+FT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQRALGQLNKKDP
Subjt:  FGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

A0A1S3C726 uncharacterized protein LOC1034975942.8e-9088.78Show/hide
Query:  MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF
        MDS  PK  NSDT   SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF
Subjt:  MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF

Query:  GTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP
        GTGALLGRLQGG+LGSVRYSLIFT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQRALGQLNKKDP
Subjt:  GTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

A0A5A7SIX7 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein2.8e-9088.78Show/hide
Query:  MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF
        MDS  PK  NSDT   SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF
Subjt:  MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGF

Query:  GTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP
        GTGALLGRLQGG+LGSVRYSLIFT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQRALGQLNKKDP
Subjt:  GTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

A0A6J1DTZ3 uncharacterized protein LOC1110239752.2e-8784.42Show/hide
Query:  MDSSAPKALNSDT---SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI
        MDS  PK L+S+T   SS SSS SNYGDWK+RIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYA NLSIV ACYCGAREFVRV R+SEPDDLMNSAI
Subjt:  MDSSAPKALNSDT---SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAI

Query:  AGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP
        AGFGTGA+LGRLQGG+LGSVRYSL+FTVVGT  DY TLKL+P  RSYKES+ EES +WMKLPEWSPIQVLDEEALAAK+AREQQLYAQR LGQLNKK+P
Subjt:  AGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

A0A6J1H677 uncharacterized protein LOC1114608995.1e-9285.58Show/hide
Query:  MFSKAGMDSSAPKALNSDT------SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
        M S+A MDS  PK L+SDT      SS  SS SNYGDWKERI FPT+LAGFVGGGAGLVSK+RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE
Subjt:  MFSKAGMDSSAPKALNSDT------SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSE

Query:  PDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRAL
        PDDLMNSAIAGFGTGALLGRLQGGRLGSVRYS++FTV GTA+DY TLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLDEEALAAK+AREQQLYAQR L
Subjt:  PDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRAL

Query:  GQLNKKDP
        GQ+NKKDP
Subjt:  GQLNKKDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25120.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein3.3e-5155.44Show/hide
Query:  DSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFG
        D  +P+  N   S P+      G   +R+   +LLAG +GGGAGLVSK+R  H   NI   YA N +IVA CYCGARE VR++RRSE DDLMNSAI G  
Subjt:  DSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFG

Query:  TGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKK
        +GALLGRLQGG  G++RYSL+F  VGTA DY TLK KP+L SY+      +    KLPEWSPI+VLDEEALA K+A E++++ +R LG+LNK+
Subjt:  TGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTAAAGCTGGAATGGATTCATCAGCTCCAAAAGCCCTAAATTCTGACACTTCTTCTCCTTCTTCTTCTCCTTCAAACTATGGCGATTGGAAGGAACGTATCTT
CTTTCCCACTCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTCGCTAACATTTCGGCGACTTATGCTACTAATTTGT
CAATTGTCGCTGCTTGCTACTGCGGTGCACGTGAGTTTGTCAGAGTTTCTCGAAGGTCAGAACCTGATGATCTTATGAACTCTGCAATAGCAGGTTTTGGAACTGGAGCT
CTTCTTGGACGCCTTCAAGGTGGTCGGCTCGGTTCTGTTCGATACTCGTTGATCTTCACCGTTGTTGGGACAGCAGTAGATTATGGCACACTTAAACTAAAACCCGTTTT
AAGAAGCTACAAAGAATCGATAATTGAAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCTATTCAAGTTCTTGATGAGGAAGCTTTAGCTGCTAAAGAAGCTC
GAGAACAACAGCTCTACGCACAGCGGGCACTTGGGCAATTAAACAAAAAAGATCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAATTAAAACTTTCGAGATGAAAATAATATTTTAACATTAATATTTTGATTAGAGGCTGATGACTGAAAGTGACGCCTTCTTTCCATAGTTTTGATATTCATATGTT
CGATCATATAACATTTGGCGTCGGATGTTCTCTAAAGCTGGAATGGATTCATCAGCTCCAAAAGCCCTAAATTCTGACACTTCTTCTCCTTCTTCTTCTCCTTCAAACTA
TGGCGATTGGAAGGAACGTATCTTCTTTCCCACTCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTCGCTAACATTT
CGGCGACTTATGCTACTAATTTGTCAATTGTCGCTGCTTGCTACTGCGGTGCACGTGAGTTTGTCAGAGTTTCTCGAAGGTCAGAACCTGATGATCTTATGAACTCTGCA
ATAGCAGGTTTTGGAACTGGAGCTCTTCTTGGACGCCTTCAAGGTGGTCGGCTCGGTTCTGTTCGATACTCGTTGATCTTCACCGTTGTTGGGACAGCAGTAGATTATGG
CACACTTAAACTAAAACCCGTTTTAAGAAGCTACAAAGAATCGATAATTGAAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCTATTCAAGTTCTTGATGAGG
AAGCTTTAGCTGCTAAAGAAGCTCGAGAACAACAGCTCTACGCACAGCGGGCACTTGGGCAATTAAACAAAAAAGATCCTTGAGACATTTTATTTTCCCCATTGATCATG
GAAGAAATGATCTGAAGTTTTTGTTTTTTTATTATACCATATGATGGGGACTAGTGATAATAAGAAGAGAATGCTGATATTTGTCGTTTTTGTTTTTCTTCTTGCTGGTG
CTGCATTCTATTTTTCTTTCTTGTATTTACAAATTTTCTTTATAATCTAAATGTTGCCCAAATTCATGTTCAATTTCATAATTATATTTCATAAAATGATTAACATGTCT
CATGATCATAACATAAAGTGTTATAGTT
Protein sequenceShow/hide protein sequence
MFSKAGMDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGA
LLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP