; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G12140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G12140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr09:10802465..10803687
RNA-Seq ExpressionClc09G12140
SyntenyClc09G12140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041004.1 hypothetical protein E6C27_scaffold125G002220 [Cucumis melo var. makuwa]3.0e-1641.9Show/hide
Query:  MESLFTTELKAIKDMLMLIMKRRFVVHELVAGDQSVDDCKDTASPPAQDPTPIDSNSNDGKDTADPSIVPIDPWKIDNDVIPLSQPPNVVHKEMPTRKRR
        MES FT EL AIK++LM ++K   +       DQ+VDD         +  T I  +S D        I+P+D        I L +   V+ KE  TRKR 
Subjt:  MESLFTTELKAIKDMLMLIMKRRFVVHELVAGDQSVDDCKDTASPPAQDPTPIDSNSNDGKDTADPSIVPIDPWKIDNDVIPLSQPPNVVHKEMPTRKRR

Query:  APWKLRSSIMDQPAGKKRNKKVKPYNPMAKIPAKFEKQFYAYIVDP------RLIVMSIRRLLWFMNLLTSDTFIDDDV
           KL+SS++ Q  GKKR KKV+PYNP  KI AKF+KQF+AY++DP      R  V  +R L WF +LLT  TF +D+V
Subjt:  APWKLRSSIMDQPAGKKRNKKVKPYNPMAKIPAKFEKQFYAYIVDP------RLIVMSIRRLLWFMNLLTSDTFIDDDV
TrEMBL top hitse value%identityAlignment
A0A5A7U7N5 Uncharacterized protein8.4e-0427.63Show/hide
Query:  LESKLDRMESLFTTELKAIKDMLMLIMKRRFVVHELVAG------------DQSVDDCKDTASPPAQD--PTPIDSNSNDGKDTADPSIVPIDPWKIDND
        +++ + RM+S  + +L  IK +LM ++K + V  +   G            +  VDD       P  D  PT  ++ ++  +D  D  I  ID      D
Subjt:  LESKLDRMESLFTTELKAIKDMLMLIMKRRFVVHELVAG------------DQSVDDCKDTASPPAQD--PTPIDSNSNDGKDTADPSIVPIDPWKIDND

Query:  VIPLSQPPNVVHKEMPTR---KRRAPWKLRSSIMDQPAGKKRNKKVKPYNPMAKIPAKFEKQFYAYIVDPR------LIVMSIRRLLWFMNLLTSDTFID
        V P    P +  K  P     + + P+     +      KK+  + +      +IP KF+KQF AY+ DPR        V S R L WFM+LL+  TF+D
Subjt:  VIPLSQPPNVVHKEMPTR---KRRAPWKLRSSIMDQPAGKKRNKKVKPYNPMAKIPAKFEKQFYAYIVDPR------LIVMSIRRLLWFMNLLTSDTFID

Query:  DDV-SKVCGTSFSGSYSMMDTKGVEYVR
        +D+ SK C +     ++ +D   V ++R
Subjt:  DDV-SKVCGTSFSGSYSMMDTKGVEYVR
A0A5D3DA67 Uncharacterized protein1.5e-1641.9Show/hide
Query:  MESLFTTELKAIKDMLMLIMKRRFVVHELVAGDQSVDDCKDTASPPAQDPTPIDSNSNDGKDTADPSIVPIDPWKIDNDVIPLSQPPNVVHKEMPTRKRR
        MES FT EL AIK++LM ++K   +       DQ+VDD         +  T I  +S D        I+P+D        I L +   V+ KE  TRKR 
Subjt:  MESLFTTELKAIKDMLMLIMKRRFVVHELVAGDQSVDDCKDTASPPAQDPTPIDSNSNDGKDTADPSIVPIDPWKIDNDVIPLSQPPNVVHKEMPTRKRR

