CuGenDBv2

Gene ID	Clc09G09540
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	CLAVATA3/ESR (CLE)-related protein 41-like
Genome location	ClcChr09:8216270..8216920
RNA-Seq Expression	Clc09G09540
Synteny	Clc09G09540
Gene Ontology terms	GO:0010089 - xylem development (biological process) GO:0110165 - cellular anatomical structure (cellular component) GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domains	IPR037495 - CLAVATA3/ESR (CLE)-related protein 41/42/44

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8646241.1 hypothetical protein Csa_015939 [Cucumis sativus]

1.8e-32

74.34

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPSMAAHRHRLLSASSTVFHPTKSRPR-TSPA-MAGEFGAE
        MDIEPLWGVGGWF  LNCMA  + KQ  SSSHF      +LFLSLFFSFLLLLTLISSPP   +   HRLLSASST FHP KSRPR TSPA + G+FGAE
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPSMAAHRHRLLSASSTVFHPTKSRPR-TSPA-MAGEFGAE

Query:  AHEVPSGPNPISN
        AHEVPSGPNPISN
Subjt:  AHEVPSGPNPISN

KAG6657667.1 hypothetical protein CIPAW_04G106100 [Carya illinoinensis]

1.2e-15

53.12

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSS--ILFLSLFFSFLLLLTLISSPP-PSMA--AHRHRLL-------SASSTVFHP--TKSRPR
        MD EPLW VGGW I  NCMA   PK SS S   +  KS   +LFL + F FLLL+ LIS+P  PSMA  A   RLL       +AS+   +P  T++RP 
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSS--ILFLSLFFSFLLLLTLISSPP-PSMA--AHRHRLL-------SASSTVFHP--TKSRPR

Query:  TSPAMAG---EFGAEAHEVPSGPNPISN
        TS + +    EFGAEAHEVPSGPNPISN
Subjt:  TSPAMAG---EFGAEAHEVPSGPNPISN

XP_007140575.1 hypothetical protein PHAVU_008G124100g [Phaseolus vulgaris]

3.4e-15

50.83

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA----SSTVFHPTKSR----PRTSPAM
        MDIEPLWG+GGW  + NCMA   PK SS  S   S   S L FL+LFF  LLL+ L   P PS  A      ++    S+T  HP  S     P +  A 
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA----SSTVFHPTKSR----PRTSPAM

Query:  AGEFGAEAHEVPSGPNPISN
          EFGAEAHEVPSGPNPISN
Subjt:  AGEFGAEAHEVPSGPNPISN

XP_007201234.1 CLAVATA3/ESR (CLE)-related protein 41 [Prunus persica]

5.2e-16

50.37

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSS-------HFLSPKSSILFLSL-FFSFLLLLTLISSP----PPSMAAHRHRLL------SASSTVFHPTK
        MDIEPLW +GGWF++ NCMAA  PK S SSS       H       +LFLSL FF FLLL++ IS+P    P SMA+   RLL      + S+T  HP K
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSS-------HFLSPKSSILFLSL-FFSFLLLLTLISSP----PPSMAAHRHRLL------SASSTVFHPTK

Query:  SRPRTSPAMAG------EFGAEAHEVPSGPNPISN
        ++   + A +       EFGAEAHEVPSGPNPISN
Subjt:  SRPRTSPAMAG------EFGAEAHEVPSGPNPISN

XP_017417475.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein TDIF-like [Vigna angularis]

1.5e-15

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA-----SSTVFHPTKSRPRTSPAMAG-
        MDIEPLW +GGWF + NCMA   PK SS  S   S   S L FL+LFF  LLL+ L   P PS  A      ++     S+T  HP  S+   SP+    
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA-----SSTVFHPTKSRPRTSPAMAG-

Query:  ----EFGAEAHEVPSGPNPISN
            EFGAEAHEVPSGPNPISN
Subjt:  ----EFGAEAHEVPSGPNPISN

TrEMBL top hits

e value

%identity

Alignment

A0A0S3RV03 Uncharacterized protein

7.3e-16

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA-----SSTVFHPTKSRPRTSPAMAG-
        MDIEPLW +GGWF + NCMA   PK SS  S   S   S L FL+LFF  LLL+ L   P PS  A      ++     S+T  HP  S+   SP+    
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA-----SSTVFHPTKSRPRTSPAMAG-

