; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G09880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G09880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionS-protein homolog
Genome locationClcChr09:8488191..8488619
RNA-Seq ExpressionClc09G09880
SyntenyClc09G09880
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008972 - Cupredoxin
IPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050599.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]2.0e-4964.08Show/hide
Query:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW
        MG  KS I+LLVI    +TE+TQV  A   FDK+YVHIINGF + TIG HC+SKD+DL  QF+PV GEFQW+FRTNFFGTTLF+CH+WW  G +TYKAYW
Subjt:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW

Query:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWEH
           +F+   CGDGHCRWKAD +GIS + V Q  Y L YLWEH
Subjt:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWEH

KAE7997939.1 hypothetical protein FH972_002525 [Carpinus fangiana]1.6e-2539.86Show/hide
Query:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE
        H   + L+++ I +   ++Q      L  KY V + NGF + T+ + CQS+D+DLG Q +PV GEFQW+FR N++GTTL+FC++WW+ GH     +W + 
Subjt:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE

Query:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE
        +F  + CGD  CRW     GI  +  + N Y+L   WE
Subjt:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE

KAE7997940.1 hypothetical protein FH972_002526 [Carpinus fangiana]1.2e-2540.58Show/hide
Query:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE
        H   + L+++ I +   ++Q      L  KY V I NGF + T+ + CQS+D+DLG Q +PV GEFQW+FR N++GTTL+FC++WW+ GH     +W + 
Subjt:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE

Query:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE
        +F  + CGD  CRW     GI  +  + N Y+L   WE
Subjt:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE

KAE8646226.1 hypothetical protein Csa_016670 [Cucumis sativus]3.6e-4664.12Show/hide
Query:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW
        MGI KS I+LLVI I  + E+TQV  A  LF+K+YVHIINGF + TIG HC+SKD+DLG QF+PV  EF WNFRTNF GTTLF+CH+WW  GH+TYKAYW
Subjt:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW

Query:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQ
           +F+   CGDGHCRWKAD +G+S++ V Q
Subjt:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQ

XP_031745088.1 S-protein homolog 3-like [Cucumis sativus]3.6e-4664.12Show/hide
Query:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW
        MGI KS I+LLVI I  + E+TQV  A  LF+K+YVHIINGF + TIG HC+SKD+DLG QF+PV  EF WNFRTNF GTTLF+CH+WW  GH+TYKAYW
Subjt:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW

Query:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQ
           +F+   CGDGHCRWKAD +G+S++ V Q
Subjt:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQ

TrEMBL top hitse value%identityAlignment
A0A061DMI7 S-protein homolog1.4e-2437.68Show/hide
Query:  KSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFS-DVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE
        ++ +++LV+ +C +  +        + ++  VH+INGFS + T+  HC+SKD+DLG   +PV GEFQW FRT+FF  T F CH+WW+ G  T   +W ++
Subjt:  KSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFS-DVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE

Query:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE
        +F    CG G+CRW++   GI  ++     Y+  Y W+
Subjt:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE

A0A0A0K4G8 S-protein homolog5.3e-5163.38Show/hide
Query:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW
        MGI KS I+LLVI I  + E+TQV  A  LF+K+YVHIINGF + TIG HC+SKD+DLG QF+PV  EF WNFRTNF GTTLF+CH+WW  GH+TYKAYW
Subjt:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW

Query:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWEH
           +F+   CGDGHCRWKAD +G+S++ V Q  Y L YLW+H
Subjt:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWEH

A0A5A7UAS5 S-protein homolog9.9e-5064.08Show/hide
Query:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW
        MG  KS I+LLVI    +TE+TQV  A   FDK+YVHIINGF + TIG HC+SKD+DL  QF+PV GEFQW+FRTNFFGTTLF+CH+WW  G +TYKAYW
Subjt:  MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYW

Query:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWEH
           +F+   CGDGHCRWKAD +GIS + V Q  Y L YLWEH
Subjt:  DNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWEH

A0A5N6QH10 S-protein homolog7.6e-2639.86Show/hide
Query:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE
        H   + L+++ I +   ++Q      L  KY V + NGF + T+ + CQS+D+DLG Q +PV GEFQW+FR N++GTTL+FC++WW+ GH     +W + 
Subjt:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE

Query:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE
        +F  + CGD  CRW     GI  +  + N Y+L   WE
Subjt:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE

A0A5N6QIK7 S-protein homolog5.9e-2640.58Show/hide
Query:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE
        H   + L+++ I +   ++Q      L  KY V I NGF + T+ + CQS+D+DLG Q +PV GEFQW+FR N++GTTL+FC++WW+ GH     +W + 
Subjt:  HKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNE

Query:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE
        +F  + CGD  CRW     GI  +  + N Y+L   WE
Subjt:  EFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 25.7e-1026.92Show/hide
Query:  MGIHKSCILLLVICICFNTEVTQV--------------RGAIGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFC
        M I K  + L ++ I   T+++Q                 ++    K  V I N   + +T+  HC+SKD+DLG + +  G  + ++F   FFG TL+FC
Subjt:  MGIHKSCILLLVICICFNTEVTQV--------------RGAIGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFC

Query:  HIWWTEGHVTYKAYWDNEEFKRES-CGDGHCRWKADTRGISNFNVRQNVYQLLYLW
           W     ++  Y D+ +   ++ C    C WK    G   FN     + L Y W
Subjt:  HIWWTEGHVTYKAYWDNEEFKRES-CGDGHCRWKADTRGISNFNVRQNVYQLLYLW

F4JLS0 S-protein homolog 11.0e-1129.05Show/hide
Query:  SCILLLVICICFNTEVT-----QVRGA------IGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGH
        +CI   ++ ICF+  +T      V G       +    ++ V ++NG  +  T+ +HC+SK++DLGE  +     F WNF  N   +T F+C++    GH
Subjt:  SCILLLVICICFNTEVT-----QVRGA------IGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGH

Query:  VTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE
        +    +WD +      CG  +C W A T G+  +N       L   WE
Subjt:  VTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE

Q2HQ46 S-protein homolog 747.4e-1032.99Show/hide
Query:  KYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFN
        ++ V + NG  +  T+ +HC+SK+NDLG+  +     F WNF  N   +TLF+C++   +GH+  K +WD +      C   +C W A   G+  +N
Subjt:  KYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFN

Q40975 Self-incompatibility protein S11.5e-1033.9Show/hide
Query:  GLFDKYYVHIINGFSD-VTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTE----GHVTYKAYWDNEEFKRESCG--DGHCRWKADT
        G F    V I+N   +  +IG+HC+SKDNDL  Q V  G +  ++FR +FF TT F+C + W +    G  +Y+A       KR+  G     C WK   
Subjt:  GLFDKYYVHIINGFSD-VTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTE----GHVTYKAYWDNEEFKRESCG--DGHCRWKADT

Query:  RGISNFNVRQNVYQLLYL
         G+  F+    ++Q+ +L
Subjt:  RGISNFNVRQNVYQLLYL

Q9FMQ4 S-protein homolog 33.9e-1131.13Show/hide
Query:  VHIINGFSD-VTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVY
        V I N   D +T+ +HC+S D+DLG + +   G + + FRT+  GTTLF+CH  W      +  Y D+ +  R      +C W    +G   F+   + +
Subjt:  VHIINGFSD-VTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVY

Query:  QLLYLW
         + Y W
Subjt:  QLLYLW

Arabidopsis top hitse value%identityAlignment
AT3G16970.1 Plant self-incompatibility protein S1 family1.3e-0930.77Show/hide
Query:  HCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLW
        HC+SK++DLG++ + V G + + FR + FG TLFFC   W +    +  Y  + + +    G   C WK    G    N   N++ +   W
Subjt:  HCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLW

AT4G16195.1 Plant self-incompatibility protein S1 family4.0e-1126.92Show/hide
Query:  MGIHKSCILLLVICICFNTEVTQV--------------RGAIGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFC
        M I K  + L ++ I   T+++Q                 ++    K  V I N   + +T+  HC+SKD+DLG + +  G  + ++F   FFG TL+FC
Subjt:  MGIHKSCILLLVICICFNTEVTQV--------------RGAIGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFC

Query:  HIWWTEGHVTYKAYWDNEEFKRES-CGDGHCRWKADTRGISNFNVRQNVYQLLYLW
           W     ++  Y D+ +   ++ C    C WK    G   FN     + L Y W
Subjt:  HIWWTEGHVTYKAYWDNEEFKRES-CGDGHCRWKADTRGISNFNVRQNVYQLLYLW

AT4G16295.1 S-protein homologue 17.3e-1329.05Show/hide
Query:  SCILLLVICICFNTEVT-----QVRGA------IGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGH
        +CI   ++ ICF+  +T      V G       +    ++ V ++NG  +  T+ +HC+SK++DLGE  +     F WNF  N   +T F+C++    GH
Subjt:  SCILLLVICICFNTEVT-----QVRGA------IGLFDKYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGH

Query:  VTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE
        +    +WD +      CG  +C W A T G+  +N       L   WE
Subjt:  VTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVYQLLYLWE

AT4G29035.1 Plant self-incompatibility protein S1 family5.3e-1132.99Show/hide
Query:  KYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFN
        ++ V + NG  +  T+ +HC+SK+NDLG+  +     F WNF  N   +TLF+C++   +GH+  K +WD +      C   +C W A   G+  +N
Subjt:  KYYVHIINGF-SDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFN

AT5G12060.1 Plant self-incompatibility protein S1 family2.8e-1231.13Show/hide
Query:  VHIINGFSD-VTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVY
        V I N   D +T+ +HC+S D+DLG + +   G + + FRT+  GTTLF+CH  W      +  Y D+ +  R      +C W    +G   F+   + +
Subjt:  VHIINGFSD-VTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESCGDGHCRWKADTRGISNFNVRQNVY

Query:  QLLYLW
         + Y W
Subjt:  QLLYLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATCCACAAGAGCTGCATTCTCTTGCTTGTAATTTGCATTTGTTTCAACACTGAAGTAACACAAGTGAGGGGTGCGATAGGGTTGTTCGATAAGTATTACGTTCA
TATCATCAACGGCTTCAGCGACGTGACAATCGGAGTTCATTGCCAGTCAAAAGACAACGATCTTGGCGAACAATTCGTCCCGGTTGGGGGTGAGTTCCAATGGAATTTTC
GAACGAACTTCTTTGGGACGACGTTGTTTTTCTGTCATATTTGGTGGACTGAAGGGCACGTTACGTATAAGGCATATTGGGACAACGAAGAGTTTAAGAGAGAATCATGT
GGAGATGGACATTGCAGATGGAAAGCAGATACTCGAGGAATTTCCAATTTTAATGTTAGGCAAAATGTGTATCAATTGCTATACTTATGGGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATCCACAAGAGCTGCATTCTCTTGCTTGTAATTTGCATTTGTTTCAACACTGAAGTAACACAAGTGAGGGGTGCGATAGGGTTGTTCGATAAGTATTACGTTCA
TATCATCAACGGCTTCAGCGACGTGACAATCGGAGTTCATTGCCAGTCAAAAGACAACGATCTTGGCGAACAATTCGTCCCGGTTGGGGGTGAGTTCCAATGGAATTTTC
GAACGAACTTCTTTGGGACGACGTTGTTTTTCTGTCATATTTGGTGGACTGAAGGGCACGTTACGTATAAGGCATATTGGGACAACGAAGAGTTTAAGAGAGAATCATGT
GGAGATGGACATTGCAGATGGAAAGCAGATACTCGAGGAATTTCCAATTTTAATGTTAGGCAAAATGTGTATCAATTGCTATACTTATGGGAACATTGA
Protein sequenceShow/hide protein sequence
MGIHKSCILLLVICICFNTEVTQVRGAIGLFDKYYVHIINGFSDVTIGVHCQSKDNDLGEQFVPVGGEFQWNFRTNFFGTTLFFCHIWWTEGHVTYKAYWDNEEFKRESC
GDGHCRWKADTRGISNFNVRQNVYQLLYLWEH