Query:  APWKLRSSIMDQPAGKKRNKKVKPYNPMAKIPAKFEKQFYAYIVDP------RLIVMSIRRLLWFMNLLTSDTFIDDDV
           KL+SS++ Q  GKKR KKV+PYNP  KI AKF+KQF+AY++DP      R  V  +R L WF +LLT  TF +D+V
Subjt:  APWKLRSSIMDQPAGKKRNKKVKPYNPMAKIPAKFEKQFYAYIVDP------RLIVMSIRRLLWFMNLLTSDTFIDDDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTGATCCATGATGAACAACAGGCGTACTTGAGCCATACGTTGGACCTTCCAATTGTGGATGGGTATGTAGAGCCTCCCCCTCGCCTACTAGAGAGCATTGTTCG
TGATACCATCTTGAGTGATGAGAGTGAGGAACGGGGGATTGGTGAAGATACGCATGCGGGTGGTCCTTTTACAGATTCTGATCCACTTGTGAGTGAGCCGCTTGTGACAC
GCCCAACTGAGATTGCCCCACCTACGAGGACGACATCTACTAGTTCTTGGACGACGTGTGATAGCAGGCAACACTTACAACGATTGGAGAGTAAATTGGATCGAATGGAG
TCCTTATTTACGACTGAGTTGAAGGCCATAAAGGACATGTTGATGCTGATAATGAAGAGAAGGTTCGTTGTTCATGAACTAGTTGCCGGAGATCAATCTGTTGACGATTG
CAAAGATACGGCTAGTCCACCTGCTCAGGATCCCACTCCCATTGACTCAAACTCAAACGATGGCAAAGATACGGCTGATCCATCCATCGTCCCTATAGATCCTTGGAAGA
TTGACAATGACGTCATTCCGTTGTCTCAACCTCCGAATGTGGTTCATAAGGAAATGCCCACGAGGAAGAGGAGAGCCCCATGGAAGCTTCGTAGTTCAATAATGGATCAA
CCGGCTGGGAAGAAGAGGAATAAAAAAGTGAAACCATATAATCCGATGGCTAAGATACCAGCCAAGTTTGAGAAGCAGTTCTATGCATATATTGTTGACCCTAGACTGAT
TGTTATGAGCATAAGGAGGCTGTTGTGGTTTATGAACTTGTTGACATCGGATACATTCATCGATGATGATGTAAGTAAAGTTTGTGGAACTTCGTTTTCAGGTTCATACT
CAATGATGGATACAAAGGGTGTGGAATATGTCAGGAAAAACCATAGCAATGGACTTTGCAATGCTTTTGTGTTGATTGGATATAAGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATTGATCCATGATGAACAACAGGCGTACTTGAGCCATACGTTGGACCTTCCAATTGTGGATGGGTATGTAGAGCCTCCCCCTCGCCTACTAGAGAGCATTGTTCG
TGATACCATCTTGAGTGATGAGAGTGAGGAACGGGGGATTGGTGAAGATACGCATGCGGGTGGTCCTTTTACAGATTCTGATCCACTTGTGAGTGAGCCGCTTGTGACAC
GCCCAACTGAGATTGCCCCACCTACGAGGACGACATCTACTAGTTCTTGGACGACGTGTGATAGCAGGCAACACTTACAACGATTGGAGAGTAAATTGGATCGAATGGAG
TCCTTATTTACGACTGAGTTGAAGGCCATAAAGGACATGTTGATGCTGATAATGAAGAGAAGGTTCGTTGTTCATGAACTAGTTGCCGGAGATCAATCTGTTGACGATTG
CAAAGATACGGCTAGTCCACCTGCTCAGGATCCCACTCCCATTGACTCAAACTCAAACGATGGCAAAGATACGGCTGATCCATCCATCGTCCCTATAGATCCTTGGAAGA
TTGACAATGACGTCATTCCGTTGTCTCAACCTCCGAATGTGGTTCATAAGGAAATGCCCACGAGGAAGAGGAGAGCCCCATGGAAGCTTCGTAGTTCAATAATGGATCAA
CCGGCTGGGAAGAAGAGGAATAAAAAAGTGAAACCATATAATCCGATGGCTAAGATACCAGCCAAGTTTGAGAAGCAGTTCTATGCATATATTGTTGACCCTAGACTGAT
TGTTATGAGCATAAGGAGGCTGTTGTGGTTTATGAACTTGTTGACATCGGATACATTCATCGATGATGATGTAAGTAAAGTTTGTGGAACTTCGTTTTCAGGTTCATACT
CAATGATGGATACAAAGGGTGTGGAATATGTCAGGAAAAACCATAGCAATGGACTTTGCAATGCTTTTGTGTTGATTGGATATAAGCATTAG
Protein sequenceShow/hide protein sequence
MSLIHDEQQAYLSHTLDLPIVDGYVEPPPRLLESIVRDTILSDESEERGIGEDTHAGGPFTDSDPLVSEPLVTRPTEIAPPTRTTSTSSWTTCDSRQHLQRLESKLDRME
SLFTTELKAIKDMLMLIMKRRFVVHELVAGDQSVDDCKDTASPPAQDPTPIDSNSNDGKDTADPSIVPIDPWKIDNDVIPLSQPPNVVHKEMPTRKRRAPWKLRSSIMDQ
PAGKKRNKKVKPYNPMAKIPAKFEKQFYAYIVDPRLIVMSIRRLLWFMNLLTSDTFIDDDVSKVCGTSFSGSYSMMDTKGVEYVRKNHSNGLCNAFVLIGYKH