; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G11460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G11460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionU6 snRNA phosphodiesterase
Genome locationClcChr09:10133054..10142964
RNA-Seq ExpressionClc09G11460
SyntenyClc09G11460
Gene Ontology termsGO:0034477 - U6 snRNA 3'-end processing (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:1990838 - poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (molecular function)
InterPro domainsIPR027521 - U6 snRNA phosphodiesterase Usb1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008467330.1 PREDICTED: U6 snRNA phosphodiesterase [Cucumis melo]1.5e-9190.37Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVYVPTNARKEVALF+KK+SSLVPALHLVDIDIPLD LC DDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS AWALGD+S++ SQAVHNE+K+SA+KE  KRCIFTTKFNGIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

XP_023536219.1 collagen alpha-2(I) chain-like [Cucurbita pepo subsp. pepo]7.0e-17466.53Show/hide
Query:  RVNGGLSGDVAGFGPVGTSRLLPKVNGGFSGDVAGFGPVGTSLLVPKVNGGLLGDFAGFGPVGTGSFIPRVNGGLSGDVAGFGPVGTSRFVPKVNGGLLG
        R NGG+SGDVAGFGPVGT  L+PK+ GG SGDV GFGPVGT LLVPK+ GGL GD AGFGPVGT  F+PR NGG+SGDVAGFGPVGT  FVP+ NGG+ G
Subjt:  RVNGGLSGDVAGFGPVGTSRLLPKVNGGFSGDVAGFGPVGTSLLVPKVNGGLLGDFAGFGPVGTGSFIPRVNGGLSGDVAGFGPVGTSRFVPKVNGGLLG

Query:  DVAGFWPVGTGSFVPRVNGGLSGDVAGFGPVGTSRLLPKVNGGFSGDVAGFGPVGTSLLVPKVNGGLLGDFAGFGPVGTGSFIPRVNGGLSGDVAGFGPV
        DVAGF PVGT  F+ R NGG+SGDVAGFGPVGT  L+PK+ GG SGDVAGFGPVGT LLVP+ NGG+ GD AGFGPVGT  F+PR NGG+SGDVAGFGPV
Subjt:  DVAGFWPVGTGSFVPRVNGGLSGDVAGFGPVGTSRLLPKVNGGFSGDVAGFGPVGTSLLVPKVNGGLLGDFAGFGPVGTGSFIPRVNGGLSGDVAGFGPV

Query:  GTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKVNGGLSRDVAGFGPIGTSHFVPKVNGGLSGDVAGFGPVGTSRFLPKANGGLSGDVAGFGPVGTSLLVPK
        GT   VP+ NGG+SGDVAGFGPVG              DVAGFGP+GT  FVP+ NGG+SGDVAGFGPVGT  F+P+ NGG+SGDVAGFGPVGT L    
Subjt:  GTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKVNGGLSRDVAGFGPIGTSHFVPKVNGGLSGDVAGFGPVGTSRFLPKANGGLSGDVAGFGPVGTSLLVPK

Query:  VNGGLLGDFAGFWPVGTGSFVPRVNGGLLGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKVNGELSGDVAGFGPVGTSRFLLKANGGLSGD
                           FVPR NGG+ GDVAGFGPVGT  FVP+ NGG+SGDVAGFGPVGT   VPK+ G LSGDV GFGPVGT   +   NGG+SGD
Subjt:  VNGGLLGDFAGFWPVGTGSFVPRVNGGLLGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKVNGELSGDVAGFGPVGTSRFLLKANGGLSGD

Query:  VAGFGPVGTSVLVPKVNGSVGTGNFVPRVNGGLSGDVAGFGPVGTSRFVPKDNGVLSGDVTGFGPVGTSLLRLKESTSPPSSVFASTLLRYDDTR-TKEN
        VAGFGPVGT +             FVPR NGG+SGDVAGFGPVGT   VP+ NG +SGDV GFG VGT LLR KEST P SS FAS  LR D    T+ N
Subjt:  VAGFGPVGTSVLVPKVNGSVGTGNFVPRVNGGLSGDVAGFGPVGTSRFVPKDNGVLSGDVTGFGPVGTSLLRLKESTSPPSSVFASTLLRYDDTR-TKEN

Query:  KK
        KK
Subjt:  KK

XP_023549871.1 U6 snRNA phosphodiesterase [Cucurbita pepo subsp. pepo]2.5e-9190.91Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVY+PTNARKEVALFLKK+S LVPALHLVDIDIPLD LC DDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEIIAGGLMEIRK IQ+VNEVYKLHNLPEFYKE RPHIS AWALGDLSKLLSQ+VH+EMKKS +KE  KRCIFT KFNGIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