Query:  ----EFGAEAHEVPSGPNPISN
            EFGAEAHEVPSGPNPISN
Subjt:  ----EFGAEAHEVPSGPNPISN

I3ST65 Uncharacterized protein

2.8e-15

49.14

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPS--MAAHRHRLLSASSTVFHP--TKSRPRTSPAMAG-EF
        MDIEPLW +GGWF++  CMA      S  S  F    + + FL+LFF  LLL+ L   P PS  MA+ +    + S+T  HP  TK+   +S   AG EF
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPS--MAAHRHRLLSASSTVFHP--TKSRPRTSPAMAG-EF

Query:  GAEAHEVPSGPNPISN
        GA+AHEVPSGPNPISN
Subjt:  GAEAHEVPSGPNPISN

I3TA81 Uncharacterized protein

4.7e-15

49.14

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPS--MAAHRHRLLSASSTVFHP--TKSRPRTSPAMAG-EF
        MDIEPLW +GGWF++  CMA      S  S  F    + + FL+LFF  LLL+ L   P PS  MA+ +    + S+T  HP  TK+   +S   AG EF
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPS--MAAHRHRLLSASSTVFHP--TKSRPRTSPAMAG-EF

Query:  GAEAHEVPSGPNPISN
        GA+AHEVPSGPNPISN
Subjt:  GAEAHEVPSGPNPISN

M5VZL5 Uncharacterized protein

2.5e-16

50.37

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSS-------HFLSPKSSILFLSL-FFSFLLLLTLISSP----PPSMAAHRHRLL------SASSTVFHPTK
        MDIEPLW +GGWF++ NCMAA  PK S SSS       H       +LFLSL FF FLLL++ IS+P    P SMA+   RLL      + S+T  HP K
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSS-------HFLSPKSSILFLSL-FFSFLLLLTLISSP----PPSMAAHRHRLL------SASSTVFHPTK

Query:  SRPRTSPAMAG------EFGAEAHEVPSGPNPISN
        ++   + A +       EFGAEAHEVPSGPNPISN
Subjt:  SRPRTSPAMAG------EFGAEAHEVPSGPNPISN

V7B413 Uncharacterized protein

1.6e-15

50.83

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Query:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA----SSTVFHPTKSR----PRTSPAM
        MDIEPLWG+GGW  + NCMA   PK SS  S   S   S L FL+LFF  LLL+ L   P PS  A      ++    S+T  HP  S     P +  A 
Subjt:  MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSIL-FLSLFFSFLLLLTLISSPPPSMAAHRHRLLSA----SSTVFHPTKSR----PRTSPAM

Query:  AGEFGAEAHEVPSGPNPISN
          EFGAEAHEVPSGPNPISN
Subjt:  AGEFGAEAHEVPSGPNPISN

SwissProt top hits

e value

%identity

Alignment

A1EC31 CLAVATA3/ESR (CLE)-related protein TDIF

2.0e-10

36.84

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Query:  MDIEPLWGVGGWFIVL------NCMAATTPKQSSSSSHFLSPK--SSILFLSLFFSFLLLLTLISS-----------PPPSMAAHRHRLLSASSTV---F
        MDI+ LW  GGWF +L       CMA    + +S  SHF +P+  SS+ F++L    +L+  L SS            P S  +H     S+++T     
Subjt:  MDIEPLWGVGGWFIVL------NCMAATTPKQSSSSSHFLSPK--SSILFLSLFFSFLLLLTLISS-----------PPPSMAAHRHRLLSASSTV---F

Query:  HPTKSRPRTSPAMAGEFGAEAHEVPSGPNPISN
        HP ++  ++ P     F A AHEVPSGPNPISN
Subjt:  HPTKSRPRTSPAMAGEFGAEAHEVPSGPNPISN

