CuGenDBv2

Gene ID	Clc09G12165
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	NADH-ubiquinone oxidoreductase chain 1
Genome location	ClcChr09:10832113..10832547
RNA-Seq Expression	Clc09G12165
Synteny	Clc09G12165
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0005739 - mitochondrion (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H

Homology

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GenBank top hits

e value

%identity

Alignment

GER38991.1 NADH-ubiquinone oxidoreductase chain 1 [Striga asiatica]

2.0e-19

86.36

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

KAF1856883.1 hypothetical protein Lal_00001785 [Lupinus albus]

2.0e-19

86.36

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

KAG4914234.1 hypothetical protein JHK87_051791 [Glycine soja]

2.0e-19

86.36

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

KAG8362761.1 hypothetical protein BUALT_BualtUnG0039900 [Buddleja alternifolia]

2.0e-19

86.36

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

QCD93700.1 NADH dehydrogenase I subunit 6 [Vigna unguiculata]

3.1e-20

87.88

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSFRLLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

TrEMBL top hits

e value

%identity

Alignment

A0A385G2B5 NADH-ubiquinone oxidoreductase chain 1

9.7e-20

86.36

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

A0A4D6LYR9 NADH dehydrogenase I subunit 6

1.5e-20

87.88

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSFRLLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

A0A5A7Q257 NADH-ubiquinone oxidoreductase chain 1

9.7e-20

86.36

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

A0A6A5LB92 Uncharacterized protein

9.7e-20

86.36

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDY

A0A6M8EI04 NADH-ubiquinone oxidoreductase chain 1

1.3e-19

82.86

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY I++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

SwissProt top hits

e value

%identity

Alignment

P26845 NADH-ubiquinone oxidoreductase chain 1

2.9e-13

62.12

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMA---TFMLVLVARVVVPFDY
        MA +QRRKGP+VVG   LLQPLADGLKL++ EP  PS+AN  +F MA   TF L L A  V+PFDY
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMA---TFMLVLVARVVVPFDY

P31839 NADH-ubiquinone oxidoreductase chain 1

6.5e-21

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVA  VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

P92558 NADH-ubiquinone oxidoreductase chain 1

3.2e-20

78.57

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANF LFRM   ATFML LVA  VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

Q01148 NADH-ubiquinone oxidoreductase chain 1

3.2e-20

78.57

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANF LFRM   ATFML LVA  VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

Q01300 NADH-ubiquinone oxidoreductase chain 1

7.7e-22

81.43

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

Arabidopsis top hits

e value

%identity

Alignment

AT2G07785.1 NADH dehydrogenase family protein

1.3e-21

78.57

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

ATCG01100.1 NADH dehydrogenase family protein

9.7e-04

35.06

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Query:  AFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMA---TFMLVLVARVVVPF-DYVILIVVQIPYF
        A +Q+R GP+  G   +LQ LADG KL+  E   PS  N  LF +      + +L++  V+PF ++++L  + I  F
Subjt:  AFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMA---TFMLVLVARVVVPF-DYVILIVVQIPYF

ATMG00516.1 NADH dehydrogenase 1C

1.3e-21

78.57

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

ATMG01120.1 NADH dehydrogenase 1B

1.3e-21

78.57

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

ATMG01275.1 NADH dehydrogenase 1A

1.3e-21

78.57

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Query:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI
        MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR VVPFDY +++
Subjt:  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARVVVPFDYVILI

Sequences

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CDS sequence

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ATGGCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCAGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAATAGAACCTTTTTCACCAAG
TAATGCAAATTTCTCCCTTTTTAGAATGGCTACATTTATGTTAGTTTTGGTCGCTCGGGTCGTTGTACCTTTTGATTATGTAATTCTTATAGTGGTTCAGATTCCCTACT
TCACTCCTCAAGACTACTTAGGTATTTTACTGCAAGGATTGTTTGGCCCAAGGAGTTGGAAAGTAGAAGTGGGGAAGTAA

mRNA sequence

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Protein sequence

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MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMATFMLVLVARVVVPFDYVILIVVQIPYFTPQDYLGILLQGLFGPRSWKVEVGK

Clc09G12165 (gene) of Watermelon (cordophanus) v2 genome