XP_038875354.1 U6 snRNA phosphodiesterase isoform X1 [Benincasa hispida]4.6e-9392.51Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVYVPTN RKEVALFLKKVSSLVPALHLVDID+PLD LC DDHKLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEII GGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHIS AWA+GDLSKLLSQAVHNEMK SA+ +TLKRCIFTTKF GIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

XP_038875355.1 U6 snRNA phosphodiesterase isoform X2 [Benincasa hispida]4.6e-9392.51Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVYVPTN RKEVALFLKKVSSLVPALHLVDID+PLD LC DDHKLEQALAREFH+SLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEII GGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHIS AWA+GDLSKLLSQAVHNEMK SA+ +TLKRCIFTTKF GIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

TrEMBL top hitse value%identityAlignment
A0A0A0KPH5 U6 snRNA phosphodiesterase2.3e-9089.84Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVYVPTNARKEVALF+KK+SSLVPALHLVDIDIPLD LC DD KLEQA AREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS AWALGD+S+L SQAVHNE+K+SA+KE  KRCIFTTKFNGIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

A0A1S3CTB0 U6 snRNA phosphodiesterase7.2e-9290.37Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVYVPTNARKEVALF+KK+SSLVPALHLVDIDIPLD LC DDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQS RRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEII GGLMEIRKQIQ+VNEVYKLHNLPEFYKEARPHIS AWALGD+S++ SQAVHNE+K+SA+KE  KRCIFTTKFNGIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

A0A6J1DNL4 U6 snRNA phosphodiesterase8.0e-8383.42Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVY+PT ++KEV LFLKKVSSLVP+LHLVDID+PL  LC D+HKLEQALAREFHISLSRTVPIRVHQIDSIV+MLRQKLQ QRRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEIIAGGLMEIRKQIQ+VNEVYK HNLPEFYKE RPHIS AWALGDLSKLLS+ V ++MK+S++  + KRCIFTTKF+GIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

A0A6J1EQH7 U6 snRNA phosphodiesterase1.5e-8989.84Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVY+ TNARKEVALFLKK+S LVPALHLVDIDIPLD LC DDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEIIAGGLMEIRK IQ+VNEVYKLHNLPEFYKE RPHIS AWALGDLSKLLSQ+VH+EMKKS +KE  KR IFT KFNGIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

A0A6J1HYN3 U6 snRNA phosphodiesterase6.1e-9190.91Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PVY+PTNARKEVALFLKK+S LVPALHLVDIDIPLD LC DD KLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETF+NDDL
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        SRTFLSMEIIAGGLMEIRK+IQ+VNEVYKLHNLPEFYKEARPHIS AWALGDLSKLLSQ+VH+EMKKS +KE  KRCIFT KFNGIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

SwissProt top hitse value%identityAlignment
Q54W16 U6 snRNA phosphodiesterase5.5e-1231.08Show/hide
Query:  VPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSK-WETFINDDLSR
        VPT +R ++   +++V  +                  ++  ++Q     FHIS+SRT PIR H I++    L++ L++QR   I  SK    FIND+ SR
Subjt:  VPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSK-WETFINDDLSR

Query:  TFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWAL
         FLS+ I       I K I+ ++    L   P++Y    PH+S +W+L
Subjt:  TFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWAL

Q5I0I5 U6 snRNA phosphodiesterase1.5e-0929.31Show/hide
Query:  EFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALG
        EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G  +    +  V+ V K  +L  FY++   H+S AW +G
Subjt:  EFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALG

Query:  DLSKLLSQAVHNEMKK
        D    L      E+++
Subjt:  DLSKLLSQAVHNEMKK

Q6DEF6 U6 snRNA phosphodiesterase8.4e-1335.71Show/hide
Query:  HKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAG--GLMEIRKQIQIVNEVYKLHNLPEFYKEA
        H +   ++ EFH+SLS+TV +R H I   V  +R  L   ++++    K + + N + +RTFL ME+  G   L+E+ K   IV+E  K  NL  FY++ 
Subjt:  HKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAG--GLMEIRKQIQIVNEVYKLHNLPEFYKEA

