CuGenDBv2

Gene ID	Clc09G12480
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	GTPase
Genome location	ClcChr09:11378060..11382499
RNA-Seq Expression	Clc09G12480
Synteny	Clc09G12480
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571645.1 hypothetical protein SDJN03_28373, partial [Cucurbita argyrosperma subsp. sororia]

5.0e-78

72.59

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRL++P HPRIR+FL  RTRA+FDVT+K H+TI+ +DIKV R + SWIS+WLN+ KPSA  H+HP+ T N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KMIK+VSNSY+KHRAS RA IGQK D+Y+   SSVH WPK  FPTI MIMRQRKPAGT+NQHRQFSIC S+G+KTNYRR  F+HGI++D++QWM+RN
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

XP_004136200.1 uncharacterized protein LOC101212537 [Cucumis sativus]

1.2e-87

81.22

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALAT YFLGLKR FKLALKTQRR+++P +PRIRQFLRGRTRAVFDVTVKVHQTI+RQDIKV+R L SWISRWLN+ KPSAET EHP+ +IN GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KM+KKVSNSYLKHRAS RA IGQKFDQY+ S SSVHRWPKPFFPTI MIMRQRKP G + QHRQFSICGS GLKTN RRR FDHGI+ED+ QWM++N
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

XP_008466006.1 PREDICTED: uncharacterized protein LOC103503568 [Cucumis melo]

2.2e-89

83.76

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALAT YFLGLKRTFKL LKTQRRL++P +PRIRQFLRGRTRAVFDVTVKVHQTIQRQDIK DR LGSWISRWLN+ KPSAET EHPN T+N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KMIKKVSNSYLKHRAS RA IGQKFDQY+ S SSVHRWPKPFFPTI MIMRQRKPAG + QHRQFSI GS GLKTN RRR FDHGI+ED+ QWM++N
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

XP_022963557.1 uncharacterized protein LOC111463851 [Cucurbita moschata]

6.5e-78

72.59

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRL++P HPRIR+FL  RTRA+FDVT+K H+TI+ +DIKV R + SWIS+WLN+ KPSA  H+HP+ T N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KMIK+VSNSY+KHRAS RA IGQK D+Y+   SSVH WPK  FPTI MIMRQRKPAGT+NQHRQFSIC S+G+KTNYRR  F+HGI++D++QWM+RN
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

XP_038888705.1 uncharacterized protein LOC120078506 [Benincasa hispida]

1.0e-94

86.8

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALATAYFLGLKRTFKLALKTQRRL++P HPRIRQFLRGRTRAVFDV+VKVH TIQRQDIKV   L SWISRWLNQMKPSAETHEHPN TIN GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KMIKKVSNSYLKH+ S RA IG+KFDQY+ S SSVHRWPKPFFPTI MIMRQRKPAGTLNQ+RQFSICGSDGLKTNYRRR FDHGI+ED+ QWML+N
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH53 Uncharacterized protein

5.7e-88

81.22

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALAT YFLGLKR FKLALKTQRR+++P +PRIRQFLRGRTRAVFDVTVKVHQTI+RQDIKV+R L SWISRWLN+ KPSAET EHP+ +IN GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KM+KKVSNSYLKHRAS RA IGQKFDQY+ S SSVHRWPKPFFPTI MIMRQRKP G + QHRQFSICGS GLKTN RRR FDHGI+ED+ QWM++N
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

A0A1S3CRP2 uncharacterized protein LOC103503568

1.0e-89

83.76

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALAT YFLGLKRTFKL LKTQRRL++P +PRIRQFLRGRTRAVFDVTVKVHQTIQRQDIK DR LGSWISRWLN+ KPSAET EHPN T+N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KMIKKVSNSYLKHRAS RA IGQKFDQY+ S SSVHRWPKPFFPTI MIMRQRKPAG + QHRQFSI GS GLKTN RRR FDHGI+ED+ QWM++N
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

A0A6J1DZV3 uncharacterized protein LOC111025863 isoform X1

1.7e-71

70.56

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEI LATAYFLGLKRT+KLALK QRRL++P HPRIRQFLRGRTR++FDV VKVHQ +Q QDI+V +  G+ I +WLNQMKPSAE  EH +  I  GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KMIK+VSNSYLKHRAS RA I QKFDQYM   SS+ RWPKP FPT  MIMRQ KPAGT  Q+RQ+SICGS+ ++TNYRR  FD  I+ED+ QWMLR+
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

A0A6J1HFJ9 uncharacterized protein LOC111463851

3.1e-78

72.59

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRL++P HPRIR+FL  RTRA+FDVT+K H+TI+ +DIKV R + SWIS+WLN+ KPSA  H+HP+ T N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN
        KMIK+VSNSY+KHRAS RA IGQK D+Y+   SSVH WPK  FPTI MIMRQRKPAGT+NQHRQFSIC S+G+KTNYRR  F+HGI++D++QWM+RN
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

A0A6J1HU73 uncharacterized protein LOC111466890

9.1e-78

72.96

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWEIALATAYFLGLKRTFKL LKTQRRL++P HPRIR+FL  RTRA+FDVT+K H+TIQ +DIKV   + SWIS+WLN+MKPSA  H+HP+ T N GM
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLR
        KMIK+VSNSY+KHRAS RA IGQK D+Y+   SSVHRWPK  FPTI MI RQRKPAGT+NQHRQFSIC S+G+KTNYRR  F+HGI++D++QWM+R
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

8.6e-36

40.69

Show/hide

Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MV WEI L TAYFLGL+RT++LALK QRRL+ P HP+IRQFL  RTR +FDV + VH+ IQ +DI+V R LG+WI RWL++MKP+A+    P    N   
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYL----KHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHG------IQEDV
         M K    + L     H  + +    ++ D+++ + S  H   KP FP++ M+++  +P GT  Q+R +    S GL  +  +  +  G      +++D+
Subjt:  KMIKKVSNSYL----KHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHG------IQEDV

Query:  RQWM
         QWM
Subjt:  RQWM

AT2G35480.1 unknown protein

2.8e-34

38.78

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Query:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM
        MVLWE+AL TAYFLG++RT++LALKTQRRL++P HPRIR F+  RT  +FD+ ++VH+ IQ++D+ + R LG+WI R L++MKPSA+     N   +I  
Subjt:  MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGM

Query:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLR
        K  + + ++ LK   + +    ++ D+ +  +    R   P      M+++  +  GT  Q+R +S+  S  +K  Y R  F+  I++D+ QWM++
Subjt:  KMIKKVSNSYLKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLR

Sequences

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CDS sequence

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ATGGTGTTATGGGAGATTGCATTGGCAACAGCCTATTTCTTAGGCCTCAAACGAACCTTTAAGCTCGCTCTCAAGACTCAACGACGTCTTATTGCCCCCACACACCCTCG
GATTCGTCAATTTCTTCGCGGACGAACCCGTGCCGTGTTTGATGTTACTGTGAAAGTTCATCAGACCATTCAGCGTCAAGACATAAAAGTTGACAGAACTCTTGGTAGCT
GGATTTCGCGATGGCTTAATCAAATGAAACCATCTGCTGAGACTCATGAACATCCCAATGACACCATCAACATAGGCATGAAAATGATAAAGAAGGTTTCCAACTCTTAC
TTGAAACATCGAGCCAGCTGTCGAGCAGAGATTGGTCAAAAATTCGATCAATATATGTTATCTAATTCATCAGTACACAGATGGCCTAAGCCCTTCTTCCCTACCATTGG
AATGATCATGAGGCAGAGAAAGCCTGCTGGGACTTTGAATCAACACAGACAATTTAGCATTTGTGGCTCTGATGGATTGAAAACAAACTACAGAAGACGATGTTTCGATC
ATGGGATTCAAGAAGATGTTAGGCAATGGATGCTCCGAAATTAG

mRNA sequence

Show/hide mRNA sequence

GTGTGGAAATTATTAGGGAAAGAAACACGGTCCTTATCGACAGTAAATTGGGCCATTGTTGTGTGTTGGGCCTTTAAAGCCCATTTTCGACACAGTTTCACGTTTGAGAT
TGAAAGGAATTTTTTTTTTTGCTTACATTTCTTAAACCGAAGAAGAAGAAGAAGATGATGAAGAAGCAGAAGAAGAGAAGCAAAGCGAGTGAAAATGGTGTTATGGGAGA
TTGCATTGGCAACAGCCTATTTCTTAGGCCTCAAACGAACCTTTAAGCTCGCTCTCAAGACTCAACGACGTCTTATTGCCCCCACACACCCTCGGATTCGTCAATTTCTT
CGCGGACGAACCCGTGCCGTGTTTGATGTTACTGTGAAAGTTCATCAGACCATTCAGCGTCAAGACATAAAAGTTGACAGAACTCTTGGTAGCTGGATTTCGCGATGGCT
TAATCAAATGAAACCATCTGCTGAGACTCATGAACATCCCAATGACACCATCAACATAGGCATGAAAATGATAAAGAAGGTTTCCAACTCTTACTTGAAACATCGAGCCA
GCTGTCGAGCAGAGATTGGTCAAAAATTCGATCAATATATGTTATCTAATTCATCAGTACACAGATGGCCTAAGCCCTTCTTCCCTACCATTGGAATGATCATGAGGCAG
AGAAAGCCTGCTGGGACTTTGAATCAACACAGACAATTTAGCATTTGTGGCTCTGATGGATTGAAAACAAACTACAGAAGACGATGTTTCGATCATGGGATTCAAGAAGA
TGTTAGGCAATGGATGCTCCGAAATTAGAAGGGAAGATTTTTTTGTAGTTGTCTTCTCCTTGGAGACTAGATTGTTCGGGTTACAATACAGTCTATAGTGCAGTGTTCAG
TTTCCAATTTTGAGCTTGGAGACAACAGAGAGGTTTTCTTTTCTTGTTTTAAAATGTTTCGAACATGTTCTTGGAAGTCATGTCTTTGCTTTTGAATAATTTCTAGAGGC
AATGTTTAATTCTTAAATACTTGCATTTTAGAT

Protein sequence

Show/hide protein sequence

MVLWEIALATAYFLGLKRTFKLALKTQRRLIAPTHPRIRQFLRGRTRAVFDVTVKVHQTIQRQDIKVDRTLGSWISRWLNQMKPSAETHEHPNDTINIGMKMIKKVSNSY
LKHRASCRAEIGQKFDQYMLSNSSVHRWPKPFFPTIGMIMRQRKPAGTLNQHRQFSICGSDGLKTNYRRRCFDHGIQEDVRQWMLRN

Clc09G12480 (gene) of Watermelon (cordophanus) v2 genome