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Clc09G13410 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G13410
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein Ycf2-like
Genome locationClcChr09:13812735..13815805
RNA-Seq ExpressionClc09G13410
SyntenyClc09G13410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032264.1 hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa]3.8e-4560.59Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGI T+IG  +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK +LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

KAA0036929.1 hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa]8.5e-4560.59Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGIAT+IG  +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQ LEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

KAA0067880.1 hypothetical protein E6C27_scaffold138G00340 [Cucumis melo var. makuwa]1.9e-4460.12Show/hide
Query:  KVQNGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLR
        K  NGIAT+I   +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR
Subjt:  KVQNGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLR

Query:  EEFQEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        +E QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P+EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  EEFQEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

TYJ96590.1 hypothetical protein E5676_scaffold1278G00080 [Cucumis melo var. makuwa]1.3e-4561.18Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGIAT+IG  +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

TYK15460.1 hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa]1.4e-4460.59Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGIAT+IG  + RI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

TrEMBL top hitse value%identityAlignment
A0A5A7SM53 Uncharacterized protein1.8e-4560.59Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGI T+IG  +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK +LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

A0A5A7T6C2 Uncharacterized protein4.1e-4560.59Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGIAT+IG  +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQ LEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

A0A5A7VKZ2 Uncharacterized protein9.1e-4560.12Show/hide
Query:  KVQNGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLR
        K  NGIAT+I   +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR
Subjt:  KVQNGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLR

Query:  EEFQEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        +E QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P+EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  EEFQEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

A0A5D3B9P7 Uncharacterized protein6.3e-4661.18Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGIAT+IG  +PRI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

A0A5D3CVR6 Uncharacterized protein7.0e-4560.59Show/hide
Query:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF
        NGIAT+IG  + RI+NWK +QQP WT LQ  YFKSSD  VIP TPT DEL S N+Q+FLN+ PN+V KE +EE EDE+ +   ++E +N +  K+LR+E 
Subjt:  NGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDL-VIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNKQENKTLREEF

Query:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD
        QEVK++LE+LK T+EN  NEV+ LLNNI+ +I +R+P EKQSQ S+HEN+APT++LQRLEERMNI+NL D
Subjt:  QEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAGATCAAAGAAGGCGGCTCTACTACTAGACCCTCTATTTTGGATGGAACAAACTACTTAGACTGGAAAGCTCGTATGACTGTCGTTTTGAAATCTATTAACAA
ATCGAGATGGTGCCGTGACGCTAAGGTACAACGTCGCGGCACTATTGTGAATTACGCACGACAATCACTTCGGACTGCTGCGGCGCTCAAGGTAGTGTCACGATGCCATG
GGCCTTTCACCATATCCATCCTCTCGGGAAAAAGCGCCATTGCACCAGAACTTTTGGGGCATTTTGATATTGCCAATGAATTGTTTTCTCTTAGGGAGAAAATATCAGAG
GAAAGACTTGAACACAAGTCTGTTGGACACTTGACGTTATCCCAAAACTTTCTAAAAGTCCAAAATGGAATAGCCACAAAAATTGGAGATGGAACCCCAAGAATCCTAAA
TTGGAAATCTGACCAGCAGCCTGATTGGACATGCCTACAGGAAACTTACTTCAAATCAAGTGATTTAGTTATCCCTATCACTCCAACTGATGATGAACTAAACTCTGTAA
ATTATCAATACTTCCTTAATGAACCACCAAATCAAGTTGTGAAAGAGGCTAATGAGGAAAAAGAAGATGAGAGTGTTGAAGCTCAAAAAAAAGATGAAAATTTAAACAAA
CAGGAAAACAAAACATTAAGAGAAGAATTTCAAGAAGTGAAAGAAGAGTTGGAGAACTTGAAGAAAACTATGGAAAATAGAGCAAATGAAGTCATGAGATTGCTGAACAA
CATCATGAATGTAATTATTAAGAGAATACCAATGGAAAAACAATCTCAAGACTCATTTCATGAAAATAATGCTCCCACAGTCAATCTACAGCGTCTTGAGGAAAGAATGA
ACATTTATAACTTGCATGATGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGAGATCAAAGAAGGCGGCTCTACTACTAGACCCTCTATTTTGGATGGAACAAACTACTTAGACTGGAAAGCTCGTATGACTGTCGTTTTGAAATCTATTAACAA
ATCGAGATGGTGCCGTGACGCTAAGGTACAACGTCGCGGCACTATTGTGAATTACGCACGACAATCACTTCGGACTGCTGCGGCGCTCAAGGTAGTGTCACGATGCCATG
GGCCTTTCACCATATCCATCCTCTCGGGAAAAAGCGCCATTGCACCAGAACTTTTGGGGCATTTTGATATTGCCAATGAATTGTTTTCTCTTAGGGAGAAAATATCAGAG
GAAAGACTTGAACACAAGTCTGTTGGACACTTGACGTTATCCCAAAACTTTCTAAAAGTCCAAAATGGAATAGCCACAAAAATTGGAGATGGAACCCCAAGAATCCTAAA
TTGGAAATCTGACCAGCAGCCTGATTGGACATGCCTACAGGAAACTTACTTCAAATCAAGTGATTTAGTTATCCCTATCACTCCAACTGATGATGAACTAAACTCTGTAA
ATTATCAATACTTCCTTAATGAACCACCAAATCAAGTTGTGAAAGAGGCTAATGAGGAAAAAGAAGATGAGAGTGTTGAAGCTCAAAAAAAAGATGAAAATTTAAACAAA
CAGGAAAACAAAACATTAAGAGAAGAATTTCAAGAAGTGAAAGAAGAGTTGGAGAACTTGAAGAAAACTATGGAAAATAGAGCAAATGAAGTCATGAGATTGCTGAACAA
CATCATGAATGTAATTATTAAGAGAATACCAATGGAAAAACAATCTCAAGACTCATTTCATGAAAATAATGCTCCCACAGTCAATCTACAGCGTCTTGAGGAAAGAATGA
ACATTTATAACTTGCATGATGGATAG
Protein sequenceShow/hide protein sequence
MNEIKEGGSTTRPSILDGTNYLDWKARMTVVLKSINKSRWCRDAKVQRRGTIVNYARQSLRTAAALKVVSRCHGPFTISILSGKSAIAPELLGHFDIANELFSLREKISE
ERLEHKSVGHLTLSQNFLKVQNGIATKIGDGTPRILNWKSDQQPDWTCLQETYFKSSDLVIPITPTDDELNSVNYQYFLNEPPNQVVKEANEEKEDESVEAQKKDENLNK
QENKTLREEFQEVKEELENLKKTMENRANEVMRLLNNIMNVIIKRIPMEKQSQDSFHENNAPTVNLQRLEERMNIYNLHDG