; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G09800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G09800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr09:8457554..8458018
RNA-Seq ExpressionClc09G09800
SyntenyClc09G09800
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]1.9e-4568.97Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        LEKW IH+VNGLS GQ+LL HCKSKDNDLGE  L A +EFNW FRVN W++TLFWC+L+KPNGQH SFE+FW+E  S+WLY  C E NC WTAKDDGIYL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPD-KTQLLIHKWD
         +N D    +LIHKW+
Subjt:  ANNPD-KTQLLIHKWD

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]1.7e-4960.67Show/hide
Query:  IGAKKMKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ
        +G +  KK    +LV +LVL LV +  +E  +E   L+KW+IH+VNGLS GQ L VHCKSKDNDLGEHNL + +EFNW+FRVNLW++TLFWC+L KP+G+
Subjt:  IGAKKMKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ

Query:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
          SF+ FWVEK+SIWL+YRC  SNC WTAKDDGIYL +NP +  +L+H+W
Subjt:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]7.6e-5065.41Show/hide
Query:  LVLVFVGRME--QMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY
        LV +FV  +   +  E  PL KW+IH+ N LS  QML VHCKSK++DLGEHNL+  +EFNW FRVN+WD+TL+WC+L+KPNGQ  SF+AFWVEK+SIWLY
Subjt:  LVLVFVGRME--QMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY

Query:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        Y+CLESNCTW AKDDGIYL NNPD   + +HKW
Subjt:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]3.0e-4659.18Show/hide
Query:  MKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFE
        MKK+ V+ L V+ + +L       +  +   LEKW IH+VNGLS GQ+LL HCKSKDNDLGE  L A +EFNW FRVN W++TLFWC+L+KPNGQH SFE
Subjt:  MKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFE

Query:  AFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPD-KTQLLIHKWD
        +FW+E  S+WLY  C E NC WTAKDDGIYL +N D    +LIHKW+
Subjt:  AFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPD-KTQLLIHKWD

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]1.9e-4558.96Show/hide
Query:  LVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY
        +VL  V    M    + + L KW+IH+VNGLS GQ+L VHCKSKDNDLGEH L+  +EFNW FRVN W++TLFWC+L+KPN QH SF+AFW+E  S+WLY
Subjt:  LVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY

Query:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWD
          C +SNC W AKDDG+YL +N +   +LIHKW+
Subjt:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWD

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog3.4e-4364.04Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        LE+W IHIVNGLS  Q L VHC+SKD+DLG+  L+  +EFNW+F++N WD+TLFWC+L+KPN +  SFEAFWVE++SIWL+YRC +SNC WTAKDDGIYL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKW
         +NP     L+H W
Subjt:  ANNPDKTQLLIHKW

A0A6J1CPR8 S-protein homolog3.7e-5065.41Show/hide
Query:  LVLVFVGRME--QMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY
        LV +FV  +   +  E  PL KW+IH+ N LS  QML VHCKSK++DLGEHNL+  +EFNW FRVN+WD+TL+WC+L+KPNGQ  SF+AFWVEK+SIWLY
Subjt:  LVLVFVGRME--QMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLY

Query:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        Y+CLESNCTW AKDDGIYL NNPD   + +HKW
Subjt:  YRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

A0A6J1CQH6 S-protein homolog2.6e-4355.33Show/hide
Query:  IGAKKMKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ
        +G + +KK    +LVV+L L L  V    +      L++W IH+VNGL  G++L VHCKS+D+DLGE NL   +EF+W+FRVN+ D+TLFWCFLRKP+ Q
Subjt:  IGAKKMKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ

Query:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
          SF+AFWVEK SIWL+YRC ++NC WTAKDDG+YL +NP +  +L+HKW
Subjt:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

A0A6J1CRU0 S-protein homolog8.2e-5060.67Show/hide
Query:  IGAKKMKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ
        +G +  KK    +LV +LVL LV +  +E  +E   L+KW+IH+VNGLS GQ L VHCKSKDNDLGEHNL + +EFNW+FRVNLW++TLFWC+L KP+G+
Subjt:  IGAKKMKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQ

Query:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
          SF+ FWVEK+SIWL+YRC  SNC WTAKDDGIYL +NP +  +L+H+W
Subjt:  HKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

A0A6J1KS80 S-protein homolog5.9e-4054.96Show/hide
Query:  VLVF-VGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYR
        VLVF V     +A   P  KWEIHI NGLS GQ + VHC+SKDNDLGEH L  ++EF W F+VNLWD+TL+WC+LRKPNG   +F++FWVEK + WL  +
Subjt:  VLVF-VGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYR

Query:  CLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        C ++ C WTA+D+GIYL +N +     +H W
Subjt:  CLESNCTWTAKDDGIYLANNPDKTQLLIHKW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 68.6e-1229.71Show/hide
Query:  VVVLVLVLVFVGRMEQMAEGS--PLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE
        +++ ++++  +G      +G   P++     +V       +L VHCKS+D+D G H L     + W F VN  +STL++C   +   +   F+ +   ++
Subjt:  VVVLVLVLVFVGRMEQMAEGS--PLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKE

Query:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        S     RC   NCTW AK+DGIY      K   L +KW
Subjt:  SIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

F4JLS0 S-protein homolog 19.4e-2743.48Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ +VNGL+ G+ L +HCKSK++DLGE NL   + F+W+F  N+  ST FWC++ K NG H +   FW   + + L++RC   NC WTAK DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKWD
         N+     +L  KW+
Subjt:  ANNPDKTQLLIHKWD

