; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc09G13470 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc09G13470
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionhigh mobility group B protein 9
Genome locationClcChr09:14140209..14143315
RNA-Seq ExpressionClc09G13470
SyntenyClc09G13470
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001606 - ARID DNA-binding domain
IPR009071 - High mobility group box domain
IPR036431 - ARID DNA-binding domain superfamily
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024129.1 High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-13080.59Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTKS NGGLDK YPPP  TH+EV+SDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVG VFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL---------------------------
        KHYLSLLYHYEQVYLF RQGP+   QAPFSFGSPTSEN+LALVEY PKTT  SPGPPAEVTGTIDGKF  GYL                           
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL---------------------------

Query:  -STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
          TNAIVPYTG  HR+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERYKRELKEYK
Subjt:  -STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

XP_004145526.1 high mobility group B protein 9 [Cucumis sativus]6.2e-13481.91Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTK+WNGGLDKHYPP   TH+EVISDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------
        KHYLSLLYHYEQVYLFGRQGP+ V QAPF FGSPTSEN+LALVEYTPKTT  SPGPP+EVTGTIDGKF  GY                            
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------

Query:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
        LSTNAIVPYTGGR+R+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERY+RELKEYK
Subjt:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

XP_008452910.1 PREDICTED: high mobility group B protein 9 [Cucumis melo]3.9e-13682.89Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTK+WNGGLDKHYPPP  TH+EVISDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------
        KHYLSLLYHYEQVYLFGRQGP+ V QAPFSFGSPTSEN+LALVEYTPKTT  SPGPP+EVTGTIDGKF  GY                            
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------

Query:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
        LSTNAIVPYTGGRHR+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERY+RELKEYK
Subjt:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

XP_022975460.1 high mobility group B protein 9 isoform X2 [Cucurbita maxima]5.8e-13281.25Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTKS NGG+DK YPPP  TH+EV+SDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL---------------------------
        KHYLSLLYHYEQVYLF RQGP++  QAPFSFGSPTSEN+LALVEYTPKTT  SPGPPAEVTGTIDGKF  GYL                           
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL---------------------------

Query:  -STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
          TNAIVPYTG RHR+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERYKRELKEYK
Subjt:  -STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

XP_038899499.1 high mobility group B protein 9-like [Benincasa hispida]2.1e-13482.57Show/hide
Query:  TKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLRK
        TKSWNGGLDKHYPPP  TH+EVISDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLRK
Subjt:  TKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLRK

Query:  HYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL----------------------------
        HYLSLLYHYEQVYLFGRQGP+ V QAPF  GSPTSEN+LALVEYTPKTT  SPGPPAEVTGTIDGKF  GYL                            
Subjt:  HYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL----------------------------

Query:  STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKE
        STNAIVPYTGGR+R+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEER VYQNIGLKDKERYKRELKEYKE
Subjt:  STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKE

Query:  KMRQ
        KMRQ
Subjt:  KMRQ

TrEMBL top hitse value%identityAlignment
A0A0A0L181 Uncharacterized protein3.0e-13481.91Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTK+WNGGLDKHYPP   TH+EVISDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------
        KHYLSLLYHYEQVYLFGRQGP+ V QAPF FGSPTSEN+LALVEYTPKTT  SPGPP+EVTGTIDGKF  GY                            
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------

Query:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
        LSTNAIVPYTGGR+R+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERY+RELKEYK
Subjt:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

A0A1S3BUE9 high mobility group B protein 91.9e-13682.89Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTK+WNGGLDKHYPPP  TH+EVISDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------
        KHYLSLLYHYEQVYLFGRQGP+ V QAPFSFGSPTSEN+LALVEYTPKTT  SPGPP+EVTGTIDGKF  GY                            
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------

Query:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
        LSTNAIVPYTGGRHR+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERY+RELKEYK
Subjt:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

