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Clc09G09765 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G09765
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr09:8434127..8434564
RNA-Seq ExpressionClc09G09765
SyntenyClc09G09765
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902699.1 PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]5.1e-6476.22Show/hide
Query:  MASMKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAF
        M SMK  FLVFCFLF+LSLAI++PTK   L++W IHIVNGL+N QNL VHC+SKDDDLG++ LSVGTEFNW+F +N W+TTLFWCYL+KPNAES+SFEAF
Subjt:  MASMKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAF

Query:  WVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        WVE++SIWLFYRC+K+NCIWTAKDDGIYL+DNP NRD LVH W
Subjt:  WVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]6.7e-5671.13Show/hide
Query:  SMKKQFLVFCFLFMLSLAIIRPTKG-AVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFW
        S KK FLV  FL +LSL I+ P +  + L+KW IH+VNGL+NGQ L VHCKSKD+DLGE NL+ GTEFNW+F VN+WNTTLFWCYL KP+ +S SF+ FW
Subjt:  SMKKQFLVFCFLFMLSLAIIRPTKG-AVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFW

Query:  VEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        VEK+SIWLFYRCY +NCIWTAKDDGIYLRDNPV RD+LVH+W
Subjt:  VEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]1.9e-5067.39Show/hide
Query:  KQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQ
        K FLV  FLF+ SLAI+   +   L KW IH+ N L+N Q L VHCKSK+DDLGE NLSVGTEFNW F VNIW+TTL+WCYL+KPN +S+SF+AFWVEK 
Subjt:  KQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQ

Query:  SIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        SIWL+Y+C ++NC W AKDDGIYLR+NP  RDV VHKW
Subjt:  SIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

XP_022143829.1 S-protein homolog 74-like [Momordica charantia]6.9e-5369.29Show/hide
Query:  MKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVE
        +KK FLV   L  LSLAI+ P     L++W+IH+VNGL NG+ L VHCKS+DDDLGE+NL  G EF+W+F VN+ +TTLFWC+LRKP+A+S+SF+AFWVE
Subjt:  MKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVE

Query:  KQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        K SIWLFYRCY  NCIWTAKDDG+YLRDNPV RDVLVHKW
Subjt:  KQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]7.2e-5063.83Show/hide
Query:  MKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVE
        MKKQ +V   LF+L LAI+  TK   L+KW IH+VNGL+NGQ LL HCKSKD+DLGE+ L  GTEFNW F VN WNTTLFWCYL+KPN +  SFE+FW+E
Subjt:  MKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVE

Query:  KQSIWLFYRCYKNNCIWTAKDDGIYLRDN-PVNRDVLVHKW
         +S+WL+  C++ NCIWTAKDDGIYL+DN   ++D+L+HKW
Subjt:  KQSIWLFYRCYKNNCIWTAKDDGIYLRDN-PVNRDVLVHKW

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog2.5e-6476.22Show/hide
Query:  MASMKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAF
        M SMK  FLVFCFLF+LSLAI++PTK   L++W IHIVNGL+N QNL VHC+SKDDDLG++ LSVGTEFNW+F +N W+TTLFWCYL+KPNAES+SFEAF
Subjt:  MASMKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAF

Query:  WVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        WVE++SIWLFYRC+K+NCIWTAKDDGIYL+DNP NRD LVH W
Subjt:  WVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

A0A6J1CPR8 S-protein homolog9.2e-5167.39Show/hide
Query:  KQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQ
        K FLV  FLF+ SLAI+   +   L KW IH+ N L+N Q L VHCKSK+DDLGE NLSVGTEFNW F VNIW+TTL+WCYL+KPN +S+SF+AFWVEK 
Subjt:  KQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQ

Query:  SIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        SIWL+Y+C ++NC W AKDDGIYLR+NP  RDV VHKW
Subjt:  SIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

A0A6J1CQH6 S-protein homolog3.4e-5369.29Show/hide
Query:  MKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVE
        +KK FLV   L  LSLAI+ P     L++W+IH+VNGL NG+ L VHCKS+DDDLGE+NL  G EF+W+F VN+ +TTLFWC+LRKP+A+S+SF+AFWVE
Subjt:  MKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVE

Query:  KQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        K SIWLFYRCY  NCIWTAKDDG+YLRDNPV RDVLVHKW
Subjt:  KQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

A0A6J1CRU0 S-protein homolog3.3e-5671.13Show/hide
Query:  SMKKQFLVFCFLFMLSLAIIRPTKG-AVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFW
        S KK FLV  FL +LSL I+ P +  + L+KW IH+VNGL+NGQ L VHCKSKD+DLGE NL+ GTEFNW+F VN+WNTTLFWCYL KP+ +S SF+ FW
Subjt:  SMKKQFLVFCFLFMLSLAIIRPTKG-AVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFW

Query:  VEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        VEK+SIWLFYRCY +NCIWTAKDDGIYLRDNPV RD+LVH+W
Subjt:  VEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

A0A6J1HAC3 S-protein homolog3.9e-4157.45Show/hide
Query:  SMKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWV
        S+K Q LVF     L+LA  +P       KW+IHI N L+NGQ + VHCKSKD+DLGE  L+ GTEF W F VN W+TTLFWCYLRKPN   M+F+AFWV
Subjt:  SMKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWV

Query:  EKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
        EK++ WL  +C  N C WTA+D+GIYL+DN  N D  VH W
Subjt:  EKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 65.2e-1136.63Show/hide
Query:  NGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHK
        N   L VHCKS+DDD G   L  G  + W F VN  N+TL++C   +   +   F+ +   + S     RC   NC W AK+DGIY       ++ L +K
Subjt:  NGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHK

Query:  W
        W
Subjt:  W

F4JLS0 S-protein homolog 11.8e-2741.72Show/hide
Query:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA
        M  +K+  L  CF   L+     L     T+  ++ K   W + +VNGLT G+ L +HCKSK+DDLGE NL     F+W+F  N+ ++T FWCY+ K N 
Subjt:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA

Query:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
          M+   FW     + LF+RC   NCIWTAK DG+YL ++    DVL  KW
Subjt:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

P0DN92 S-protein homolog 243.6e-1231.69Show/hide
Query:  FCFLFMLSLAIIRPTKGAVLQKWDI------HIVNGLTNGQN---LLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFW
        FC +F++S+ +I       LQ  +       H+        N   L +HCKS+DDDLG   L+ G  F W F VN   +TL++C   +   +   FE + 
Subjt:  FCFLFMLSLAIIRPTKGAVLQKWDI------HIVNGLTNGQN---LLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFW

Query:  VEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
          +     FYRC   NC W A+ DGIY       +  L + W
Subjt:  VEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

Q2HQ46 S-protein homolog 742.3e-2740.4Show/hide
Query:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA
        M  +K+  L  CF  +L+     LA    T+  V+ K   W + + NGLT G+ L +HCKSK++DLG+ NL     F+W+F  N+ ++TLFWCY+ K + 
Subjt:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA

Query:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
          M+ + FW     + LF+RC   NC+WTAK+DG+YL ++ +  DVL  KW
Subjt:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

Q9LVX2 S-protein homolog 316.8e-1138.02Show/hide
Query:  FLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLR-KPNAESMSFEAFWVEKQSIWLFY
        FLF+ S+ I     G       I IVN L + +NL + C SK+D +G K + VG ++  SF  NIW TT F C L+ +PN     ++ F   KQ     Y
Subjt:  FLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLR-KPNAESMSFEAFWVEKQSIWLFY

Query:  RCYKNNC--IWTAKDDGIYLR
          Y N     W A++DGIYL+
Subjt:  RCYKNNC--IWTAKDDGIYLR

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family6.3e-1238.14Show/hide
Query:  FLFMLSLAIIRPTKGAVLQKWDIHIVNGLT--NGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQSIWLF
        FLF++ L +I    G   +K  I + N L   N   L VHCKSK++D+G K L +G   ++SF  N W TT FWC L K   +   +       Q+I LF
Subjt:  FLFMLSLAIIRPTKGAVLQKWDIHIVNGLT--NGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQSIWLF

Query:  YRCYKNNCIWTAKDDGIY
         +   ++  W A+DDGIY
Subjt:  YRCYKNNCIWTAKDDGIY

AT3G27680.1 Plant self-incompatibility protein S1 family4.9e-1238.02Show/hide
Query:  FLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLR-KPNAESMSFEAFWVEKQSIWLFY
        FLF+ S+ I     G       I IVN L + +NL + C SK+D +G K + VG ++  SF  NIW TT F C L+ +PN     ++ F   KQ     Y
Subjt:  FLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLR-KPNAESMSFEAFWVEKQSIWLFY