P0DN92 S-protein homolog 241.3e-1229.5Show/hide
Query:  IWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK
        I++V ++V+ L+    ++      P+      +        +L +HCKS+D+DLG H L     F W F VN   STL++C   +   +   FE +   +
Subjt:  IWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEK

Query:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        +    +YRC  +NCTW A+ DGIY  +       L + W
Subjt:  ESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

Q2HQ46 S-protein homolog 744.7e-2642.98Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ + NGL+ G+ L +HCKSK+NDLG+ NL     F+W+F  N+  STLFWC++ K +G H + + FW   + + L++RC   NC WTAK+DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKW
         N+     +L  KW
Subjt:  ANNPDKTQLLIHKW

Q9FI84 S-protein homolog 276.6e-1229.68Show/hide
Query:  MIIGAKKMKKETVIWLVVVLVLVLVFV---GRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLR
        MI  + K    +    +  + +V++FV      +Q  E  P+      I    +   +L +HCKSKD+DLG H       + W F VN  +STL++C   
Subjt:  MIIGAKKMKKETVIWLVVVLVLVLVFV---GRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLR

Query:  KPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        +       F+    E++    +YRC   NCTW AK D +Y  +N  +T     KW
Subjt:  KPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.2e-1032.65Show/hide
Query:  PLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDG
        P  +  +  +  L  G  L +HCKSK +DLG H +    E+++ F+ NLW STLF+C  +  + Q KSF+ +  +++      + +  +C W  K DG
Subjt:  PLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDG

AT4G16295.1 S-protein homologue 16.7e-2843.48Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ +VNGL+ G+ L +HCKSK++DLGE NL   + F+W+F  N+  ST FWC++ K NG H +   FW   + + L++RC   NC WTAK DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKWD
         N+     +L  KW+
Subjt:  ANNPDKTQLLIHKWD

AT4G29035.1 Plant self-incompatibility protein S1 family3.3e-2742.98Show/hide
Query:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL
        + +W++ + NGL+ G+ L +HCKSK+NDLG+ NL     F+W+F  N+  STLFWC++ K +G H + + FW   + + L++RC   NC WTAK+DG+YL
Subjt:  LEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYL

Query:  ANNPDKTQLLIHKW
         N+     +L  KW
Subjt:  ANNPDKTQLLIHKW

AT5G04350.1 Plant self-incompatibility protein S1 family1.6e-1335Show/hide
Query:  EIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFL-RKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANN
        ++ + N L   ++L VHC+SKD+DLGEH L    ++ ++F  N+W +T F C + + PN +H      +V  E+ W   + LE++C W  ++DGIY + +
Subjt:  EIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFL-RKPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANN

AT5G06020.1 Plant self-incompatibility protein S1 family4.7e-1329.68Show/hide
Query:  MIIGAKKMKKETVIWLVVVLVLVLVFV---GRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLR
        MI  + K    +    +  + +V++FV      +Q  E  P+      I    +   +L +HCKSKD+DLG H       + W F VN  +STL++C   
Subjt:  MIIGAKKMKKETVIWLVVVLVLVLVFV---GRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLR

Query:  KPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW
        +       F+    E++    +YRC   NCTW AK D +Y  +N  +T     KW
Subjt:  KPNGQHKSFEAFWVEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTGGAGCGAAAAAGATGAAGAAGGAGACAGTAATTTGGTTGGTGGTTGTGTTGGTGTTGGTGTTGGTGTTTGTGGGGAGAATGGAGCAAATGGCCGAAGGAAG
CCCTCTTGAGAAATGGGAAATTCACATAGTGAATGGGCTAAGCAAAGGCCAAATGTTGCTTGTTCACTGCAAATCAAAAGACAATGATCTTGGAGAACACAACCTCACAG
CTGCCTCTGAATTCAATTGGTCTTTCAGAGTTAACTTGTGGGACTCAACCTTGTTTTGGTGTTTCCTAAGAAAGCCAAATGGACAACATAAGTCTTTTGAGGCTTTTTGG
GTTGAAAAAGAGTCCATTTGGCTCTATTATAGATGCTTGGAATCCAATTGCACTTGGACTGCCAAAGATGATGGAATCTACCTTGCAAACAACCCTGACAAGACTCAACT
TTTGATTCATAAATGGGATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAATTGGAGCGAAAAAGATGAAGAAGGAGACAGTAATTTGGTTGGTGGTTGTGTTGGTGTTGGTGTTGGTGTTTGTGGGGAGAATGGAGCAAATGGCCGAAGGAAG
CCCTCTTGAGAAATGGGAAATTCACATAGTGAATGGGCTAAGCAAAGGCCAAATGTTGCTTGTTCACTGCAAATCAAAAGACAATGATCTTGGAGAACACAACCTCACAG
CTGCCTCTGAATTCAATTGGTCTTTCAGAGTTAACTTGTGGGACTCAACCTTGTTTTGGTGTTTCCTAAGAAAGCCAAATGGACAACATAAGTCTTTTGAGGCTTTTTGG
GTTGAAAAAGAGTCCATTTGGCTCTATTATAGATGCTTGGAATCCAATTGCACTTGGACTGCCAAAGATGATGGAATCTACCTTGCAAACAACCCTGACAAGACTCAACT
TTTGATTCATAAATGGGATAATTAA
Protein sequenceShow/hide protein sequence
MIIGAKKMKKETVIWLVVVLVLVLVFVGRMEQMAEGSPLEKWEIHIVNGLSKGQMLLVHCKSKDNDLGEHNLTAASEFNWSFRVNLWDSTLFWCFLRKPNGQHKSFEAFW
VEKESIWLYYRCLESNCTWTAKDDGIYLANNPDKTQLLIHKWDN