CuGenDBv2

Gene ID	Clc09G10610
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	F-box domain-containing protein
Genome location	ClcChr09:9408073..9409194
RNA-Seq Expression	Clc09G10610
Synteny	Clc09G10610
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038162.1 F-box protein CPR30-like [Cucumis melo var. makuwa]

2.1e-45

86.41

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATC+GL+LLDNKLK GGLIVINPVTRKLTALPPGTLNSSHNESYGFAYD VSGRYKV+HLFRDALMYIS     LGTEKWRA+DGP FGLFGW GY+P
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

XP_004139751.2 F-box protein CPR1 [Cucumis sativus]

1.3e-45

85.44

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATC+GL+LLDNKLK GGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDN+SGRYKV+HLFRDALMYIS     LGTE WRA+DGP FGLFGW GY+P
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

XP_038899451.1 F-box protein CPR1-like isoform X1 [Benincasa hispida]

7.1e-49

91.26

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATCSGL+LLDNKLKRGGLIV+NPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKV+HLFRDALMYIS     LGTEKWRA+DGPSFGLFGWLGYRP
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

XP_038899452.1 F-box protein CPR1-like isoform X2 [Benincasa hispida]

7.1e-49

91.26

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATCSGL+LLDNKLKRGGLIV+NPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKV+HLFRDALMYIS     LGTEKWRA+DGPSFGLFGWLGYRP
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

XP_038899453.1 F-box protein CPR1-like isoform X3 [Benincasa hispida]

7.1e-49

91.26

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATCSGL+LLDNKLKRGGLIV+NPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKV+HLFRDALMYIS     LGTEKWRA+DGPSFGLFGWLGYRP
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

TrEMBL top hits

e value

%identity

Alignment

A0A067EQB3 Uncharacterized protein

8.3e-35

68.93

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATC+GL+LLDN LK+GGLIV+NPVTRKL ALP GTL   HNES+GFA + V+G YKV+HLFRD L Y+S   L LGT KWR ++GP+FG+FGW GYRP
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        V A
Subjt:  VEA

A0A0A0K6D7 F-box domain-containing protein

6.1e-46

85.44

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATC+GL+LLDNKLK GGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDN+SGRYKV+HLFRDALMYIS     LGTE WRA+DGP FGLFGW GY+P
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

A0A1S3CGB1 F-box protein CPR30-like

2.3e-45

85.44

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATC+GL+LLDNKLK GGLIVINPVTRKLTALPPGTLNSSHNESYGFAYD VSGRYKV+HLFRDAL+YIS     LGTEKWRA+DGP FGLFGW GY+P
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

A0A5A7T3V1 F-box protein CPR30-like

1.0e-45

86.41

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATC+GL+LLDNKLK GGLIVINPVTRKLTALPPGTLNSSHNESYGFAYD VSGRYKV+HLFRDALMYIS     LGTEKWRA+DGP FGLFGW GY+P
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

A0A6J1F6A4 F-box protein CPR30-like

4.8e-43

78.64

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Query:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP
        IRATCSGL+LLDNKLK+GGLI+ NPVTRKLT++PPGTLNS H+ESYGFAYD+V G+YKV+HLFRD LMYIS     +GT+KWRA+DGPSFGLFGWLG+RP
Subjt:  IRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHNESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRP

Query:  VEA
        VEA
Subjt:  VEA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTGGTTTGGACCTCAGACCCTATTTCGATACCGTTATGAACTCAAAAAGCTTATACTGATAAATAGAAAGTTGTTTTGCAAACTAGGGACTAATGCTGGTGAATCCAT
AATTGTCAGTTTTGAGTTTATATTCTTGTTGAGAAGAAGAGAACTCAAAAGGCAGTTCATCTTTCCATGGTTCTCAGGCCGCATTTGTCTGATTCGAGCGACCTGCAGTG
GTTTGGTATTGCTTGATAACAAATTGAAGAGAGGAGGGCTGATAGTTATTAATCCAGTGACCAGGAAGCTAACTGCTCTTCCACCAGGAACTTTGAATTCATCACATAAT
GAATCTTATGGATTTGCATATGACAATGTTTCAGGCCGATACAAAGTCATTCACTTGTTTCGCGATGCATTGATGTATATTAGTGCGAGATATTTATTCTTGGGGACTGA
AAAGTGGAGAGCTATTGATGGACCTTCTTTTGGTCTCTTTGGTTGGCTTGGATATAGACCTGTTGAAGCATAG

mRNA sequence

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Protein sequence

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MWFGPQTLFRYRYELKKLILINRKLFCKLGTNAGESIIVSFEFIFLLRRRELKRQFIFPWFSGRICLIRATCSGLVLLDNKLKRGGLIVINPVTRKLTALPPGTLNSSHN
ESYGFAYDNVSGRYKVIHLFRDALMYISARYLFLGTEKWRAIDGPSFGLFGWLGYRPVEA

Clc09G10610 (gene) of Watermelon (cordophanus) v2 genome