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Clc09G12075 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G12075
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:10764844..10765116
RNA-Seq ExpressionClc09G12075
SyntenyClc09G12075
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039617 - CLAVATA3/ESR (CLE)-related protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061638.1 hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa]6.5e-2575Show/hide
Query:  NTKLAPLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
        N  LAPLMA+LFM MLV AA   HA+  PWT E   E  SSS  MIMRKFGYSKRQMEHLR+LSSS+TARYIPGGPDSQHHS PPRLP
Subjt:  NTKLAPLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
KAE8647339.1 hypothetical protein Csa_003556, partial [Cucumis sativus]5.7e-2173.75Show/hide
Query:  PLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPP
        PLMA+LFMAMLV AA   HA+   WT E   E  SSSS M+MRKFGYSKRQMEHLR+LSSS+T RYIPGGPDSQHHS PP
Subjt:  PLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPP
KAG6572409.1 hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1965.59Show/hide
Query:  NTKLAPLMAILFMAMLVAAAVGCHASPPWTEERKA------ESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
        N K APL A++FM MLV AA G HA P  TEE  A       S SSSS MIMR+ GY+K QMEHLR+LSSS TARYIPGGPDSQHHS  PR P
Subjt:  NTKLAPLMAILFMAMLVAAAVGCHASPPWTEERKA------ESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
KAG6589262.1 hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2471.26Show/hide
Query:  NTKLAPLMAILFMAMLVAAAVGCHASPPWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
        ++KLAP MA+LF+ ML+    G HA+PPWT E   E  SSSSIMIMRKFGYSK QMEHL++LSSS T RY PGGPDSQHHSHPPRLP
Subjt:  NTKLAPLMAILFMAMLVAAAVGCHASPPWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
TrEMBL top hitse value%identityAlignment
A0A0A0KGI4 Uncharacterized protein3.8e-2374.7Show/hide
Query:  PLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
        PLMA+LFMAMLV AA   HA+   WT E   E  SSSS M+MRKFGYSKRQMEHLR+LSSS+T RYIPGGPDSQHHS PPRLP
Subjt:  PLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
A0A5D3C664 Uncharacterized protein3.1e-2575Show/hide
Query:  NTKLAPLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
        N  LAPLMA+LFM MLV AA   HA+  PWT E   E  SSS  MIMRKFGYSKRQMEHLR+LSSS+TARYIPGGPDSQHHS PPRLP
Subjt:  NTKLAPLMAILFMAMLVAAAVGCHASP-PWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP
A0A7J9BSX3 Uncharacterized protein6.8e-0444.9Show/hide
Query:  SSIMIMRKFGYSKRQMEHLRKLSS--SNTARYIPGGPDSQHHSHPPRLP
        SS +++RK GY + ++EH R++ +  +++ R  PGGPD +HH+HPPR+P
Subjt:  SSIMIMRKFGYSKRQMEHLRKLSS--SNTARYIPGGPDSQHHSHPPRLP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCCAACACAAAACTTGCTCCATTAATGGCTATTCTTTTCATGGCGATGCTTGTCGCGGCGGCGGTTGGCTGCCATGCATCCCCGCCGTGGACGGAGGAGAGGAA
GGCTGAAAGCAGAAGCAGCAGCAGCATTATGATAATGCGTAAGTTTGGTTATAGCAAACGGCAAATGGAGCATTTAAGAAAACTTTCTTCTTCCAATACTGCAAGATATA
TTCCTGGAGGGCCTGATTCTCAACATCATTCCCACCCACCTCGTTTGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCCAACACAAAACTTGCTCCATTAATGGCTATTCTTTTCATGGCGATGCTTGTCGCGGCGGCGGTTGGCTGCCATGCATCCCCGCCGTGGACGGAGGAGAGGAA
GGCTGAAAGCAGAAGCAGCAGCAGCATTATGATAATGCGTAAGTTTGGTTATAGCAAACGGCAAATGGAGCATTTAAGAAAACTTTCTTCTTCCAATACTGCAAGATATA
TTCCTGGAGGGCCTGATTCTCAACATCATTCCCACCCACCTCGTTTGCCTTAG
Protein sequenceShow/hide protein sequence
MAPNTKLAPLMAILFMAMLVAAAVGCHASPPWTEERKAESRSSSSIMIMRKFGYSKRQMEHLRKLSSSNTARYIPGGPDSQHHSHPPRLP