CuGenDBv2

Gene ID	Clc09G13434
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	clavaminate synthase-like protein At3g21360
Genome location	ClcChr09:13938066..13938640
RNA-Seq Expression	Clc09G13434
Synteny	Clc09G13434
Gene Ontology terms	GO:0016491 - oxidoreductase activity (molecular function)
InterPro domains	IPR042098 - Taurine dioxygenase TauD-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579699.1 Protein CHUP1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-26

72.62

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGY+VS  EEFN+IVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

XP_008467203.1 PREDICTED: clavaminate synthase-like protein At3g21360 [Cucumis melo]

9.3e-28

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  EEFNDIVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

XP_022969958.1 clavaminate synthase-like protein At3g21360 [Cucurbita maxima]

2.7e-27

73.81

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  EEFN+IVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

XP_023551299.1 clavaminate synthase-like protein At3g21360 [Cucurbita pepo subsp. pepo]

7.9e-27

72.62

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  +EFN+IVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

XP_038875558.1 clavaminate synthase-like protein At3g21360 [Benincasa hispida]

9.3e-28

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  EEFNDIVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV15 TauD domain-containing protein

8.5e-27

71.43

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  +EFNDIVE FGWEDIRYVGPAPR+H+YKRIWT N GPL EFIY+HHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

A0A1S3CUA2 clavaminate synthase-like protein At3g21360

4.5e-28

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  EEFNDIVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

A0A5D3BQA2 Clavaminate synthase-like protein

4.5e-28

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  EEFNDIVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

A0A6J1ELV8 clavaminate synthase-like protein At3g21360

6.5e-27

72.62

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGY+VS  EEFN+IVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

A0A6J1I2G0 clavaminate synthase-like protein At3g21360

1.3e-27

73.81

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE
        MIIKH+ +LLRGYDVS  EEFN+IVEAFGWEDIRYVGPAPR+H+YKRIWT N GPL EFIYYHHEMVL +  +  RV  + YCE
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCE

SwissProt top hits

e value

%identity

Alignment

Q9LIG0 Clavaminate synthase-like protein At3g21360

1.2e-09

36.67

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYV-GPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCEYCGEC
        ++ +   +L RG+ V++ ++FND+VEAFG++++ YV G APR+ V  R++T N  P  + I +HHEM   +  F +++ +  YCE   +C
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYV-GPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCEYCGEC

Arabidopsis top hits

e value

%identity

Alignment

AT3G21360.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

8.5e-11

36.67

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Query:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYV-GPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCEYCGEC
        ++ +   +L RG+ V++ ++FND+VEAFG++++ YV G APR+ V  R++T N  P  + I +HHEM   +  F +++ +  YCE   +C
Subjt:  MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYV-GPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCEYCGEC

Sequences

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CDS sequence

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ATGATCATCAAACATAACACCCTTTTGCTCCGAGGATATGACGTGTCAAACACCGAGGAGTTCAACGACATCGTCGAAGCTTTTGGGTGGGAAGACATTCGATACGTTGG
CCCAGCTCCTCGATCCCATGTTTATAAGAGGATTTGGACTACCAATGGAGGACCCCTCTTTGAGTTCATTTACTACCACCATGAGATGGTTTTGTATTTAAGCACTTTTT
TGGCTAGAGTTAATTATCTCCAATATTGTGAATATTGTGGTGAATGTTTGTTCATTGGGAGGAGAGCGGCAACCCTTTTAGTCGGTTGTGGAATCCTTACATTGGTATCA
AAGCTTGTTAGAAATAATGGGGAGGTGGAAGAAGATGGTCTGAAGAGGAGGCATGGAGGAGAATGGAGATGGTAG

mRNA sequence

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Protein sequence

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MIIKHNTLLLRGYDVSNTEEFNDIVEAFGWEDIRYVGPAPRSHVYKRIWTTNGGPLFEFIYYHHEMVLYLSTFLARVNYLQYCEYCGECLFIGRRAATLLVGCGILTLVS
KLVRNNGEVEEDGLKRRHGGEWRW

Clc09G13434 (gene) of Watermelon (cordophanus) v2 genome