Query:  RPHISFAWALGDLSKLLSQAVHNEMK
          HIS AW +GD ++ L +A   E++
Subjt:  RPHISFAWALGDLSKLLSQAVHNEMK

Q7ZYI9 U6 snRNA phosphodiesterase1.1e-0930.88Show/hide
Query:  EFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALG
        EFHIS S+TV +R H I+  V  L+ KL    R+     + + + N + +RTFL +E ++ G+  + + +  V+   +  NL  FY+E   H+S AW +G
Subjt:  EFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALG

Query:  DLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        D  + L  +   E++K  + +  +     T+FN  E
Subjt:  DLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

Q91W78 U6 snRNA phosphodiesterase1.1e-0930.25Show/hide
Query:  LAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAW
        L  EFH+SLS++V +R H I   V +L+ ++ S +R++   ++ + + N + +RTF+ +E ++ G  +    +  V+   K  +L  FY++   HIS AW
Subjt:  LAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAW

Query:  ALGDLSKLLSQAVHNEMKK
         +GD S  L      E+++
Subjt:  ALGDLSKLLSQAVHNEMKK

Arabidopsis top hitse value%identityAlignment
AT5G51170.1 unknown protein4.5e-6261.5Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PV +P   +KE+  FLKKV+S+VP LHLV+ D+PL  LC DD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE F+NDD 
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE
        +R+FLS+EI   GL EI KQI  VNEVYKLHNLPEFYK+ RPHIS  WALGD+   L  AV  E++K      ++  IFT+KF GIE
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIE

AT5G51170.2 unknown protein7.0e-3958.87Show/hide
Query:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL
        PV +P   +KE+  FLKKV+S+VP LHLV+ D+PL  LC DD K E+AL REFHISL R VP+RVHQI+S+++MLRQKLQ Q+RY IDF+KWE F+NDD 
Subjt:  PVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDL

Query:  SRTFLSMEIIAGGLMEIRKQIQIV
        +R+FLS+EI   GL E+  ++ ++
Subjt:  SRTFLSMEIIAGGLMEIRKQIQIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTTCCTGCTCTTCATCTTGTTGATATTGACATTCCTTT
GGACTTTTTATGTAACGATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTGCCAATCCGAGTACACCAAATTGACTCAATAG
TGACAATGCTTCGCCAGAAGCTTCAGTCTCAACGACGTTATTGGATTGATTTTAGTAAATGGGAGACTTTTATTAATGATGATCTCTCTCGAACCTTTTTGTCAATGGAA
ATTATTGCTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTGAATTTTACAAGGAAGCAAGACCACATATATC
TTTTGCATGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAAGCAGTTCATAATGAAATGAAGAAGTCTGCAATTAAGGAAACATTGAAGAGATGTATTTTCACCACCA
AATTCAACGGCATCGAATATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACGGTGCCAATCCAACTACATCAGATTGACTCAATA
ATGACAATGTTTTCCCAGAAGCTTCAGTCTCAAAGGCATTATTGGATTGATTTTAGCAAGGGGGAGACTTTTACTAACGATGATCTCTCTCAAACCTTTTTGCAAATGGA
AATTACTGCTGGAGGGCTAATGGAGAAATCCAAATCAAACTTGGTATCAAGAGAAGGTGTTGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGGGTAACTTCGTTCCAA
GAGTCAACGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGTCCGGTTGGAACAAGTCGCTTTGTGCCGAAAGATAATGGTGAACTTTCAGGAGATGTTGCTGGATTTGGG
TCGGTTGGGACGAGCCTCTTTGCGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTCTACCTAAAGCCAATGGAGG
GCTTTCAGGAGATGTTGCTGGATTTGGACCGGTTGGAACGAGTCTTTTGGTACCTAAAGTCAATGGAAGACTTTTAGGAGATCTCGCTAGATTTGGGCCAGTTGGGACAG
GTAACTTTGTTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTCCTGCCTAAAGTCAATGGAGGGTTTTCAGGAGAT
GTTGCTGGATTTGGGCCGGTTGGAACAAGTCTCTTGGTACCTAAAGTCAATGGAGGACTTTTAGGAGATTTTGCTGGATTTGGGCCAGTTGGGACAGGTAGCTTCATTCC
AAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGTCGGTTGGGACGAGCCTCTTTGCGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTG
GGCCAGTTGGAACGAGTCGCTTTCTACCTAAAGCCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACTAGTCTCTTGGTACCTAAAGTCAATGGA
GGACTTTTAGGAGATTTTGCTGGATTTTGGCCGGTTGGGACGGGTAGCTTCGTTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAAC
GAGTCGCTTACTGCCTAAAGTCAATGGAGGGTTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCTCTTGGTACCTAAAGTCAATGGAGGACTTTTAGGAG
ATTTTGCTGGATTTGGGCCAGTTGGGACAGGTAGCTTCATTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACTAGTCGTTTTGTG
CCTAAAGTCAATGGAGGACTTTTAGGAGATGTTGCTGGATTTTGGCCGGTTGGGACGGGTAGCTTCGTTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATT
TGGGCCAGTTGGAACGAGTCGCTTACTGCCTAAAGTCAATGGAGGGTTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCTCTTGGTACCTAAAGTCAATG
GAGGACTTTTAGGAGATTTTGCTGGATTTGGGCCAGTTGGGACAGGTAGCTTCATTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGA
ACTAGTCGTTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACGAGCCGTTTTGTGCCTAAAGTCAATGGAGGGCTTTCAAG
AGATGTTGCTGGATTTGGGCCGATTGGAACAAGTCATTTTGTGCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTC
TACCTAAAGCCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACTAGTCTCTTGGTACCTAAAGTCAATGGAGGACTTTTAGGAGATTTTGCTGGA
TTTTGGCCGGTTGGGACGGGTAGCTTCGTTCCAAGAGTCAATGGAGGACTTTTAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACTAGTCGTTTTGTGCCTAAAGTCAA
TGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGACCGGTTGGAACGAGTCGTTTTGTGCCTAAAGTCAATGGAGAGCTTTCAGGAGATGTTGCCGGATTTGGGCCAGTTG
GAACGAGCCGCTTCCTGCTTAAAGCCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACGAGTGTCTTGGTACCTAAAGTCAATGGGTCGGTTGGG
ACAGGTAACTTCGTTCCAAGAGTTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCCGTTGGAACAAGTCGTTTTGTGCCTAAAGATAATGGAGTACTTTCGGG
AGATGTTACTGGATTTGGTCCAGTTGGTACAAGTCTTTTGAGACTCAAAGAAAGTACATCACCCCCTTCATCTGTCTTTGCCTCCACACTACTTAGATATGATGACACAA
GAACAAAAGAAAACAAGAAGAATACACGAATCATATTGAAATTAAAAAGAAAAGTCATTTTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
CTGCCATTGACAGAGCAGAGAATGGATGCTCTAAGGGCTTCGTATGGCGGAAGCTCGTCGGATGAAGAAGCAGATACAGTTTCCCTTTCATCAGCATCATCATCAACTTT
AGCTTTAACTTCAACTTCAACGCCACAACTCTCCGATGAGACTGTGAGCTTTTCACCTCTGCCTCCGCCACCTCTCTCACTTCTCCATTTTCCAACTTCCACCTCTATTT
TGGATGATTTACCAATCGATCAGGCAACTAGGGTTCGAAGCTTCCCTCACGTTCAAGGAAACTATGCCTTACACCTCTATATCCCAGGTCATTCCCATATATCCTTTTTC
AATTGCATTCTTGATTTATGAGTTACCCTGGTATGTCAAAGCTATGTAGTTCATCTAATTTGATTCTTAATCCTACTTTTCCTATTTCCATTTTGATTCACCTAATGGGG
CTTCTTTGTTTTGTTATATATTTGGAAATACTTGTTAGTTGTAACAACTGTGATTCTGTTTATAGAGAGCTCTTCTTTGGTTGACCACTAATTCATTATTAACAAATAAG
TAGATTATTAGAGTCCAGATTGGAATCAATGTCTAAAAATAATTAATCATAATTCATAAACCTTGTTTTGTTTGGCTACTCGTACAACGTTGTCTTCTTGAAATATATGT
TGATTTCATTTTGGTTTGTGTCTCTCAACCCCTTAGCCTGCTATTTTGCCTCTTAAACATGATTATTAATACTTATCACTTGCTTGCATTTCATTACATCTATAATTTTG
CCTTTTATTGTGCTTATGGAATTCTAGATTATCATGACGGAACCAACGAAGAAAATCAATAATATCTATGATAATGTTTCAACAACACCTACAAATGTCAGAACATGGCT
ACTTTTATATTGTTGGGTTTTTGACTCTTGAATTGGAACTTTCTCTAAGCTTCTTTCGTCAATTCACTATATTTCATGGTCAATGCATCTACAATCTTCTAAATGTTCAT
ACTTGATGAGGAAAAGCAGTCAAAGTAGATATGACTTATTTAAAAGAAATATAATTTTTTTTTTGGTATATAAGTTTGTAGATTTCTCTATTAATTTATAATCAAAACAT
TAACAGAGATTCTGAACATCTACAAATTAAACATTCTCAAATACATGGTTCTAAATAGTTGTTGAGATTTTTTCATTTTATCTATGTAATACGACTTTTCACATTGTTTT
TTCATTTTGAACATCTATAAATATTTGTTTCATGTTCCCAGTGTATGTACCAACTAATGCAAGGAAGGAGGTGGCCTTGTTTTTGAAGAAAGTTTCCTCACTTGTTCCTG
CTCTTCATCTTGTTGATATTGACATTCCTTTGGACTTTTTATGTAACGATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACAGTG
CCAATCCGAGTACACCAAATTGACTCAATAGTGACAATGCTTCGCCAGAAGCTTCAGTCTCAACGACGTTATTGGATTGATTTTAGTAAATGGGAGACTTTTATTAATGA
TGATCTCTCTCGAACCTTTTTGTCAATGGAAATTATTGCTGGAGGGCTAATGGAGATCAGAAAACAAATCCAAATTGTTAATGAGGTTTATAAGCTCCACAATCTTCCTG
AATTTTACAAGGAAGCAAGACCACATATATCTTTTGCATGGGCATTAGGTGACCTTAGTAAATTATTGAGTCAAGCAGTTCATAATGAAATGAAGAAGTCTGCAATTAAG
GAAACATTGAAGAGATGTATTTTCACCACCAAATTCAACGGCATCGAATATGACCACAAGCTTGAGCAAGCATTGGCTAGAGAATTTCACATAAGTTTGTCAAGAACGGT
GCCAATCCAACTACATCAGATTGACTCAATAATGACAATGTTTTCCCAGAAGCTTCAGTCTCAAAGGCATTATTGGATTGATTTTAGCAAGGGGGAGACTTTTACTAACG
ATGATCTCTCTCAAACCTTTTTGCAAATGGAAATTACTGCTGGAGGGCTAATGGAGAAATCCAAATCAAACTTGGTATCAAGAGAAGGTGTTGGAGATGTTGCTGGATTT
GGGCCAGTTGGAACGGGTAACTTCGTTCCAAGAGTCAACGGAGGGCTTTCAGGAGATGTTGCTAGATTTGGTCCGGTTGGAACAAGTCGCTTTGTGCCGAAAGATAATGG
TGAACTTTCAGGAGATGTTGCTGGATTTGGGTCGGTTGGGACGAGCCTCTTTGCGCCCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAA
CGAGTCGCTTTCTACCTAAAGCCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGACCGGTTGGAACGAGTCTTTTGGTACCTAAAGTCAATGGAAGACTTTTAGGA
GATCTCGCTAGATTTGGGCCAGTTGGGACAGGTAACTTTGTTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTCCT
GCCTAAAGTCAATGGAGGGTTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCTCTTGGTACCTAAAGTCAATGGAGGACTTTTAGGAGATTTTGCTGGAT