Query:  RCYKNNC--IWTAKDDGIYLR
          Y N     W A++DGIYL+
Subjt:  RCYKNNC--IWTAKDDGIYLR

AT4G16295.1 S-protein homologue 11.3e-2841.72Show/hide
Query:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA
        M  +K+  L  CF   L+     L     T+  ++ K   W + +VNGLT G+ L +HCKSK+DDLGE NL     F+W+F  N+ ++T FWCY+ K N 
Subjt:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA

Query:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
          M+   FW     + LF+RC   NCIWTAK DG+YL ++    DVL  KW
Subjt:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

AT4G29035.1 Plant self-incompatibility protein S1 family1.7e-2840.4Show/hide
Query:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA
        M  +K+  L  CF  +L+     LA    T+  V+ K   W + + NGLT G+ L +HCKSK++DLG+ NL     F+W+F  N+ ++TLFWCY+ K + 
Subjt:  MASMKKQFLVFCFLFMLS-----LAIIRPTKGAVLQK---WDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNA

Query:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW
          M+ + FW     + LF+RC   NC+WTAK+DG+YL ++ +  DVL  KW
Subjt:  ESMSFEAFWVEKQSIWLFYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKW

AT5G04350.1 Plant self-incompatibility protein S1 family1.8e-1129.23Show/hide
Query:  VFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLR-----KPNAESMSFEAFWVEK
        +F F  ++ L I        + +  + + N L + + L VHC+SKDDDLGE  L +G ++ ++F  NIW TT F C +      K + + +++E  W   
Subjt:  VFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLR-----KPNAESMSFEAFWVEK

Query:  QSIWLFYRCYKNNCIWTAKDDGIYLRDNPV
               +  + +C W  ++DGIY   + V
Subjt:  QSIWLFYRCYKNNCIWTAKDDGIYLRDNPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCATCCATGAAAAAGCAGTTTTTGGTATTTTGTTTCTTGTTTATGTTGTCATTGGCAATAATTAGGCCAACCAAGGGTGCGGTACTGCAAAAATGGGACATCCA
CATTGTGAATGGGCTAACCAATGGCCAAAACTTGCTTGTTCACTGCAAATCCAAAGACGATGATTTAGGCGAAAAAAACCTTAGCGTTGGGACTGAATTCAATTGGAGTT
TTACAGTAAATATTTGGAATACAACATTGTTTTGGTGTTACTTGCGGAAGCCAAATGCAGAATCTATGTCATTCGAGGCATTTTGGGTTGAGAAGCAATCGATTTGGCTG
TTTTATAGATGTTATAAAAACAATTGCATTTGGACCGCTAAAGATGATGGAATCTATTTGAGGGATAATCCTGTTAATAGAGATGTTTTGGTTCATAAGTGGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCATCCATGAAAAAGCAGTTTTTGGTATTTTGTTTCTTGTTTATGTTGTCATTGGCAATAATTAGGCCAACCAAGGGTGCGGTACTGCAAAAATGGGACATCCA
CATTGTGAATGGGCTAACCAATGGCCAAAACTTGCTTGTTCACTGCAAATCCAAAGACGATGATTTAGGCGAAAAAAACCTTAGCGTTGGGACTGAATTCAATTGGAGTT
TTACAGTAAATATTTGGAATACAACATTGTTTTGGTGTTACTTGCGGAAGCCAAATGCAGAATCTATGTCATTCGAGGCATTTTGGGTTGAGAAGCAATCGATTTGGCTG
TTTTATAGATGTTATAAAAACAATTGCATTTGGACCGCTAAAGATGATGGAATCTATTTGAGGGATAATCCTGTTAATAGAGATGTTTTGGTTCATAAGTGGGCATAA
Protein sequenceShow/hide protein sequence
MMASMKKQFLVFCFLFMLSLAIIRPTKGAVLQKWDIHIVNGLTNGQNLLVHCKSKDDDLGEKNLSVGTEFNWSFTVNIWNTTLFWCYLRKPNAESMSFEAFWVEKQSIWL
FYRCYKNNCIWTAKDDGIYLRDNPVNRDVLVHKWA