CuGenDBv2

Gene ID	Clc09G13690
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Golgin subfamily A member 6-like protein 4, putative
Genome location	ClcChr09:14936161..14939096
RNA-Seq Expression	Clc09G13690
Synteny	Clc09G13690
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148363.1 uncharacterized protein LOC101210706 [Cucumis sativus]

3.4e-58

85.53

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIE+YFKPIDKEAE LMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVAS-TLQTDKNQQIQNLASDSTPQKT
        GEER M+DMVKVMQQQAL EKAEAGKV S  LQT+KNQQ QNLASD+TPQKT
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVAS-TLQTDKNQQIQNLASDSTPQKT

XP_008465889.1 PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]

5.0e-62

89.4

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL L+KRLKQAEERKAAIRK+PEQAILGEVRRMVEEMQTLNK LEETESAIE+YFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQNLASDSTPQKT
        GEER+MKDMVKVMQQQALF++AEAGKV +TLQT+KNQQ QNLASD+TPQKT
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQNLASDSTPQKT

XP_022131261.1 uncharacterized protein LOC111004517 [Momordica charantia]

1.2e-63

94.08

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEE+KAA+RKIPEQAILGEVRRMVEEMQTLNKKLEETESAIE+YFKPIDKEAEALMKMQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKV-ASTLQTDKNQQIQNLASDSTPQKT
        GEER MKDMVKVMQQQALFEKAEAGKV  STLQTDKNQ  QNLASD TPQKT
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKV-ASTLQTDKNQQIQNLASDSTPQKT

XP_023532534.1 uncharacterized protein LOC111794666 [Cucurbita pepo subsp. pepo]

7.0e-56

88.65

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MD++LEFGRRALFYV+VLSGYEERRIRSFRLELEKRLK+AEERKAAIR+IPEQAILGEVRRMVEEMQTLNKKLEETESAIE+YFKPIDKE EALM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQN
        GEERTMK+MVKVMQQQAL EK EA KV STLQTDKNQQ Q+
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQN

XP_038886906.1 uncharacterized protein LOC120077104 [Benincasa hispida]

6.7e-67

96.69

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIE+YFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQNLASDSTPQKT
        GEERTMKDMVKVMQQQALFEKAEAGKV STLQTDKNQQ QNLASD+TPQKT
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQNLASDSTPQKT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKE0 Uncharacterized protein

1.6e-58

85.53

Show/hide

Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIE+YFKPIDKEAE LMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVAS-TLQTDKNQQIQNLASDSTPQKT
        GEER M+DMVKVMQQQAL EKAEAGKV S  LQT+KNQQ QNLASD+TPQKT
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVAS-TLQTDKNQQIQNLASDSTPQKT

A0A1S3CPZ1 uncharacterized protein LOC103503473

2.4e-62

89.4

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL L+KRLKQAEERKAAIRK+PEQAILGEVRRMVEEMQTLNK LEETESAIE+YFKPIDKEAEALMK+QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQNLASDSTPQKT
        GEER+MKDMVKVMQQQALF++AEAGKV +TLQT+KNQQ QNLASD+TPQKT
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQNLASDSTPQKT

A0A6J1BQI2 uncharacterized protein LOC111004517

5.8e-64

94.08

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEE+KAA+RKIPEQAILGEVRRMVEEMQTLNKKLEETESAIE+YFKPIDKEAEALMKMQLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKV-ASTLQTDKNQQIQNLASDSTPQKT
        GEER MKDMVKVMQQQALFEKAEAGKV  STLQTDKNQ  QNLASD TPQKT
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKV-ASTLQTDKNQQIQNLASDSTPQKT

A0A6J1H1D7 uncharacterized protein LOC111459545

2.2e-55

87.94

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDK+LEFGRRALFYV+VLSGYEERRIRS RLELEKRLK+AEERKAAIR+IPEQAILGEVRRMVEEMQTLNKKLEETESAIE+YFKPIDKE EALM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQN
        GEERTMK+MVKV+QQQAL EK EA KV STLQTDKNQQ Q+
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQN

A0A6J1K1F5 uncharacterized protein LOC111491540

7.5e-56

88.65

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        MDK+LE GRRALFYV+VLSGYEERRIRSFRLELEKRLK+AEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIE+YFKPIDKE E LM++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQN
        GEERTMK+MVKVMQQQAL EK EA KV STLQTDKNQQ Q+
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVASTLQTDKNQQIQN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G17010.1 unknown protein

9.2e-38

59.57

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Query:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE
        M+KLLE+GR+A+FYVRVLSGYEERRIRS+RL+LEKR++QA +RK  I ++PEQ +L EVRRMVEEMQ LNK++E TE+ IE YFKPIDK A  +M++QLE
Subjt:  MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLE

Query:  GEERTMKDMVKVMQQQALFEKAEAGKVA-----STLQTDKN
        GE++TM  M+   QQ+A+ +  EA K+A     + + TD N
Subjt:  GEERTMKDMVKVMQQQALFEKAEAGKVA-----STLQTDKN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGACAAGCTTTTGGAGTTTGGAAGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAAGAGCGGCGGATTCGATCGTTTAGGTTGGAGCTCGAGAAGCGTCT
CAAACAGGCGGAGGAAAGAAAAGCTGCCATAAGAAAGATACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGTATGGTTGAAGAGATGCAAACTCTAAATAAAAAGTTAG
AGGAAACAGAGTCTGCCATTGAAAAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTAATGAAAATGCAACTTGAAGGAGAAGAGAGAACTATGAAGGACATGGTT
AAAGTTATGCAGCAACAGGCTTTGTTTGAAAAAGCTGAGGCAGGTAAAGTTGCAAGTACTCTTCAAACTGACAAAAATCAGCAAATTCAAAACCTTGCATCTGACTCAAC
CCCTCAAAAAACTTAG

mRNA sequence

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CAAAAATCATCTTTTAAGACCTGAGCTCGATGAAGCCATAATATAAAAGCTTCGAAGCAAAGCGCCACGAGAAAGGGGAAGAAAACACAGCGTCTTGGCAGGAGATCTGT
GTGTTGAATAGCTTGAGGGATTTGGATGGACAAGCTTTTGGAGTTTGGAAGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCCGGCTATGAAGAGCGGCGGATTCGATCGT
TTAGGTTGGAGCTCGAGAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGCTGCCATAAGAAAGATACCAGAACAGGCTATCTTAGGAGAAGTTCGTCGTATGGTTGAAGAG
ATGCAAACTCTAAATAAAAAGTTAGAGGAAACAGAGTCTGCCATTGAAAAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTAATGAAAATGCAACTTGAAGGAGA
AGAGAGAACTATGAAGGACATGGTTAAAGTTATGCAGCAACAGGCTTTGTTTGAAAAAGCTGAGGCAGGTAAAGTTGCAAGTACTCTTCAAACTGACAAAAATCAGCAAA
TTCAAAACCTTGCATCTGACTCAACCCCTCAAAAAACTTAGCTGAGGTAATTCTATGAGAAGTTAGTATGATTTGATTAGATTAATAAAGTTTGTTACTCTGCAATTTTG
GTGCCACCATTGTCTTAAAAATACACTTCACTCTATAGTTGTTGTGATTATAAAGCCCCTTAGTTTTAATTACAGAGGCATTATTGATTATTTCTAGTTTATTATATGAT
AATTTCTTTTACCCAATTCAGATGTATGGATTTGTGATTCTCAACCGCAAGTTTTTCTAGTATGGAATTGTTTCTTCTCTCGTTTCCTTGTATTTATTATCGGTTCGGCG
TTAGTTCGATATTCAAACCAAGCCGAACTGACCCGATTACACCCCCAGCTATGAGTCATATGACTTCCTTTGTGTGAAAAGGATCGTTTCTTCTTGTTTGCTAGCTTTTA
TGCCATTTTATGAGGTGTTTAGGGAG

Protein sequence

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MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQTLNKKLEETESAIEKYFKPIDKEAEALMKMQLEGEERTMKDMV
KVMQQQALFEKAEAGKVASTLQTDKNQQIQNLASDSTPQKT

Clc09G13690 (gene) of Watermelon (cordophanus) v2 genome