TTGGGCCAGTTGGGACAGGTAGCTTCATTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGTCGGTTGGGACGAGCCTCTTTGCGCCCAAAGATAAT
GGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTCTACCTAAAGCCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGG
AACTAGTCTCTTGGTACCTAAAGTCAATGGAGGACTTTTAGGAGATTTTGCTGGATTTTGGCCGGTTGGGACGGGTAGCTTCGTTCCAAGAGTCAATGGAGGACTTTCAG
GAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTACTGCCTAAAGTCAATGGAGGGTTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCTCTTG
GTACCTAAAGTCAATGGAGGACTTTTAGGAGATTTTGCTGGATTTGGGCCAGTTGGGACAGGTAGCTTCATTCCAAGAGTCAATGGAGGACTTTCAGGAGATGTTGCTGG
ATTTGGGCCAGTTGGAACTAGTCGTTTTGTGCCTAAAGTCAATGGAGGACTTTTAGGAGATGTTGCTGGATTTTGGCCGGTTGGGACGGGTAGCTTCGTTCCAAGAGTCA
ATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTACTGCCTAAAGTCAATGGAGGGTTTTCAGGAGATGTTGCTGGATTTGGGCCGGTT
GGAACAAGTCTCTTGGTACCTAAAGTCAATGGAGGACTTTTAGGAGATTTTGCTGGATTTGGGCCAGTTGGGACAGGTAGCTTCATTCCAAGAGTCAATGGAGGACTTTC
AGGAGATGTTGCTGGATTTGGGCCAGTTGGAACTAGTCGTTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACGAGCCGTT
TTGTGCCTAAAGTCAATGGAGGGCTTTCAAGAGATGTTGCTGGATTTGGGCCGATTGGAACAAGTCATTTTGTGCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCT
GGATTTGGGCCAGTTGGAACGAGTCGCTTTCTACCTAAAGCCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACTAGTCTCTTGGTACCTAAAGT
CAATGGAGGACTTTTAGGAGATTTTGCTGGATTTTGGCCGGTTGGGACGGGTAGCTTCGTTCCAAGAGTCAATGGAGGACTTTTAGGAGATGTTGCTGGATTTGGGCCAG
TTGGAACTAGTCGTTTTGTGCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGACCGGTTGGAACGAGTCGTTTTGTGCCTAAAGTCAATGGAGAGCTT
TCAGGAGATGTTGCCGGATTTGGGCCAGTTGGAACGAGCCGCTTCCTGCTTAAAGCCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACGAGTGT
CTTGGTACCTAAAGTCAATGGGTCGGTTGGGACAGGTAACTTCGTTCCAAGAGTTAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCCGTTGGAACAAGTCGTT
TTGTGCCTAAAGATAATGGAGTACTTTCGGGAGATGTTACTGGATTTGGTCCAGTTGGTACAAGTCTTTTGAGACTCAAAGAAAGTACATCACCCCCTTCATCTGTCTTT
GCCTCCACACTACTTAGATATGATGACACAAGAACAAAAGAAAACAAGAAGAATACACGAATCATATTGAAATTAAAAAGAAAAGTCATTTTGTTTTAG
Protein sequenceShow/hide protein sequence
MFPVYVPTNARKEVALFLKKVSSLVPALHLVDIDIPLDFLCNDDHKLEQALAREFHISLSRTVPIRVHQIDSIVTMLRQKLQSQRRYWIDFSKWETFINDDLSRTFLSME
IIAGGLMEIRKQIQIVNEVYKLHNLPEFYKEARPHISFAWALGDLSKLLSQAVHNEMKKSAIKETLKRCIFTTKFNGIEYDHKLEQALAREFHISLSRTVPIQLHQIDSI
MTMFSQKLQSQRHYWIDFSKGETFTNDDLSQTFLQMEITAGGLMEKSKSNLVSREGVGDVAGFGPVGTGNFVPRVNGGLSGDVARFGPVGTSRFVPKDNGELSGDVAGFG
SVGTSLFAPKDNGGLSGDVAGFGPVGTSRFLPKANGGLSGDVAGFGPVGTSLLVPKVNGRLLGDLARFGPVGTGNFVPRVNGGLSGDVAGFGPVGTSRFLPKVNGGFSGD
VAGFGPVGTSLLVPKVNGGLLGDFAGFGPVGTGSFIPRVNGGLSGDVAGFGSVGTSLFAPKDNGGLSGDVAGFGPVGTSRFLPKANGGLSGDVAGFGPVGTSLLVPKVNG
GLLGDFAGFWPVGTGSFVPRVNGGLSGDVAGFGPVGTSRLLPKVNGGFSGDVAGFGPVGTSLLVPKVNGGLLGDFAGFGPVGTGSFIPRVNGGLSGDVAGFGPVGTSRFV
PKVNGGLLGDVAGFWPVGTGSFVPRVNGGLSGDVAGFGPVGTSRLLPKVNGGFSGDVAGFGPVGTSLLVPKVNGGLLGDFAGFGPVGTGSFIPRVNGGLSGDVAGFGPVG
TSRFVPKVNGGLSGDVAGFGPVGTSRFVPKVNGGLSRDVAGFGPIGTSHFVPKVNGGLSGDVAGFGPVGTSRFLPKANGGLSGDVAGFGPVGTSLLVPKVNGGLLGDFAG
FWPVGTGSFVPRVNGGLLGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFVPKVNGELSGDVAGFGPVGTSRFLLKANGGLSGDVAGFGPVGTSVLVPKVNGSVG
TGNFVPRVNGGLSGDVAGFGPVGTSRFVPKDNGVLSGDVTGFGPVGTSLLRLKESTSPPSSVFASTLLRYDDTRTKENKKNTRIILKLKRKVILF