CuGenDBv2

Gene ID	Clc09G13460
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	PH domain-containing protein
Genome location	ClcChr09:14131459..14135320
RNA-Seq Expression	Clc09G13460
Synteny	Clc09G13460
Gene Ontology terms	GO:0006623 - protein targeting to vacuole (biological process) GO:0045053 - protein retention in Golgi apparatus (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0019898 - extrinsic component of membrane (cellular component)
InterPro domains	IPR031646 - Vacuolar protein sorting-associated protein 13, second N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8651464.1 hypothetical protein Csa_002584 [Cucumis sativus]

3.6e-80

83.91

Show/hide

Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWEDL PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRP VSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

TYK31119.1 uncharacterized protein E5676_scaffold455G003970 [Cucumis melo var. makuwa]

3.6e-80

83.91

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Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWE L PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRPHVSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

XP_008465914.1 PREDICTED: uncharacterized protein LOC103503494 isoform X1 [Cucumis melo]

3.6e-80

83.91

Show/hide

Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWE L PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRPHVSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

XP_008465915.1 PREDICTED: uncharacterized protein LOC103503494 isoform X2 [Cucumis melo]

3.6e-80

83.91

Show/hide

Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWE L PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRPHVSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

XP_011652678.1 uncharacterized protein LOC101212417 [Cucumis sativus]

3.6e-80

83.91

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Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWEDL PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRP VSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LF94 Uncharacterized protein

5.1e-80

84.8

Show/hide

Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWEDL PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKG
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRP VSVKTDP SWWKYAFNSISDQLKKG
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKG

A0A1S3CPY5 uncharacterized protein LOC103503494 isoform X1

1.7e-80

83.91

Show/hide

Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWE L PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRPHVSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

A0A1S3CQB7 uncharacterized protein LOC103503494 isoform X2

1.7e-80

83.91

Show/hide

Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWE L PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRPHVSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

A0A5D3E5L1 Uncharacterized protein

1.7e-80

83.91

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Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D DG+ +T++  G       FVEL+QLAVYLDCD+SPWY+DKPWE L PSEWDKVFRFGTKNGKPAEGL KKH YILQPVSGYARYTKLRENDLADS E
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        PLQKASVYLDDVTLCLSKNGYRDILKL+DNFAAFNQRLKYAHYRPHVSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

A0A6J1IE12 uncharacterized protein LOC111471811

5.1e-80

93.46

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Query:  FVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKASVYLDDVTLCLSKNGY
        FVEL+QLAVYLDCD+SPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEG  KKHSYILQPVSGYARYTKLREND ADSREPLQKASVYLDDVTLCLSKNGY
Subjt:  FVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKASVYLDDVTLCLSKNGY

Query:  RDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE
        RDILKLVDNF+AFNQRLKYAH+RPHVSVKTDP SWWKYAFNSISDQLKKGS +
Subjt:  RDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGSSE

SwissProt top hits

e value

%identity

Alignment

Q55EI3 Putative vacuolar protein sorting-associated protein 13E

5.0e-08

28.45

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Query:  PAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKA-------SVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWK
        P +     H YILQP+SG+ +     ++  + ++E +  +       S+ L  + L L    YRD+L L+  +  + + L+Y  +RPH  VK +   WW 
Subjt:  PAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKA-------SVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWK

Query:  YAFNSISDQLKKGSSE
        +AF SI    +   +E
Subjt:  YAFNSISDQLKKGSSE

Arabidopsis top hits

e value

%identity

Alignment

AT1G48090.1 calcium-dependent lipid-binding family protein

2.6e-20

31.21

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Query:  VELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTK---NGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKASVYLDDVTLCLSKN
        ++L +LA+Y D +  PW ++K W+++ P EW ++F  G K     K     A    Y+L P++G  +Y +L   +  +   P ++ASV L+DV + +++ 
Subjt:  VELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTK---NGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKASVYLDDVTLCLSKN

Query:  GYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYA
         Y D +KLV+  + +   ++ +H RP V V   P  WW++A
Subjt:  GYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYA

AT4G17140.1 pleckstrin homology (PH) domain-containing protein

1.4e-58

60.47

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Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D  G+ +T++  G        VEL +LA YLD DMSPW++DKPWE L P EWD++FR+GTK+GKPA+ L +KH YILQPVSG A+Y+K + N+ +++ +
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGS
        PLQKA V LDDVTLCLSK GYRD++KL DNFAAFNQRLKYAHYRP V VK D  SWWKYA+  +S+Q+K  S
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGS

AT4G17140.2 pleckstrin homology (PH) domain-containing protein

1.4e-58

60.47

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Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D  G+ +T++  G        VEL +LA YLD DMSPW++DKPWE L P EWD++FR+GTK+GKPA+ L +KH YILQPVSG A+Y+K + N+ +++ +
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGS
        PLQKA V LDDVTLCLSK GYRD++KL DNFAAFNQRLKYAHYRP V VK D  SWWKYA+  +S+Q+K  S
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGS

AT4G17140.3 pleckstrin homology (PH) domain-containing protein

1.4e-58

60.47

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Query:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE
        +D  G+ +T++  G        VEL +LA YLD DMSPW++DKPWE L P EWD++FR+GTK+GKPA+ L +KH YILQPVSG A+Y+K + N+ +++ +
Subjt:  LDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWDKVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSRE

Query:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGS
        PLQKA V LDDVTLCLSK GYRD++KL DNFAAFNQRLKYAHYRP V VK D  SWWKYA+  +S+Q+K  S
Subjt:  PLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSISDQLKKGS

Sequences

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CDS sequence

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ATGAATTTACCATTTCCGAACCAAGTGCAGGAGAAGGAGTTACTGATTTTACAGCTAACTACTTCCATATTCAAACTCAAAAGAGGAAAGGGGACAATCAATGCCGAAGA
TAGAGCTTGTGTGGCAGGGGATAAATTGCCGAACCGAAGAACAGGTGTTGGAGGTCTTCTTGATCATGATGGCAGAGGGGACACATATGTGGGGATGGGCCTCCCATTGT
ATACTAATATTTTCGTTGAACTCAGCCAGTTAGCAGTTTATCTTGACTGTGATATGTCACCTTGGTATATGGATAAACCGTGGGAGGATTTGCTTCCATCAGAGTGGGAC
AAAGTATTTCGTTTTGGTACCAAGAATGGGAAACCGGCTGAAGGTCTTGCTAAGAAACACAGCTATATCTTGCAACCGGTGTCTGGATATGCAAGGTATACAAAGTTGCG
GGAAAATGATCTTGCAGATAGCCGTGAACCTCTACAGAAAGCATCAGTATATTTGGATGATGTGACACTCTGTTTGTCAAAGAATGGGTATAGGGATATTCTAAAGTTGG
TTGATAATTTTGCTGCATTCAATCAGCGATTGAAGTATGCTCATTATCGGCCTCATGTTTCTGTGAAAACTGATCCTGGTTCCTGGTGGAAGTATGCTTTTAATTCAATT
TCTGACCAGTTGAAGAAGGGAAGTAGTGAAGAGTTAGAAAGTTATGGGGAAGAAGTTATTCAAGAATTCACAGAGCAAGTTGACAACTTTGCAGAGGAGCTTAATTCTAT
GTTTCAGATCGAAGAAGGAAAACAAACAGAAGAGGGTTGGAATTCTTGTCTTAAGCCACTGCCTCAGTCGGAGATTCTTGCACATCTAAAGTCCATAATTGCAGATTGTA
GACTTGTTATGGGATAA

mRNA sequence

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Protein sequence

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MNLPFPNQVQEKELLILQLTTSIFKLKRGKGTINAEDRACVAGDKLPNRRTGVGGLLDHDGRGDTYVGMGLPLYTNIFVELSQLAVYLDCDMSPWYMDKPWEDLLPSEWD
KVFRFGTKNGKPAEGLAKKHSYILQPVSGYARYTKLRENDLADSREPLQKASVYLDDVTLCLSKNGYRDILKLVDNFAAFNQRLKYAHYRPHVSVKTDPGSWWKYAFNSI
SDQLKKGSSEELESYGEEVIQEFTEQVDNFAEELNSMFQIEEGKQTEEGWNSCLKPLPQSEILAHLKSIIADCRLVMG

Clc09G13460 (gene) of Watermelon (cordophanus) v2 genome