A0A5A7VAK3 High mobility group B protein 91.9e-13682.89Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTK+WNGGLDKHYPPP  TH+EVISDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------
        KHYLSLLYHYEQVYLFGRQGP+ V QAPFSFGSPTSEN+LALVEYTPKTT  SPGPP+EVTGTIDGKF  GY                            
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------

Query:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
        LSTNAIVPYTGGRHR+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERY+RELKEYK
Subjt:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

A0A6J1IGS2 high mobility group B protein 9 isoform X22.8e-13281.25Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTKS NGG+DK YPPP  TH+EV+SDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL---------------------------
        KHYLSLLYHYEQVYLF RQGP++  QAPFSFGSPTSEN+LALVEYTPKTT  SPGPPAEVTGTIDGKF  GYL                           
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYL---------------------------

Query:  -STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
          TNAIVPYTG RHR+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERYKRELKEYK
Subjt:  -STNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

E5GCD0 High mobility group family1.9e-13682.89Show/hide
Query:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR
        RTK+WNGGLDKHYPPP  TH+EVISDPIVFWDTLR FHFMMNTKFMIPVIGGKELDLHVLYSEVTRR GH KVVAEKKWREVGSVFKFSPTTTSASFVLR
Subjt:  RTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLR

Query:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------
        KHYLSLLYHYEQVYLFGRQGP+ V QAPFSFGSPTSEN+LALVEYTPKTT  SPGPP+EVTGTIDGKF  GY                            
Subjt:  KHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGY----------------------------

Query:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
        LSTNAIVPYTGGRHR+SGRRH   R+KGDPNH KPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGES NNLSPEERMVYQNIGLKDKERY+RELKEYK
Subjt:  LSTNAIVPYTGGRHRYSGRRH---RKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Query:  EKMR
        EKMR
Subjt:  EKMR

SwissProt top hitse value%identityAlignment
Q68CP9 AT-rich interactive domain-containing protein 23.7e-1243.96Show/hide
Query:  IVFWDTLRHFHFMMNTKF-MIPVIGGKELDLHVLYSEVTRRGHVKVVAEK-KWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG
        + F D LR FH    + F  IP +GGKELDLH LY+ VT  G    V+EK +W E+   F F  + ++A+F L+++YL  L  YE+V+ FG
Subjt:  IVFWDTLRHFHFMMNTKF-MIPVIGGKELDLHVLYSEVTRRGHVKVVAEK-KWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFG

Q9LG02 Putative high mobility group B protein 111.2e-3133.58Show/hide
Query:  HNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQ
        + +++ +P +FW+ LR FH   + KF IP++GGK LDLH L++EVT RG + KV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F   
Subjt:  HNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQ

Query:  GPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSP--GPPAEVTGTIDGKFYWGYLSTNAI-------VPYTGGRHRYSGRRHRKKGDPNHAKP---NRS
              QAP S      +    L+E +      S    P   +TG IDGKF  GYL +  +       + Y        G++  K    +  KP    R+
Subjt:  GPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSP--GPPAEVTGTIDGKFYWGYLSTNAI-------VPYTGGRHRYSGRRHRKKGDPNHAKP---NRS

Query:  GYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQQ
        GYNFF AE+  ++K+    ++    K  G    NLS  +R VY     +D +RYK E+ +Y+  M  +
Subjt:  GYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQQ

Q9LTT3 High mobility group B protein 105.4e-4038.93Show/hide
Query:  PTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLF
        P  +++++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RG + +VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY  
Subjt:  PTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLF

Query:  GRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYLSTNAI-----------VPYTGGRHRY-----------SGRRHR
          + PV  LQ+     +  +   LA     P+  +  P    EV G IDGKF  GYL T  +           +P T  + +            S RRHR
Subjt:  GRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGKFYWGYLSTNAI-----------VPYTGGRHRY-----------SGRRHR

Query:  KKG-----DPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK
        KK      D    K +RSGYNFFFAE++ +LK  Y  +ER  TK IG   +NL+  E+ VYQ+ G+KD ERY+ E+ EYK
Subjt:  KKG-----DPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYK

Q9MAT6 High mobility group B protein 151.4e-5136.47Show/hide
Query:  PPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
        P  T+  V++DP +F  +L   H ++ TKFM+P+IGG++LDLH L+ EVT RG + K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y 
Subjt:  PPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL

Query:  FGRQG--PVFVLQAP-----FSFGSPTSENKLALVEYTPKTTLCSPG------PPAEVTGTIDGKFYWGYLST---------------------------
        F   G  P   +Q+P     F  G+     +L  + +TP+  + +          + V G IDGKF  GYL T                           
Subjt:  FGRQG--PVFVLQAP-----FSFGSPTSENKLALVEYTPKTTLCSPG------PPAEVTGTIDGKFYWGYLST---------------------------

Query:  --NAIVPYT-----------GG---RHRYSGRRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKE
          + ++P T           GG   R R   +   K+ DP+H KPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE  N L+ +E+++YQ   ++DKE
Subjt:  --NAIVPYT-----------GG---RHRYSGRRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQ-------QPMLMELTIQNMGVAEEE
        RY+ E+++Y+EK +         P+   L  QN+ +AE +
Subjt:  RYKRELKEYKEKMRQ-------QPMLMELTIQNMGVAEEE

Q9SGS2 High mobility group B protein 91.2e-8458.75Show/hide
Query:  KHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP P   H  V+ D  VFWDTLR FH +M+TKFMIPVIGGKELDLHVLY EVTRR G+ KVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKT-TLCSPGPPAE------VTGTIDGKFYWGYL-----------------------------S
        EQV+LF  +GP+    A F   +P++  ++ALVEYTP +    +  PP++        GTI+GKF  GYL                              
Subjt:  EQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKT-TLCSPGPPAE------VTGTIDGKFYWGYL-----------------------------S

Query:  TNAIVPY--TGGRHRYSG--RRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKE
         NA+VPY  TG R R  G  RR R++ DPN+ KPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGES +NLS EERMVYQ+IGLKDKERY+REL EY+E
Subjt:  TNAIVPY--TGGRHRYSG--RRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKE

Query:  KMR
         +R
Subjt:  KMR

Arabidopsis top hitse value%identityAlignment
AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain9.8e-5336.47Show/hide
Query:  PPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
        P  T+  V++DP +F  +L   H ++ TKFM+P+IGG++LDLH L+ EVT RG + K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y 
Subjt:  PPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGHV-KVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL

Query:  FGRQG--PVFVLQAP-----FSFGSPTSENKLALVEYTPKTTLCSPG------PPAEVTGTIDGKFYWGYLST---------------------------
        F   G  P   +Q+P     F  G+     +L  + +TP+  + +          + V G IDGKF  GYL T                           
Subjt:  FGRQG--PVFVLQAP-----FSFGSPTSENKLALVEYTPKTTLCSPG------PPAEVTGTIDGKFYWGYLST---------------------------

Query:  --NAIVPYT-----------GG---RHRYSGRRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKE
          + ++P T           GG   R R   +   K+ DP+H KPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE  N L+ +E+++YQ   ++DKE
Subjt:  --NAIVPYT-----------GG---RHRYSGRRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKE

Query:  RYKRELKEYKEKMRQ-------QPMLMELTIQNMGVAEEE
        RY+ E+++Y+EK +         P+   L  QN+ +AE +
Subjt:  RYKRELKEYKEKMRQ-------QPMLMELTIQNMGVAEEE

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain8.8e-8658.75Show/hide
Query:  KHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP P   H  V+ D  VFWDTLR FH +M+TKFMIPVIGGKELDLHVLY EVTRR G+ KVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELDLHVLYSEVTRR-GHVKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKT-TLCSPGPPAE------VTGTIDGKFYWGYL-----------------------------S
        EQV+LF  +GP+    A F   +P++  ++ALVEYTP +    +  PP++        GTI+GKF  GYL                              
Subjt:  EQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKT-TLCSPGPPAE------VTGTIDGKFYWGYL-----------------------------S

Query:  TNAIVPY--TGGRHRYSG--RRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKE
         NA+VPY  TG R R  G  RR R++ DPN+ KPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGES +NLS EERMVYQ+IGLKDKERY+REL EY+E
Subjt:  TNAIVPY--TGGRHRYSG--RRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKE

Query:  KMR
         +R
Subjt:  KMR

AT4G17140.1 pleckstrin homology (PH) domain-containing protein2.6e-6957.66Show/hide
Query:  KEKMRQQPMLMELTIQNMGVAEEEENSAV-----------FRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQF-FSQEDWEQLNKFIG
        K  + Q   L++  I  + V ++EE  A+           +RMLAHKFV++SV+++ Y KK +AK SWWPFG  ++    E E   F+ EDWE+LNK IG
Subjt:  KEKMRQQPMLMELTIQNMGVAEEEENSAV-----------FRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQF-FSQEDWEQLNKFIG

Query:  YKEDENSLSIINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDT
        YKE +   SIIN  K D L T LEV M R+ASKL D  + CLAELSCE LNCS+K FPETK+ DI LG Y+LSSPSGLLA SA    S++ +FCYKPFD 
Subjt:  YKEDENSLSIINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDT

Query:  KVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVLETAAALQ
        KVDWSLV KASPCYMTYLKD+I+ IV+FFESSTAV QT+ LETAAA+Q
Subjt:  KVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVLETAAALQ

AT4G17140.2 pleckstrin homology (PH) domain-containing protein2.6e-6957.66Show/hide
Query:  KEKMRQQPMLMELTIQNMGVAEEEENSAV-----------FRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQF-FSQEDWEQLNKFIG
        K  + Q   L++  I  + V ++EE  A+           +RMLAHKFV++SV+++ Y KK +AK SWWPFG  ++    E E   F+ EDWE+LNK IG
Subjt:  KEKMRQQPMLMELTIQNMGVAEEEENSAV-----------FRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQF-FSQEDWEQLNKFIG

Query:  YKEDENSLSIINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDT
        YKE +   SIIN  K D L T LEV M R+ASKL D  + CLAELSCE LNCS+K FPETK+ DI LG Y+LSSPSGLLA SA    S++ +FCYKPFD 
Subjt:  YKEDENSLSIINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDT

Query:  KVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVLETAAALQ
        KVDWSLV KASPCYMTYLKD+I+ IV+FFESSTAV QT+ LETAAA+Q
Subjt:  KVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVLETAAALQ

AT4G17140.3 pleckstrin homology (PH) domain-containing protein2.6e-6957.66Show/hide
Query:  KEKMRQQPMLMELTIQNMGVAEEEENSAV-----------FRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQF-FSQEDWEQLNKFIG
        K  + Q   L++  I  + V ++EE  A+           +RMLAHKFV++SV+++ Y KK +AK SWWPFG  ++    E E   F+ EDWE+LNK IG
Subjt:  KEKMRQQPMLMELTIQNMGVAEEEENSAV-----------FRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQF-FSQEDWEQLNKFIG

Query:  YKEDENSLSIINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDT
        YKE +   SIIN  K D L T LEV M R+ASKL D  + CLAELSCE LNCS+K FPETK+ DI LG Y+LSSPSGLLA SA    S++ +FCYKPFD 
Subjt:  YKEDENSLSIINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDT

Query:  KVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVLETAAALQ
        KVDWSLV KASPCYMTYLKD+I+ IV+FFESSTAV QT+ LETAAA+Q
Subjt:  KVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVLETAAALQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATGGGAGCAGGTTCTGAAGTTTGCCAACTTACGCAAGAGATATATCTCTTTGTATGCTTCGTTGCTTAAATCTGATCCTACACGTGCAATTGTTAATGATGACAA
ACATATTGAGGAACTTGATCGTGAACTTGATATTGAGCTCATTCTTCAATGGAGGACCAAAAGCTGGAACGGCGGCCTTGATAAACACTATCCTCCGCCACCCACCACCC
ACAATGAAGTTATTTCCGACCCCATTGTTTTTTGGGACACGTTGAGGCATTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGAC
TTGCATGTTTTATATTCAGAAGTCACAAGAAGAGGACATGTAAAGGTTGTTGCAGAGAAGAAATGGAGAGAAGTTGGAAGTGTGTTTAAGTTTTCTCCTACAACAACGAG
TGCTTCATTTGTATTGAGAAAACATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTACTTGTTTGGCCGGCAGGGCCCCGTCTTTGTCCTTCAAGCGCCATTTTCTT
TTGGTAGCCCTACCAGTGAAAACAAATTGGCTCTTGTGGAATATACCCCCAAAACTACGTTGTGTTCGCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAA
TTCTACTGGGGTTACCTGTCTACCAATGCCATTGTACCGTATACCGGCGGCAGACATCGATATTCTGGTAGGCGGCACCGGAAAAAGGGAGATCCAAACCACGCAAAACC
AAACAGAAGTGGGTATAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAAAGGGAGTTCACTAAGATGATTGGAGAGTCTTGTAACA
ATCTTAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGGTTGAAAGACAAGGAAAGATACAAGCGAGAGTTGAAAGAGTATAAGGAGAAAATGAGGCAGCAACCAATG
TTGATGGAGCTAACTATTCAAAACATGGGAGTAGCAGAGGAGGAAGAGAATTCAGCGGTTTTTAGGATGCTCGCTCACAAGTTTGTTCAAAAGTCGGTGGAATCTGATCA
GTACTTGAAGAAAGCAAAAGCAAAAAAATCTTGGTGGCCATTTGGATGGAACAATCAATCATTCAAAGATGAAGAAGAACAATTTTTTAGCCAAGAAGACTGGGAACAAC
TGAACAAATTTATAGGGTACAAGGAAGATGAAAATTCACTGTCCATCATAAACGTTGGCAAAGTGGACACTCTTCTTACTTCTTTGGAGGTTCACATGAACCGTAATGCT
TCAAAGCTTACGGATGAGGCTCAACATTGTCTTGCTGAACTGTCATGTGAAGACCTTAATTGTTCCATGAAATTTTTTCCAGAAACGAAAGTTTTTGATATCAATTTGGG
GTCATATCAACTATCTTCTCCAAGTGGTCTCCTTGCTGTGAGTGCTGCTGTTCATGATTCATTGGTTGGTATCTTCTGTTACAAGCCATTTGATACTAAAGTGGACTGGA
GCTTGGTTGTGAAGGCTTCTCCTTGTTACATGACTTATCTCAAAGATGCCATTGAACAAATTGTGAGCTTCTTTGAGAGCAGCACTGCTGTTGGTCAGACCGTGGTGTTG
GAAACAGCAGCTGCCTTACAGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACATGGGAGCAGGTTCTGAAGTTTGCCAACTTACGCAAGAGATATATCTCTTTGTATGCTTCGTTGCTTAAATCTGATCCTACACGTGCAATTGTTAATGATGACAA
ACATATTGAGGAACTTGATCGTGAACTTGATATTGAGCTCATTCTTCAATGGAGGACCAAAAGCTGGAACGGCGGCCTTGATAAACACTATCCTCCGCCACCCACCACCC
ACAATGAAGTTATTTCCGACCCCATTGTTTTTTGGGACACGTTGAGGCATTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGAC
TTGCATGTTTTATATTCAGAAGTCACAAGAAGAGGACATGTAAAGGTTGTTGCAGAGAAGAAATGGAGAGAAGTTGGAAGTGTGTTTAAGTTTTCTCCTACAACAACGAG
TGCTTCATTTGTATTGAGAAAACATTATCTAAGTCTTCTTTACCATTACGAGCAAGTTTACTTGTTTGGCCGGCAGGGCCCCGTCTTTGTCCTTCAAGCGCCATTTTCTT
TTGGTAGCCCTACCAGTGAAAACAAATTGGCTCTTGTGGAATATACCCCCAAAACTACGTTGTGTTCGCCTGGTCCGCCTGCTGAAGTTACTGGAACAATTGATGGGAAA
TTCTACTGGGGTTACCTGTCTACCAATGCCATTGTACCGTATACCGGCGGCAGACATCGATATTCTGGTAGGCGGCACCGGAAAAAGGGAGATCCAAACCACGCAAAACC
AAACAGAAGTGGGTATAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAAAGGGAGTTCACTAAGATGATTGGAGAGTCTTGTAACA
ATCTTAGCCCTGAAGAAAGGATGGTTTATCAAAACATTGGGTTGAAAGACAAGGAAAGATACAAGCGAGAGTTGAAAGAGTATAAGGAGAAAATGAGGCAGCAACCAATG
TTGATGGAGCTAACTATTCAAAACATGGGAGTAGCAGAGGAGGAAGAGAATTCAGCGGTTTTTAGGATGCTCGCTCACAAGTTTGTTCAAAAGTCGGTGGAATCTGATCA
GTACTTGAAGAAAGCAAAAGCAAAAAAATCTTGGTGGCCATTTGGATGGAACAATCAATCATTCAAAGATGAAGAAGAACAATTTTTTAGCCAAGAAGACTGGGAACAAC
TGAACAAATTTATAGGGTACAAGGAAGATGAAAATTCACTGTCCATCATAAACGTTGGCAAAGTGGACACTCTTCTTACTTCTTTGGAGGTTCACATGAACCGTAATGCT
TCAAAGCTTACGGATGAGGCTCAACATTGTCTTGCTGAACTGTCATGTGAAGACCTTAATTGTTCCATGAAATTTTTTCCAGAAACGAAAGTTTTTGATATCAATTTGGG
GTCATATCAACTATCTTCTCCAAGTGGTCTCCTTGCTGTGAGTGCTGCTGTTCATGATTCATTGGTTGGTATCTTCTGTTACAAGCCATTTGATACTAAAGTGGACTGGA
GCTTGGTTGTGAAGGCTTCTCCTTGTTACATGACTTATCTCAAAGATGCCATTGAACAAATTGTGAGCTTCTTTGAGAGCAGCACTGCTGTTGGTCAGACCGTGGTGTTG
GAAACAGCAGCTGCCTTACAGGTCTAA
Protein sequenceShow/hide protein sequence
MTWEQVLKFANLRKRYISLYASLLKSDPTRAIVNDDKHIEELDRELDIELILQWRTKSWNGGLDKHYPPPPTTHNEVISDPIVFWDTLRHFHFMMNTKFMIPVIGGKELD
LHVLYSEVTRRGHVKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPVFVLQAPFSFGSPTSENKLALVEYTPKTTLCSPGPPAEVTGTIDGK
FYWGYLSTNAIVPYTGGRHRYSGRRHRKKGDPNHAKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESCNNLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQQPM
LMELTIQNMGVAEEEENSAVFRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQFFSQEDWEQLNKFIGYKEDENSLSIINVGKVDTLLTSLEVHMNRNA
SKLTDEAQHCLAELSCEDLNCSMKFFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGIFCYKPFDTKVDWSLVVKASPCYMTYLKDAIEQIVSFFESSTAVGQTVVL
ETAAALQV