| GenBank top hits | e value | %identity | Alignment |
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| KAA0047674.1 gag/pol protein [Cucumis melo var. makuwa] | 5.1e-34 | 57.93 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLVLGI----------------------------------LVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRR
MKDLGE Q+VLGIQIIRD KNK + G+ R ICYAVGIV+RY+SNP DHWTTVK ILKYLRR
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLVLGI----------------------------------LVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRR
Query: MRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
RDYM VYG KDLILTGYTDSDFQ DKDSRKST G VFTLN G +
Subjt: MRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
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| KAA0049624.1 gag/pol protein [Cucumis melo var. makuwa] | 1.0e-34 | 72.9 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTP
MKDLGE Q+VLGIQIIRD + + + R DICYA GIVSRY+SNP DHWT VK ILKYLRR RDYM VYGAKDLILTGYTDS+FQTDKDSRKS
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTP
Query: GLVFTLN
G +FTLN
Subjt: GLVFTLN
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| KAA0061170.1 gag/pol protein [Cucumis melo var. makuwa] | 7.4e-33 | 52.05 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLV-------------------LGIL-----------------------------------------VRSDICYAVG
MKDLGE Q+VLGIQIIRD KNK + G+L R DICYAVG
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLV-------------------LGIL-----------------------------------------VRSDICYAVG
Query: IVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
IVSRY+SNP DHWTTVK ILKYLRR RDYM VYGAKDLILTGYTDSDFQTDKDSRKST G VFTLN G +
Subjt: IVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
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| KAA0062410.1 gag/pol protein [Cucumis melo var. makuwa] | 7.9e-35 | 63.04 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLV---------------------LGILV------RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFV
MKDLGE Q+VLGIQIIRD KNKM + +G L+ R DICYAVGIVSRY+SNP DHWTTVK I KYLRR RDYM V
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLV---------------------LGILV------RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFV
Query: YGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
Y AKDLILTGYTDSDFQTDKDSRKST VFTLN G +
Subjt: YGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
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| TYK00234.1 gag/pol protein [Cucumis melo var. makuwa] | 7.1e-36 | 73.64 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNK---MCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRK
MKDLGE Q+++GIQIIRD KNK + I DICYAVGIV RY+SNP DHWTTVK ILKYL+RMRDYM VYGAKDLILTGYTDSDFQTDKDS+K
Subjt: MKDLGEVQFVLGIQIIRDCKNK---MCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRK
Query: STPGLVFTLN
S G VFTLN
Subjt: STPGLVFTLN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TXG9 Gag/pol protein | 2.5e-34 | 57.93 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLVLGI----------------------------------LVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRR
MKDLGE Q+VLGIQIIRD KNK + G+ R ICYAVGIV+RY+SNP DHWTTVK ILKYLRR
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLVLGI----------------------------------LVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRR
Query: MRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
RDYM VYG KDLILTGYTDSDFQ DKDSRKST G VFTLN G +
Subjt: MRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
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| A0A5A7V1F5 Gag/pol protein | 3.6e-33 | 52.05 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLV-------------------LGIL-----------------------------------------VRSDICYAVG
MKDLGE Q+VLGIQIIRD KNK + G+L R DICYAVG
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLV-------------------LGIL-----------------------------------------VRSDICYAVG
Query: IVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
IVSRY+SNP DHWTTVK ILKYLRR RDYM VYGAKDLILTGYTDSDFQTDKDSRKST G VFTLN G +
Subjt: IVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
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| A0A5D3BLT3 Gag/pol protein | 3.4e-36 | 73.64 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNK---MCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRK
MKDLGE Q+++GIQIIRD KNK + I DICYAVGIV RY+SNP DHWTTVK ILKYL+RMRDYM VYGAKDLILTGYTDSDFQTDKDS+K
Subjt: MKDLGEVQFVLGIQIIRDCKNK---MCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRK
Query: STPGLVFTLN
S G VFTLN
Subjt: STPGLVFTLN
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| A0A5D3CWT1 Gag/pol protein | 5.0e-35 | 72.9 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTP
MKDLGE Q+VLGIQIIRD + + + R DICYA GIVSRY+SNP DHWT VK ILKYLRR RDYM VYGAKDLILTGYTDS+FQTDKDSRKS
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTP
Query: GLVFTLN
G +FTLN
Subjt: GLVFTLN
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| A0A5D3DS50 Gag/pol protein | 3.8e-35 | 63.04 | Show/hide |
Query: MKDLGEVQFVLGIQIIRDCKNKMCLV---------------------LGILV------RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFV
MKDLGE Q+VLGIQIIRD KNKM + +G L+ R DICYAVGIVSRY+SNP DHWTTVK I KYLRR RDYM V
Subjt: MKDLGEVQFVLGIQIIRDCKNKMCLV---------------------LGILV------RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFV
Query: YGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
Y AKDLILTGYTDSDFQTDKDSRKST VFTLN G +
Subjt: YGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A9LYH7 DNA-directed RNA polymerase subunit beta | 9.7e-04 | 87.5 | Show/hide |
Query: RSNGHYALVTQQPLRGRAKQGSGR
RS+GHYALVTQQPLRGRAKQG R
Subjt: RSNGHYALVTQQPLRGRAKQGSGR
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| P0CV72 Secreted RxLR effector protein 161 | 7.0e-10 | 37.21 | Show/hide |
Query: LVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVY-GAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRG
+ L ++ R D+ AVG++S++ S+P HW +K +L+YL+ + Y + A L GY+D+D+ D +SR+ST G +F LN G
Subjt: LVLGILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVY-GAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.6e-14 | 45.78 | Show/hide |
Query: ILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
+ R DI +AVG+VSR+ NP +HW VK IL+YLR +G D IL GYTD+D D D+RKS+ G +FT + G +
Subjt: ILVRSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDYMFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTLNRGTL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.3e-04 | 35.53 | Show/hide |
Query: RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDY-MFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTL
R DI YAV +S++ P +H +K IL+YL ++ +F+ L L Y+D+D+ DKD ST G + L
Subjt: RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDY-MFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.7e-06 | 36.84 | Show/hide |
Query: RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDY-MFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTL
R D+ YAV +S+Y P DHW +K +L+YL D+ +F+ L L Y+D+D+ D D ST G + L
Subjt: RSDICYAVGIVSRYESNPAFDHWTTVKTILKYLRRMRDY-MFVYGAKDLILTGYTDSDFQTDKDSRKSTPGLVFTL
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