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Clc09G11240 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G11240
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionJ domain-containing protein
Genome locationClcChr09:9931005..9933441
RNA-Seq ExpressionClc09G11240
SyntenyClc09G11240
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607621.1 hypothetical protein SDJN03_00963, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4583.44Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRERKRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS S
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        G+S DS+ +RRK++ +EPEV+VR+LLKEFPDVGNDLKQLL MIDDGQAVDI
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

XP_004150393.1 uncharacterized protein LOC101213388 [Cucumis sativus]5.0e-5491.39Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGSRRKKKRTA SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRK+DDYGSESDNESSHS
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        G+SV++KSDRRKVKI EPEVI+RQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

XP_008461948.1 PREDICTED: uncharacterized protein LOC103500427 [Cucumis melo]1.0e-5187.74Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRN----RERDRKRRKKKLRRESKRKRDDYGSESDNE
        MGSRRKK RT  SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREK+KERESRIRDRERKRK+RN    RERDRKRRKKKLRRESKRKRDD+GS+SDNE
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRN----RERDRKRRKKKLRRESKRKRDDYGSESDNE

Query:  SSHSGDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        SSHSGDSVD+KSDRRKVKI+EPEVIVRQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Subjt:  SSHSGDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

XP_022926268.1 DNA ligase 1 [Cucurbita moschata]1.5e-4583.44Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRERKRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS S
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        G+S DS+ +RRK++ +EPEV+VR+LLKEFPDVGNDLKQLL MIDDGQAVDI
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

XP_038898675.1 DNA ligase 1 [Benincasa hispida]9.8e-5896.03Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGSRRKKKRT DS+E SSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESR RDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNES HS
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        GDSVDS+SDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

TrEMBL top hitse value%identityAlignment
A0A0A0K7U1 Uncharacterized protein2.4e-5491.39Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGSRRKKKRTA SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRK+DDYGSESDNESSHS
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        G+SV++KSDRRKVKI EPEVI+RQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

A0A1S3CFW3 uncharacterized protein LOC1035004275.1e-5287.74Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRN----RERDRKRRKKKLRRESKRKRDDYGSESDNE
        MGSRRKK RT  SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREK+KERESRIRDRERKRK+RN    RERDRKRRKKKLRRESKRKRDD+GS+SDNE
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRN----RERDRKRRKKKLRRESKRKRDDYGSESDNE

Query:  SSHSGDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        SSHSGDSVD+KSDRRKVKI+EPEVIVRQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Subjt:  SSHSGDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

A0A6J1DVD5 uncharacterized protein LOC1110234591.2e-2972.19Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGS RKK RT DS E SSSSPSS DDSD+S+ RSRRHHR G SRREKDK+RES      RKRKDR RERDRKRRKKK RRE KRKR DY SESD+ SS  
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
              +S+  KV+ IEPEV+VRQLLKEFPDVG+DL+QLLKMIDDGQAVDI
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

A0A6J1EHJ8 DNA ligase 17.1e-4683.44Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRERKRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS S
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        G+S DS+ +RRK++ +EPEV+VR+LLKEFPDVGNDLKQLL MIDDGQAVDI
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI

A0A6J1IUN5 uncharacterized protein LOC1114807508.4e-3982.73Show/hide
Query:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS
        MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRERKRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS S
Subjt:  MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHS

Query:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQL
        G+S DS+ +RRK+  IEPEV+VR+LLKEFPDVGNDLKQ+
Subjt:  GDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65280.1 DNAJ heat shock N-terminal domain-containing protein4.0e-0943.33Show/hide
Query:  RKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKD---KERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSG
        ++   + D   SS++S SSS  SD S   SR+  +    RR+ D    ERE R R RE++RK +  ER ++R+++ ++++ K K+ +Y  ESD ES    
Subjt:  RKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKD---KERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSG

Query:  DSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
        DS   + D       +PE +V+++L EFP+VGNDLKQLLKMIDDGQAVDI
Subjt:  DSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atgggtagtcggaggaagaagaagcgtactgcggattcagaagagtcttcttcctcgtcaccgtcctcctccgatgattccgacagctcctctatgcggtcgcgccgcca
tcaccgcagtggcagttctagaagggagaaggacaaggaacgagagtcgaggattagagatagggagaggaagagaaaagataggaatagggagagagatagaaagagga
gaaagaagaaattgagaagggagagcaagagaaagagggatgattatggatctgagagtgataacgagtcctcccattcaggggattctgttgatagcaagtctgataga
cggaaggtgaagattattgagcctgaagtgattgtacgccagctgctgaaggaatttcctgatgttggaaatgacttaaaacagCTTCTCAAGATGATTGATGATGGACA
AGCTGTTGATATTTAG
mRNA sequenceShow/hide mRNA sequence
atgggtagtcggaggaagaagaagcgtactgcggattcagaagagtcttcttcctcgtcaccgtcctcctccgatgattccgacagctcctctatgcggtcgcgccgcca
tcaccgcagtggcagttctagaagggagaaggacaaggaacgagagtcgaggattagagatagggagaggaagagaaaagataggaatagggagagagatagaaagagga
gaaagaagaaattgagaagggagagcaagagaaagagggatgattatggatctgagagtgataacgagtcctcccattcaggggattctgttgatagcaagtctgataga
cggaaggtgaagattattgagcctgaagtgattgtacgccagctgctgaaggaatttcctgatgttggaaatgacttaaaacagCTTCTCAAGATGATTGATGATGGACA
AGCTGTTGATATTTAG
Protein sequenceShow/hide protein sequence
MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDR
RKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI