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Clc09G12780 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G12780
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionFAM50A-like protein
Genome locationClcChr09:12086054..12086575
RNA-Seq ExpressionClc09G12780
SyntenyClc09G12780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571667.1 hypothetical protein SDJN03_28395, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7082.08Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        ME VQN+HVAE ESSFPMKL D+EK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS +K PTQTGTYFQPNG+ NNPL+RVHC+RNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        +SRGLEEASCNSSNMAA++STSE Q+ C PS+ +PQ ET SHSEPPTE+L+SETAKKVLGRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
XP_022155993.1 uncharacterized protein LOC111022965 [Momordica charantia]4.0e-7183.82Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        MENVQN+ V ET+ SFPMKL+D+ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS VKQPTQTGTYFQPNGI NNPL+RVHCTRNWKK+ARS +
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        +SRGL EASCNSSNMAARTSTSESQ+ C+PSN +PQLET SH EPP E+LIS+TAKKVLGRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
XP_022963572.1 uncharacterized protein LOC111463869 [Cucurbita moschata]1.5e-7082.08Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        ME VQN+HVAE ESSFPMKL D+EK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS +K PTQTGTYFQPNG+ NNPL+RVHC+RNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        +SRGLEEASCNSSNMAA++STSE Q+ C PS+ +PQ ET SHSEPPTE+L+SETAKKVLGRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
XP_022967395.1 uncharacterized protein LOC111466937 [Cucurbita maxima]4.0e-7182.66Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        ME VQN+HVAE ESSFPMKL D+EK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS +K PTQTGTYFQPNG+ NNPL+RVHC+RNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        +SRGLEEASCNSSNMAA++STSE Q+ C PSN +PQ ET SHSEPPTE+L+SETAKKVLGRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
XP_038886879.1 uncharacterized protein LOC120077088 [Benincasa hispida]3.1e-7691.23Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        MENVQNQHVA TE SFPMKLM++EKD+RI+NDIMTRRLKNRERQRRYRARKRLEEEI+KAS +KQP QTGTYFQPNG  NNPLSRVHC+RNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKK
        ISRGLEEASCNSSNMAARTSTSESQL CIPSNVDPQLETPSHSEPPTE LISETAKKVLGRRNWKADARKK
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKK
TrEMBL top hitse value%identityAlignment
A0A0A0LK46 Uncharacterized protein3.4e-6880.92Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        ME+VQNQHV           MD++KD+RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS  KQP QTGTYFQPNGI NNPL+RVHC+RNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        ISRG+EE SCNSSNMAA+TSTSESQL C+PSNVDPQLETPSHS+ P E+L+SETAKKV GRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
A0A1S3CQ53 uncharacterized protein LOC1035035452.0e-6881.5Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        ME+VQNQHV           MD++K +RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASI KQP QTGTYFQPNGI NNPL+RVHC+RNWKKEARSAN
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        ISRG+EEASCNSSNMAARTSTSESQL C+PSNVDPQLETPSHS+ P ++L+SETAKKV GRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
A0A6J1DPD8 uncharacterized protein LOC1110229651.9e-7183.82Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        MENVQN+ V ET+ SFPMKL+D+ KD RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS VKQPTQTGTYFQPNGI NNPL+RVHCTRNWKK+ARS +
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        +SRGL EASCNSSNMAARTSTSESQ+ C+PSN +PQLET SH EPP E+LIS+TAKKVLGRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
A0A6J1HFL3 uncharacterized protein LOC1114638697.3e-7182.08Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        ME VQN+HVAE ESSFPMKL D+EK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS +K PTQTGTYFQPNG+ NNPL+RVHC+RNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        +SRGLEEASCNSSNMAA++STSE Q+ C PS+ +PQ ET SHSEPPTE+L+SETAKKVLGRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
A0A6J1HUC8 uncharacterized protein LOC1114669371.9e-7182.66Show/hide
Query:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN
        ME VQN+HVAE ESSFPMKL D+EK  RIDNDIMTRRLKNRERQRRYRARKRLEEEIKKAS +K PTQTGTYFQPNG+ NNPL+RVHC+RNWKKEAR+A+
Subjt:  MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSAN

Query:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
        +SRGLEEASCNSSNMAA++STSE Q+ C PSN +PQ ET SHSEPPTE+L+SETAKKVLGRRNWKADARKK N
Subjt:  ISRGLEEASCNSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32630.1 unknown protein4.9e-1146.6Show/hide
Query:  EKDSRIDND-IMTRRLKNRERQRRYRARKRLEEE-------IKKASIVKQPTQ----TGTYFQ-PNGIVNNPLSRVHCTRNWKKEARSAN-ISRGLEEAS
        EK+  ID D +M RR+KNRERQRRYRARKR+ EE       +   ++ KQ  +     G  F  P+G V N + RV+C RNWKKEAR A+ I    +++S
Subjt:  EKDSRIDND-IMTRRLKNRERQRRYRARKRLEEE-------IKKASIVKQPTQ----TGTYFQ-PNGIVNNPLSRVHCTRNWKKEARSAN-ISRGLEEAS

Query:  CNS
        C S
Subjt:  CNS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGTGCAAAACCAGCACGTTGCTGAAACAGAAAGTAGTTTCCCGATGAAGCTCATGGATCGAGAAAAAGACAGTAGAATAGACAATGATATCATGACTCGTCG
ACTGAAGAATCGAGAAAGGCAACGCAGGTATAGAGCCCGGAAGCGTCTAGAAGAAGAAATAAAGAAGGCTTCAATCGTAAAACAACCAACTCAGACCGGAACATATTTTC
AACCAAATGGCATTGTAAACAATCCCTTGAGTCGGGTGCATTGTACCCGAAATTGGAAGAAGGAAGCAAGAAGTGCCAATATATCAAGGGGGTTAGAAGAAGCCTCTTGT
AATAGTTCCAATATGGCTGCAAGAACATCAACCAGTGAGAGTCAACTGCATTGCATACCCTCTAACGTAGATCCACAATTAGAAACACCATCACACTCGGAGCCACCTAC
CGAACGGCTCATCTCTGAAACAGCGAAAAAGGTGCTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAAAAGACGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGTGCAAAACCAGCACGTTGCTGAAACAGAAAGTAGTTTCCCGATGAAGCTCATGGATCGAGAAAAAGACAGTAGAATAGACAATGATATCATGACTCGTCG
ACTGAAGAATCGAGAAAGGCAACGCAGGTATAGAGCCCGGAAGCGTCTAGAAGAAGAAATAAAGAAGGCTTCAATCGTAAAACAACCAACTCAGACCGGAACATATTTTC
AACCAAATGGCATTGTAAACAATCCCTTGAGTCGGGTGCATTGTACCCGAAATTGGAAGAAGGAAGCAAGAAGTGCCAATATATCAAGGGGGTTAGAAGAAGCCTCTTGT
AATAGTTCCAATATGGCTGCAAGAACATCAACCAGTGAGAGTCAACTGCATTGCATACCCTCTAACGTAGATCCACAATTAGAAACACCATCACACTCGGAGCCACCTAC
CGAACGGCTCATCTCTGAAACAGCGAAAAAGGTGCTTGGTCGAAGAAATTGGAAAGCAGATGCGAGAAAAAAGACGAATTGA
Protein sequenceShow/hide protein sequence
MENVQNQHVAETESSFPMKLMDREKDSRIDNDIMTRRLKNRERQRRYRARKRLEEEIKKASIVKQPTQTGTYFQPNGIVNNPLSRVHCTRNWKKEARSANISRGLEEASC
NSSNMAARTSTSESQLHCIPSNVDPQLETPSHSEPPTERLISETAKKVLGRRNWKADARKKTN