Q84W98 CLAVATA3/ESR (CLE)-related protein 41

2.1e-04

38.38

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Query:  MAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPSMAAHRHRLL-----SASSTV-FHPTKSRPRTSPAMAGEFGAEAHEVPSGPNPISN
        MA +  + ++ SSH  +     +FLSL     L + +      SM A   R+L      ASST+   P  S  R+  +   EFG +AHEVPSGPNPISN
Subjt:  MAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPSMAAHRHRLL-----SASSTV-FHPTKSRPRTSPAMAGEFGAEAHEVPSGPNPISN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24770.1 CLAVATA3/ESR-RELATED 41

1.5e-05

38.38

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Query:  MAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPSMAAHRHRLL-----SASSTV-FHPTKSRPRTSPAMAGEFGAEAHEVPSGPNPISN
        MA +  + ++ SSH  +     +FLSL     L + +      SM A   R+L      ASST+   P  S  R+  +   EFG +AHEVPSGPNPISN
Subjt:  MAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPSMAAHRHRLL-----SASSTV-FHPTKSRPRTSPAMAGEFGAEAHEVPSGPNPISN

AT4G13195.1 CLAVATA3/ESR-RELATED 44

1.7e-04

36.28

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Query:  MAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLI---------SSPPPSMAAHRHRLLSASSTVFHPTKSRPRTSPAMAG-----------EFGAE
        MA T  + S  S HF      I+ + +F +FL L+            SS   +MA  +  LL  S+      K RP   P  +G           EF AE
Subjt:  MAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLI---------SSPPPSMAAHRHRLLSASSTVFHPTKSRPRTSPAMAG-----------EFGAE

Query:  AHEVPSGPNPISN
        AHEVPSGPNPISN
Subjt:  AHEVPSGPNPISN

Sequences

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CDS sequence

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ATGGATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTATTGTCTTAAATTGCATGGCAGCTACTACACCAAAACAATCTTCTTCATCATCTCACTTTCTCTCACCAAA
ATCTTCCATTCTCTTTCTCTCTCTTTTCTTCTCCTTCCTCCTCCTTCTAACCCTCATTTCCTCTCCTCCTCCTTCCATGGCGGCCCACCGCCACCGTCTTCTCTCCGCCT
CCTCCACCGTCTTCCATCCAACAAAATCTCGACCTCGCACCTCTCCCGCAATGGCCGGAGAGTTCGGAGCTGAAGCCCATGAAGTTCCTAGTGGTCCAAACCCTATATCC
AACTAA

mRNA sequence

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TTCTTCTTAGGTTCTTAGACAATTACAAATGTGTATGGAATTTCAAGACCCTCTTTTCCCCCATTAACTTTTGTTTTGAAGCTTCTTCACCCTCTCTCTTTCTCTCTCTC
TTTCCCTTTTCCCCCCTCTCTTTGTATTTGTGTTTTTCAATCTATTACCACCCTCTCTCTGTTTGCTTTGTCTCTCTCTTCCTTCTAAGGTGTTTTGTTGCTGGTTCATG
GATATTGAACCCTTGTGGGGTGTTGGGGGGTGGTTTATTGTCTTAAATTGCATGGCAGCTACTACACCAAAACAATCTTCTTCATCATCTCACTTTCTCTCACCAAAATC
TTCCATTCTCTTTCTCTCTCTTTTCTTCTCCTTCCTCCTCCTTCTAACCCTCATTTCCTCTCCTCCTCCTTCCATGGCGGCCCACCGCCACCGTCTTCTCTCCGCCTCCT
CCACCGTCTTCCATCCAACAAAATCTCGACCTCGCACCTCTCCCGCAATGGCCGGAGAGTTCGGAGCTGAAGCCCATGAAGTTCCTAGTGGTCCAAACCCTATATCCAAC
TAATGGAAGGAAAGGAACAAAAACAAAAAAAAGAAACATTTGCAGAGGTTTGATGTTTTTTGTGTTTGTTTCATTGTCGCTGCTGATGCTTTTTTTTTTTT

Protein sequence

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MDIEPLWGVGGWFIVLNCMAATTPKQSSSSSHFLSPKSSILFLSLFFSFLLLLTLISSPPPSMAAHRHRLLSASSTVFHPTKSRPRTSPAMAGEFGAEAHEVPSGPNPIS
N

Clc09G09540 (gene) of Watermelon (cordophanus) v2 genome